RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 VAMP2P63027 116 aa16.91■□□□□ 0.3
TPM1-204ENST00000334895 DCUN1D4Q92564 292 aa16.91■□□□□ 0.3
TPM1-204ENST00000334895 NOL4LQ96MY1 436 aaPredicted RBP16.91■□□□□ 0.3
TPM1-204ENST00000334895 ECSCRQ19T08 205 aa16.9■□□□□ 0.3
TPM1-204ENST00000334895 Q6ZSV7 163 aa16.9■□□□□ 0.3
TPM1-204ENST00000334895 HSD17B13Q7Z5P4 300 aaPredicted RBP16.9■□□□□ 0.3
TPM1-204ENST00000334895 LYRM2Q9NU23 88 aaPredicted RBP16.9■□□□□ 0.3
TPM1-204ENST00000334895 FAM24AA6NFZ4 105 aa16.89■□□□□ 0.29
TPM1-204ENST00000334895 C15orf62A8K5M9 175 aa16.89■□□□□ 0.29
TPM1-204ENST00000334895 TSC22D2O75157 780 aa16.89■□□□□ 0.29
TPM1-204ENST00000334895 RNASE2P10153 161 aaKnown RBP16.89■□□□□ 0.29
TPM1-204ENST00000334895 CTRB1P17538 263 aa16.89■□□□□ 0.29
TPM1-204ENST00000334895 ERHP84090 104 aaKnown RBP16.89■□□□□ 0.29
TPM1-204ENST00000334895 SPANXN5Q5MJ07 72 aa16.89■□□□□ 0.29
TPM1-204ENST00000334895 CTRB2Q6GPI1 263 aa16.89■□□□□ 0.29
TPM1-204ENST00000334895 SLC24A4Q8NFF2 622 aa16.89■□□□□ 0.29
TPM1-204ENST00000334895 P2RX4Q99571 388 aa16.89■□□□□ 0.29
TPM1-204ENST00000334895 IGSF23A1L1A6 192 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 AP4M1O00189 453 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 P2RY1P47900 373 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 MFAP2P55001 183 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 RPL23AP62750 156 aaKnown RBP16.88■□□□□ 0.29
TPM1-204ENST00000334895 ZFP69Q49AA0 526 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 AKIRIN2Q53H80 203 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 TMEM65Q6PI78 240 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 UNQ5815/PRO19632Q6UWF5 114 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 TTC9CQ8N5M4 171 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 ZNF114Q8NC26 417 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 TNFSF18Q9UNG2 199 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 DMRT1Q9Y5R6 373 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 TRAV41A0A0B4J266 112 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 NPIPB5A8MRT5 1133 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 BOLA2-SMG1P6H3BVE0 249 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 LY86O95711 162 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 CRYGCP07315 174 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 CAV2P51636 162 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 TMEM14EPQ6UXP3 125 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 ZNF580Q9UK33 172 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 U3KQ87 197 aa16.88■□□□□ 0.29
TPM1-204ENST00000334895 SOX15O60248 233 aa16.87■□□□□ 0.29
TPM1-204ENST00000334895 FBXO24O75426 580 aa16.87■□□□□ 0.29
TPM1-204ENST00000334895 TSPAN9O75954 239 aa16.87■□□□□ 0.29
TPM1-204ENST00000334895 IFNA10P01566 189 aa16.87■□□□□ 0.29
TPM1-204ENST00000334895 HKR1P10072 659 aa16.87■□□□□ 0.29
TPM1-204ENST00000334895 NPY1RP25929 384 aa16.87■□□□□ 0.29
TPM1-204ENST00000334895 HTR2BP41595 481 aa16.87■□□□□ 0.29
TPM1-204ENST00000334895 TMEM267Q0VDI3 215 aaPredicted RBP16.87■□□□□ 0.29
TPM1-204ENST00000334895 ZNF546Q86UE3 836 aa16.87■□□□□ 0.29
TPM1-204ENST00000334895 MRPL41Q8IXM3 137 aaKnown RBP16.87■□□□□ 0.29
TPM1-204ENST00000334895 STPG2Q8N412 459 aa16.87■□□□□ 0.29
TPM1-204ENST00000334895 TMEM252Q8N6L7 170 aa16.87■□□□□ 0.29
TPM1-204ENST00000334895 OR5T1Q8NG75 326 aa16.87■□□□□ 0.29
TPM1-204ENST00000334895 STRAPQ9Y3F4 350 aaKnown RBP16.87■□□□□ 0.29
TPM1-204ENST00000334895 RNF222A6NCQ9 220 aa16.86■□□□□ 0.29
TPM1-204ENST00000334895 ARPC5O15511 151 aa16.86■□□□□ 0.29
TPM1-204ENST00000334895 SNCAP37840 140 aa16.86■□□□□ 0.29
TPM1-204ENST00000334895 C2orf83Q53S99 150 aa16.86■□□□□ 0.29
TPM1-204ENST00000334895 PVRIGQ6DKI7 326 aa16.86■□□□□ 0.29
TPM1-204ENST00000334895 NOXA1Q86UR1 476 aa16.86■□□□□ 0.29
TPM1-204ENST00000334895 HAPLN4Q86UW8 402 aa16.86■□□□□ 0.29
TPM1-204ENST00000334895 FAM110DQ8TAY7 271 aaPredicted RBP16.86■□□□□ 0.29
TPM1-204ENST00000334895 WNT10AQ9GZT5 417 aa16.86■□□□□ 0.29
TPM1-204ENST00000334895 SERTAD4Q9NUC0 356 aa16.86■□□□□ 0.29
TPM1-204ENST00000334895 F11RQ9Y624 299 aaKnown RBP16.86■□□□□ 0.29
TPM1-204ENST00000334895 PMS2P5A8MQ11 134 aa16.85■□□□□ 0.29
TPM1-204ENST00000334895 HMSDA8MTL9 139 aa16.85■□□□□ 0.29
TPM1-204ENST00000334895 PRH1P02810 166 aa16.85■□□□□ 0.29
TPM1-204ENST00000334895 METTL15P1P0C7V9 234 aa16.85■□□□□ 0.29
TPM1-204ENST00000334895 PPIFP30405 207 aaKnown RBP16.85■□□□□ 0.29
TPM1-204ENST00000334895 CFHR3Q02985 330 aa16.85■□□□□ 0.29
TPM1-204ENST00000334895 BSCL2Q96G97 398 aaPredicted RBP16.85■□□□□ 0.29
TPM1-204ENST00000334895 TMEM68Q96MH6 324 aa16.85■□□□□ 0.29
TPM1-204ENST00000334895 RPL12P30050 165 aaKnown RBP16.85■□□□□ 0.29
TPM1-204ENST00000334895 NKX2-5P52952 324 aaPredicted RBP16.85■□□□□ 0.29
TPM1-204ENST00000334895 ARL16Q0P5N6 197 aa16.85■□□□□ 0.29
TPM1-204ENST00000334895 OR1P1Q8NH06 330 aa16.85■□□□□ 0.29
TPM1-204ENST00000334895 HYLS1Q96M11 299 aa16.85■□□□□ 0.29
TPM1-204ENST00000334895 AQP10Q96PS8 301 aa16.85■□□□□ 0.29
TPM1-204ENST00000334895 PAIP2BQ9ULR5 123 aaKnown RBP16.85■□□□□ 0.29
TPM1-204ENST00000334895 CST7O76096 145 aa16.84■□□□□ 0.29
TPM1-204ENST00000334895 CRYBA1P05813 215 aa16.84■□□□□ 0.29
TPM1-204ENST00000334895 EWSR1Q01844 656 aaKnown RBP eCLIP16.84■□□□□ 0.29
TPM1-204ENST00000334895 ARSJQ5FYB0 599 aaPredicted RBP16.84■□□□□ 0.29
TPM1-204ENST00000334895 PRSS46E5RG02 174 aa16.83■□□□□ 0.28
TPM1-204ENST00000334895 CXCL2P19875 107 aa16.83■□□□□ 0.28
TPM1-204ENST00000334895 RPP30P78346 268 aaKnown RBP16.83■□□□□ 0.28
TPM1-204ENST00000334895 NHLH2Q02577 135 aa16.83■□□□□ 0.28
TPM1-204ENST00000334895 OR2T6Q8NHC8 308 aa16.83■□□□□ 0.28
TPM1-204ENST00000334895 FANCD2OSQ96PS1 177 aa16.83■□□□□ 0.28
TPM1-204ENST00000334895 ATRQ13535 2644 aa16.83■□□□□ 0.28
TPM1-204ENST00000334895 EIF2B2P49770 351 aaKnown RBP16.82■□□□□ 0.28
TPM1-204ENST00000334895 SULT1A1P50225 295 aa16.82■□□□□ 0.28
TPM1-204ENST00000334895 ATP5IP56385 69 aaPredicted RBP16.82■□□□□ 0.28
TPM1-204ENST00000334895 MFFQ9GZY8 342 aa16.82■□□□□ 0.28
TPM1-204ENST00000334895 IGLV11-55A0A075B6I3 123 aa16.81■□□□□ 0.28
TPM1-204ENST00000334895 OR8U8P0C7N1 319 aa16.81■□□□□ 0.28
TPM1-204ENST00000334895 DEFA4P12838 97 aa16.81■□□□□ 0.28
TPM1-204ENST00000334895 SUB1P53999 127 aaKnown RBP eCLIP16.81■□□□□ 0.28
TPM1-204ENST00000334895 KLK9Q2XQG4 91 aa16.81■□□□□ 0.28
TPM1-204ENST00000334895 LAMTOR1Q6IAA8 161 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms