RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 IGHV3OR16-13A0A075B7E8 117 aa12.99□□□□□ -0.33
CARMIL3-201ENST00000342740 IGHV3-74A0A0B4J1X5 117 aa12.99□□□□□ -0.33
CARMIL3-201ENST00000342740 C15orf61A6NNL5 157 aa12.99□□□□□ -0.33
CARMIL3-201ENST00000342740 CGAP01215 116 aa12.99□□□□□ -0.33
CARMIL3-201ENST00000342740 NPPCP23582 126 aa12.99□□□□□ -0.33
CARMIL3-201ENST00000342740 TM4SF20Q53R12 229 aa12.99□□□□□ -0.33
CARMIL3-201ENST00000342740 CD177Q8N6Q3 437 aa12.99□□□□□ -0.33
CARMIL3-201ENST00000342740 OR10J6PQ8NGY7 276 aa12.99□□□□□ -0.33
CARMIL3-201ENST00000342740 TMEM191AQ9H0A3 160 aa12.99□□□□□ -0.33
CARMIL3-201ENST00000342740 CUL9Q8IWT3 2517 aa12.99□□□□□ -0.33
CARMIL3-201ENST00000342740 NUP210Q8TEM1 1887 aaPredicted RBP12.99□□□□□ -0.33
CARMIL3-201ENST00000342740 IGKV3-15P01624 115 aa12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 NBEAP1P0C6P0 100 aa12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 FAM106AQ4KMX7 169 aa12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 TMEM177Q53S58 311 aa12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 DENND4CQ5VZ89 1909 aa12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 SRP19P09132 144 aaKnown RBP12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 COLCA1Q6ZS62 124 aa12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 TMEM144Q7Z5S9 345 aa12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 DTX1Q86Y01 620 aa12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 C7orf69Q9H7B7 122 aa12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 TECTAO75443 2155 aa12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 MLNRO43193 412 aa12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 THBDP07204 575 aa12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 ZNF672Q499Z4 452 aaPredicted RBP12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 GOLT1AQ6ZVE7 132 aa12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 TMEM116Q8NCL8 245 aa12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 EEF1AKMT3Q96AZ1 226 aa12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 CARHSP1Q9Y2V2 147 aaKnown RBP12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 C19orf35Q6ZS72 473 aa12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 TEX29Q8N6K0 151 aa12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 RNASEH2CQ8TDP1 164 aaKnown RBP12.98□□□□□ -0.33
CARMIL3-201ENST00000342740 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.97□□□□□ -0.33
CARMIL3-201ENST00000342740 RAB9AP51151 201 aa12.97□□□□□ -0.33
CARMIL3-201ENST00000342740 FOXA2Q9Y261 457 aaPredicted RBP12.97□□□□□ -0.33
CARMIL3-201ENST00000342740 MGPP08493 103 aa12.97□□□□□ -0.33
CARMIL3-201ENST00000342740 OR9G9P0C7N8 305 aa12.97□□□□□ -0.33
CARMIL3-201ENST00000342740 CD24P25063 80 aa12.97□□□□□ -0.33
CARMIL3-201ENST00000342740 VAMP3Q15836 100 aa12.97□□□□□ -0.33
CARMIL3-201ENST00000342740 CENPWQ5EE01 88 aa12.97□□□□□ -0.33
CARMIL3-201ENST00000342740 Q6P435 159 aa12.97□□□□□ -0.33
CARMIL3-201ENST00000342740 HIST1H2BAQ96A08 127 aa12.97□□□□□ -0.33
CARMIL3-201ENST00000342740 C21orf62Q9NYP8 219 aa12.97□□□□□ -0.33
CARMIL3-201ENST00000342740 FBXL7Q9UJT9 491 aa12.97□□□□□ -0.33
CARMIL3-201ENST00000342740 HLA-DQA1P01909 254 aa12.96□□□□□ -0.33
CARMIL3-201ENST00000342740 CA7P43166 264 aa12.96□□□□□ -0.33
CARMIL3-201ENST00000342740 ASCL4Q6XD76 172 aa12.96□□□□□ -0.33
CARMIL3-201ENST00000342740 PPP1R27Q86WC6 154 aa12.96□□□□□ -0.33
CARMIL3-201ENST00000342740 MSRB2Q9Y3D2 182 aa12.96□□□□□ -0.33
CARMIL3-201ENST00000342740 TCAPO15273 167 aa12.96□□□□□ -0.33
CARMIL3-201ENST00000342740 PSG9Q00887 426 aa12.96□□□□□ -0.33
CARMIL3-201ENST00000342740 DGAT2L7PQ6IED9 249 aa12.96□□□□□ -0.33
CARMIL3-201ENST00000342740 EBLN2Q6P2I7 272 aa12.96□□□□□ -0.33
CARMIL3-201ENST00000342740 HEPN1Q6WQI6 88 aa12.96□□□□□ -0.33
CARMIL3-201ENST00000342740 GOLGB1Q14789 3259 aaKnown RBP12.96□□□□□ -0.33
CARMIL3-201ENST00000342740 TRGV3P03979 118 aa12.96□□□□□ -0.33
CARMIL3-201ENST00000342740 SRSF12Q8WXF0 261 aaKnown RBP12.96□□□□□ -0.33
CARMIL3-201ENST00000342740 ARPC1AQ92747 370 aa12.96□□□□□ -0.33
CARMIL3-201ENST00000342740 VENTXO95231 258 aa12.96□□□□□ -0.34
CARMIL3-201ENST00000342740 IGHV3-23P01764 117 aa12.96□□□□□ -0.34
CARMIL3-201ENST00000342740 RELQ04864 619 aaPredicted RBP12.96□□□□□ -0.34
CARMIL3-201ENST00000342740 SFRP2Q96HF1 295 aa12.96□□□□□ -0.34
CARMIL3-201ENST00000342740 MAP1LC3CQ9BXW4 147 aa12.96□□□□□ -0.34
CARMIL3-201ENST00000342740 WNT10AQ9GZT5 417 aa12.96□□□□□ -0.34
CARMIL3-201ENST00000342740 TWIST1Q15672 202 aa12.95□□□□□ -0.34
CARMIL3-201ENST00000342740 ZNF98A6NK75 572 aa12.95□□□□□ -0.34
CARMIL3-201ENST00000342740 TMEM178BH3BS89 294 aa12.95□□□□□ -0.34
CARMIL3-201ENST00000342740 NBR2O15453 112 aa12.95□□□□□ -0.34
CARMIL3-201ENST00000342740 GPX4P36969 197 aaPredicted RBP12.95□□□□□ -0.34
CARMIL3-201ENST00000342740 ICAM4Q14773 271 aa12.95□□□□□ -0.34
CARMIL3-201ENST00000342740 CLDND2Q8NHS1 167 aa12.95□□□□□ -0.34
CARMIL3-201ENST00000342740 DPRXA6NFQ7 191 aa12.95□□□□□ -0.34
CARMIL3-201ENST00000342740 CFPP27918 469 aa12.95□□□□□ -0.34
CARMIL3-201ENST00000342740 EIF4E3Q8N5X7 224 aaKnown RBP12.95□□□□□ -0.34
CARMIL3-201ENST00000342740 WFDC1Q9HC57 220 aa12.95□□□□□ -0.34
CARMIL3-201ENST00000342740 TRBV6-6A0A0A6YYG2 114 aa12.95□□□□□ -0.34
CARMIL3-201ENST00000342740 TGFAP01135 160 aa12.95□□□□□ -0.34
CARMIL3-201ENST00000342740 PGLYRP4Q96LB8 373 aa12.95□□□□□ -0.34
CARMIL3-201ENST00000342740 HS3ST6Q96QI5 342 aa12.95□□□□□ -0.34
CARMIL3-201ENST00000342740 IGHV3-49A0A0A0MS15 119 aa12.94□□□□□ -0.34
CARMIL3-201ENST00000342740 ATP5G3P48201 142 aa12.94□□□□□ -0.34
CARMIL3-201ENST00000342740 ATRAIDQ6UW56 229 aa12.94□□□□□ -0.34
CARMIL3-201ENST00000342740 MIR17HGQ75NE6 70 aa12.94□□□□□ -0.34
CARMIL3-201ENST00000342740 COQ2Q96H96 371 aa12.94□□□□□ -0.34
CARMIL3-201ENST00000342740 AUP1Q9Y679 476 aa12.94□□□□□ -0.34
CARMIL3-201ENST00000342740 KIAA1671Q9BY89 1806 aa12.94□□□□□ -0.34
CARMIL3-201ENST00000342740 NTF4P34130 210 aa12.94□□□□□ -0.34
CARMIL3-201ENST00000342740 CD81P60033 236 aa12.94□□□□□ -0.34
CARMIL3-201ENST00000342740 MRPL18Q9H0U6 180 aaKnown RBP12.94□□□□□ -0.34
CARMIL3-201ENST00000342740 NMSQ5H8A3 153 aa12.94□□□□□ -0.34
CARMIL3-201ENST00000342740 FAM169BQ8N8A8 192 aa12.94□□□□□ -0.34
CARMIL3-201ENST00000342740 VN1R17PQ8TDU5 208 aa12.94□□□□□ -0.34
CARMIL3-201ENST00000342740 GSX1Q9H4S2 264 aaPredicted RBP12.94□□□□□ -0.34
CARMIL3-201ENST00000342740 NOTCH2Q04721 2471 aa12.94□□□□□ -0.34
CARMIL3-201ENST00000342740 FGF16O43320 207 aa12.93□□□□□ -0.34
CARMIL3-201ENST00000342740 CENPVQ7Z7K6 275 aaPredicted RBP12.93□□□□□ -0.34
CARMIL3-201ENST00000342740 RPRMLQ8N4K4 120 aa12.93□□□□□ -0.34
CARMIL3-201ENST00000342740 OR52E5Q8NH55 327 aa12.93□□□□□ -0.34
CARMIL3-201ENST00000342740 SLC25A33Q9BSK2 321 aa12.93□□□□□ -0.34
CARMIL3-201ENST00000342740 AMY1AP04745 511 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms