RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 TIMP3P35625 211 aa10.93□□□□□ -0.66
CASC4-202ENST00000345795 ZNF726P1Q15940 193 aa10.93□□□□□ -0.66
CASC4-202ENST00000345795 KRTAP27-1Q3LI81 207 aa10.93□□□□□ -0.66
CASC4-202ENST00000345795 SPSB3Q6PJ21 355 aa10.93□□□□□ -0.66
CASC4-202ENST00000345795 BAGE3Q86Y29 109 aa10.93□□□□□ -0.66
CASC4-202ENST00000345795 BAGE2Q86Y30 109 aa10.93□□□□□ -0.66
CASC4-202ENST00000345795 MAPK1IP1LQ8NDC0 245 aa10.93□□□□□ -0.66
CASC4-202ENST00000345795 SGMS2Q8NHU3 365 aa10.93□□□□□ -0.66
CASC4-202ENST00000345795 IMMP2LQ96T52 175 aa10.93□□□□□ -0.66
CASC4-202ENST00000345795 SRRM4A7MD48 611 aaKnown RBP10.93□□□□□ -0.66
CASC4-202ENST00000345795 DLL1O00548 723 aa10.93□□□□□ -0.66
CASC4-202ENST00000345795 KBTBD11O94819 623 aa10.93□□□□□ -0.66
CASC4-202ENST00000345795 TCF23Q7RTU1 214 aa10.93□□□□□ -0.66
CASC4-202ENST00000345795 NPVFQ9HCQ7 196 aa10.93□□□□□ -0.66
CASC4-202ENST00000345795 HCFC1P51610 2035 aa10.92□□□□□ -0.66
CASC4-202ENST00000345795 CGB1A6NKQ9 187 aa10.92□□□□□ -0.66
CASC4-202ENST00000345795 CD33P20138 364 aa10.92□□□□□ -0.66
CASC4-202ENST00000345795 MBNL2Q5VZF2 373 aaKnown RBP10.92□□□□□ -0.66
CASC4-202ENST00000345795 C1orf229Q6ZS94 237 aaPredicted RBP10.92□□□□□ -0.66
CASC4-202ENST00000345795 ZCCHC14Q8WYQ9 949 aaKnown RBP10.92□□□□□ -0.66
CASC4-202ENST00000345795 TRAV20A0A0B4J274 112 aa10.92□□□□□ -0.66
CASC4-202ENST00000345795 DUXBA0A1W2PPF3 345 aa10.92□□□□□ -0.66
CASC4-202ENST00000345795 TCTAP57738 103 aa10.92□□□□□ -0.66
CASC4-202ENST00000345795 HECTD1Q9ULT8 2610 aa10.92□□□□□ -0.66
CASC4-202ENST00000345795 IL3RAP26951 378 aa10.92□□□□□ -0.66
CASC4-202ENST00000345795 TRAT1Q6PIZ9 186 aa10.92□□□□□ -0.66
CASC4-202ENST00000345795 COMMD1Q8N668 190 aa10.92□□□□□ -0.66
CASC4-202ENST00000345795 Q8NA96 180 aa10.92□□□□□ -0.66
CASC4-202ENST00000345795 ZBTB34Q8NCN2 500 aa10.92□□□□□ -0.66
CASC4-202ENST00000345795 OR5AU1Q8NGC0 362 aa10.92□□□□□ -0.66
CASC4-202ENST00000345795 ZNF207O43670 478 aaKnown RBP10.91□□□□□ -0.66
CASC4-202ENST00000345795 PROP1O75360 226 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 MBP02144 154 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 IL6RP08887 468 aaPredicted RBP10.91□□□□□ -0.66
CASC4-202ENST00000345795 KHDC3LQ587J8 217 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 LINC00479Q96M42 142 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 RHOBP62745 196 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 OR8B3Q8NGG8 313 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 OR8B2Q96RD0 313 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 RAB1BQ9H0U4 201 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 HSPB7Q9UBY9 170 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 LOC102723971A0A1B0GUV8 181 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 BTBD17A6NE02 478 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 ZNF98A6NK75 572 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 C15orf62A8K5M9 175 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 SLC25A5P05141 298 aaKnown RBP10.91□□□□□ -0.66
CASC4-202ENST00000345795 UBE2G1P62253 170 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 SERF2P84101 59 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 LY6EQ16553 131 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 Q56UQ5 140 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 PQLC2Q6ZP29 291 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 OR1L8Q8NGR8 309 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 IL22RA2Q969J5 263 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 NABP2Q9BQ15 211 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 CARHSP1Q9Y2V2 147 aaKnown RBP10.91□□□□□ -0.66
CASC4-202ENST00000345795 CRYBG3Q68DQ2 2970 aa10.91□□□□□ -0.66
CASC4-202ENST00000345795 APOBEC3AP31941 199 aaPredicted RBP10.9□□□□□ -0.66
CASC4-202ENST00000345795 ZNF137PP52743 207 aa10.9□□□□□ -0.66
CASC4-202ENST00000345795 TIGITQ495A1 244 aa10.9□□□□□ -0.66
CASC4-202ENST00000345795 TREML4Q6UXN2 200 aa10.9□□□□□ -0.66
CASC4-202ENST00000345795 EIF4E3Q8N5X7 224 aaKnown RBP10.9□□□□□ -0.66
CASC4-202ENST00000345795 A0A1B0GUS0 222 aa10.9□□□□□ -0.66
CASC4-202ENST00000345795 XKRY2A2RUG3 117 aa10.9□□□□□ -0.66
CASC4-202ENST00000345795 IGLV1-44P01699 117 aa10.9□□□□□ -0.66
CASC4-202ENST00000345795 IER3P46695 156 aa10.9□□□□□ -0.66
CASC4-202ENST00000345795 CDSNQ15517 529 aa10.9□□□□□ -0.66
CASC4-202ENST00000345795 KCNIP4Q6PIL6 250 aa10.9□□□□□ -0.66
CASC4-202ENST00000345795 C15orf54Q8N8G6 183 aa10.9□□□□□ -0.66
CASC4-202ENST00000345795 RAB1CQ92928 201 aa10.9□□□□□ -0.66
CASC4-202ENST00000345795 AGMATQ9BSE5 352 aa10.9□□□□□ -0.66
CASC4-202ENST00000345795 C17orf58Q2M2W7 97 aa10.9□□□□□ -0.67
CASC4-202ENST00000345795 CMTM2Q8TAZ6 248 aa10.9□□□□□ -0.67
CASC4-202ENST00000345795 COLCA2A8K830 154 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 C15orf65H3BRN8 121 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 J3QW42 95 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 THBDP07204 575 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 CT45A6P0DMU7 189 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 CT45A5P0DMU8 189 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 CT45A7P0DMV0 189 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 GPR6P46095 362 aaPredicted RBP10.89□□□□□ -0.67
CASC4-202ENST00000345795 GNG5P63218 68 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 DHRS7BQ6IAN0 325 aaPredicted RBP10.89□□□□□ -0.67
CASC4-202ENST00000345795 MARVELD3Q96A59 401 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 PRNDQ9UKY0 176 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 ACAA1P09110 424 aaPredicted RBP10.89□□□□□ -0.67
CASC4-202ENST00000345795 LYL1P12980 280 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 AREGP15514 252 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 PMCHP20382 165 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 GNLYP22749 145 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 GNG4P50150 75 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 SUB1P53999 127 aaKnown RBP eCLIP10.89□□□□□ -0.67
CASC4-202ENST00000345795 NHLH1Q02575 133 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 PMS2P11Q13670 270 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 ZNF672Q499Z4 452 aaPredicted RBP10.89□□□□□ -0.67
CASC4-202ENST00000345795 RITA1Q96K30 269 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 SRD5A3Q9H8P0 318 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 TMEM178BH3BS89 294 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 C1QL4Q86Z23 238 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 Q8TCH9 128 aa10.89□□□□□ -0.67
CASC4-202ENST00000345795 ZNF430Q9H8G1 570 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms