RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 A0A1W2PRV1 198 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 C17orf112F2Z3M2 114 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 ZNF343Q6P1L6 599 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 OR51G1Q8NGK1 321 aa12.45□□□□□ -0.42
MBD1-203ENST00000339998 RPUSD4Q96CM3 377 aaKnown RBP12.45□□□□□ -0.42
MBD1-203ENST00000339998 ACTR3CQ9C0K3 210 aaPredicted RBP12.45□□□□□ -0.42
MBD1-203ENST00000339998 LSM4Q9Y4Z0 139 aaKnown RBP12.45□□□□□ -0.42
MBD1-203ENST00000339998 IGHV1-3A0A0C4DH29 117 aa12.44□□□□□ -0.42
MBD1-203ENST00000339998 FOXH1O75593 365 aa12.44□□□□□ -0.42
MBD1-203ENST00000339998 B2MP61769 119 aa12.44□□□□□ -0.42
MBD1-203ENST00000339998 PDPNQ86YL7 162 aa12.44□□□□□ -0.42
MBD1-203ENST00000339998 STPG3Q8N7X2 389 aa12.44□□□□□ -0.42
MBD1-203ENST00000339998 MRPL36Q9P0J6 103 aaKnown RBP12.44□□□□□ -0.42
MBD1-203ENST00000339998 FCN1O00602 326 aa12.44□□□□□ -0.42
MBD1-203ENST00000339998 TIMD4Q96H15 378 aa12.44□□□□□ -0.42
MBD1-203ENST00000339998 ACY3Q96HD9 319 aa12.44□□□□□ -0.42
MBD1-203ENST00000339998 MIOXQ9UGB7 285 aa12.44□□□□□ -0.42
MBD1-203ENST00000339998 ZNF257Q9Y2Q1 563 aa12.44□□□□□ -0.42
MBD1-203ENST00000339998 TAGLN2P37802 199 aaKnown RBP12.43□□□□□ -0.42
MBD1-203ENST00000339998 GAMTQ14353 236 aa12.43□□□□□ -0.42
MBD1-203ENST00000339998 TEPPQ6URK8 271 aa12.43□□□□□ -0.42
MBD1-203ENST00000339998 OR4F5Q8NH21 305 aa12.43□□□□□ -0.42
MBD1-203ENST00000339998 OR4F4Q96R69 305 aa12.43□□□□□ -0.42
MBD1-203ENST00000339998 FBXL15Q9H469 300 aa12.43□□□□□ -0.42
MBD1-203ENST00000339998 SMCO4Q9NRQ5 59 aa12.43□□□□□ -0.42
MBD1-203ENST00000339998 AURKAIP1Q9NWT8 199 aaPredicted RBP12.43□□□□□ -0.42
MBD1-203ENST00000339998 USP9YO00507 2555 aaPredicted RBP12.43□□□□□ -0.42
MBD1-203ENST00000339998 A0A1W2PPI3 338 aa12.43□□□□□ -0.42
MBD1-203ENST00000339998 SNRPCP09234 159 aaKnown RBP12.43□□□□□ -0.42
MBD1-203ENST00000339998 ZNF137PP52743 207 aa12.43□□□□□ -0.42
MBD1-203ENST00000339998 ACOT6Q3I5F7 207 aaPredicted RBP12.43□□□□□ -0.42
MBD1-203ENST00000339998 SMUG1Q53HV7 270 aa12.43□□□□□ -0.42
MBD1-203ENST00000339998 RPEQ96AT9 228 aa12.43□□□□□ -0.42
MBD1-203ENST00000339998 SSBP3Q9BWW4 388 aaPredicted RBP12.43□□□□□ -0.42
MBD1-203ENST00000339998 FNDC4Q9H6D8 234 aaPredicted RBP12.43□□□□□ -0.42
MBD1-203ENST00000339998 A0A1W2PPV4 95 aa12.42□□□□□ -0.42
MBD1-203ENST00000339998 CYB5BO43169 146 aa12.42□□□□□ -0.42
MBD1-203ENST00000339998 LIPFP07098 398 aa12.42□□□□□ -0.42
MBD1-203ENST00000339998 AREGP15514 252 aa12.42□□□□□ -0.42
MBD1-203ENST00000339998 LCN2P80188 198 aa12.42□□□□□ -0.42
MBD1-203ENST00000339998 DTX2Q86UW9 622 aa12.42□□□□□ -0.42
MBD1-203ENST00000339998 OR1L8Q8NGR8 309 aa12.42□□□□□ -0.42
MBD1-203ENST00000339998 OR5B3Q8NH48 314 aa12.42□□□□□ -0.42
MBD1-203ENST00000339998 TMEM167AQ8TBQ9 72 aa12.42□□□□□ -0.42
MBD1-203ENST00000339998 LPAR2Q9HBW0 351 aa12.42□□□□□ -0.42
MBD1-203ENST00000339998 VAX2Q9UIW0 290 aa12.42□□□□□ -0.42
MBD1-203ENST00000339998 ARL14EPLP0DKL9 152 aa12.42□□□□□ -0.42
MBD1-203ENST00000339998 ATP5G3P48201 142 aa12.42□□□□□ -0.42
MBD1-203ENST00000339998 TNXAQ16473 311 aa12.42□□□□□ -0.42
MBD1-203ENST00000339998 HIST1H2BAQ96A08 127 aa12.42□□□□□ -0.42
MBD1-203ENST00000339998 NIPSNAP3BQ9BS92 247 aa12.42□□□□□ -0.42
MBD1-203ENST00000339998 ABCA2Q9BZC7 2435 aa12.42□□□□□ -0.42
MBD1-203ENST00000339998 LOC105371242A0A075B767 164 aa12.42□□□□□ -0.42
MBD1-203ENST00000339998 USF1P22415 310 aaPredicted RBP12.42□□□□□ -0.42
MBD1-203ENST00000339998 PRRX1P54821 245 aa12.42□□□□□ -0.42
MBD1-203ENST00000339998 MEF2BQ02080 365 aaPredicted RBP12.42□□□□□ -0.42
MBD1-203ENST00000339998 CHODLQ9H9P2 273 aa12.42□□□□□ -0.42
MBD1-203ENST00000339998 TIMM23O14925 209 aa12.41□□□□□ -0.42
MBD1-203ENST00000339998 OR10J1P30954 320 aa12.41□□□□□ -0.42
MBD1-203ENST00000339998 OPRK1P41145 380 aa12.41□□□□□ -0.42
MBD1-203ENST00000339998 GPR6P46095 362 aaPredicted RBP12.41□□□□□ -0.42
MBD1-203ENST00000339998 CST9LP1Q5W188 147 aa12.41□□□□□ -0.42
MBD1-203ENST00000339998 SLC35E3Q7Z769 313 aa12.41□□□□□ -0.42
MBD1-203ENST00000339998 C8orf31Q8N9H6 132 aa12.41□□□□□ -0.42
MBD1-203ENST00000339998 OR5T1Q8NG75 326 aa12.41□□□□□ -0.42
MBD1-203ENST00000339998 SSX3Q99909 188 aa12.41□□□□□ -0.42
MBD1-203ENST00000339998 MBP02144 154 aa12.41□□□□□ -0.42
MBD1-203ENST00000339998 NPPCP23582 126 aa12.41□□□□□ -0.42
MBD1-203ENST00000339998 P2RX4Q99571 388 aa12.41□□□□□ -0.42
MBD1-203ENST00000339998 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.41□□□□□ -0.422e-7■■■■□ 21.5
MBD1-203ENST00000339998 LY6G5BQ8NDX9 201 aa12.4□□□□□ -0.42
MBD1-203ENST00000339998 DERL1Q9BUN8 251 aa12.4□□□□□ -0.42
MBD1-203ENST00000339998 SMDT1Q9H4I9 107 aa12.4□□□□□ -0.42
MBD1-203ENST00000339998 LINC00869P0C866 280 aa12.4□□□□□ -0.42
MBD1-203ENST00000339998 IL3RAP26951 378 aa12.4□□□□□ -0.42
MBD1-203ENST00000339998 RAB13P51153 203 aa12.4□□□□□ -0.42
MBD1-203ENST00000339998 SSX2Q16385 188 aa12.4□□□□□ -0.42
MBD1-203ENST00000339998 MIR17HGQ75NE6 70 aa12.4□□□□□ -0.42
MBD1-203ENST00000339998 DYNAPQ8N1N2 210 aa12.4□□□□□ -0.42
MBD1-203ENST00000339998 NEU4Q8WWR8 484 aaPredicted RBP12.4□□□□□ -0.42
MBD1-203ENST00000339998 GGACTQ9BVM4 153 aa12.4□□□□□ -0.42
MBD1-203ENST00000339998 FKBP11Q9NYL4 201 aa12.4□□□□□ -0.42
MBD1-203ENST00000339998 DOK5Q9P104 306 aa12.4□□□□□ -0.42
MBD1-203ENST00000339998 METTL1Q9UBP6 276 aaKnown RBP12.4□□□□□ -0.42
MBD1-203ENST00000339998 MLXQ9UH92 298 aa12.4□□□□□ -0.42
MBD1-203ENST00000339998 ZANQ9Y493 2812 aa12.4□□□□□ -0.42
MBD1-203ENST00000339998 MFAP2P55001 183 aa12.39□□□□□ -0.43
MBD1-203ENST00000339998 PSG5Q15238 335 aa12.39□□□□□ -0.43
MBD1-203ENST00000339998 VMA21Q3ZAQ7 101 aa12.39□□□□□ -0.43
MBD1-203ENST00000339998 TVP23CQ96ET8 276 aa12.39□□□□□ -0.43
MBD1-203ENST00000339998 FAM103A1Q9BTL3 118 aaKnown RBP12.39□□□□□ -0.43
MBD1-203ENST00000339998 BPESC1Q9GZL8 116 aa12.39□□□□□ -0.43
MBD1-203ENST00000339998 GSX1Q9H4S2 264 aaPredicted RBP12.39□□□□□ -0.43
MBD1-203ENST00000339998 ABCA12Q86UK0 2595 aa12.39□□□□□ -0.43
MBD1-203ENST00000339998 PGPEP1LA6NFU8 196 aa12.39□□□□□ -0.43
MBD1-203ENST00000339998 OR2C1O95371 312 aa12.39□□□□□ -0.43
MBD1-203ENST00000339998 MC5RP33032 325 aa12.39□□□□□ -0.43
MBD1-203ENST00000339998 PSMB3P49720 205 aa12.39□□□□□ -0.43
MBD1-203ENST00000339998 ERHP84090 104 aaKnown RBP12.39□□□□□ -0.43
MBD1-203ENST00000339998 BSXQ3C1V8 233 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms