RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 LCN2P80188 198 aa10.37□□□□□ -0.75
DDX39A-202ENST00000324340 EWSR1Q01844 656 aaKnown RBP eCLIP10.37□□□□□ -0.758e-7■□□□□ 11.3
DDX39A-202ENST00000324340 FAM71F2Q6NXP2 309 aa10.37□□□□□ -0.75
DDX39A-202ENST00000324340 ZNF833PQ6ZTB9 187 aa10.37□□□□□ -0.75
DDX39A-202ENST00000324340 FOXRED2Q8IWF2 684 aa10.37□□□□□ -0.75
DDX39A-202ENST00000324340 LYG1Q8N1E2 194 aa10.37□□□□□ -0.75
DDX39A-202ENST00000324340 OR2C3Q8N628 320 aa10.37□□□□□ -0.75
DDX39A-202ENST00000324340 CYB561D1Q8N8Q1 229 aa10.37□□□□□ -0.75
DDX39A-202ENST00000324340 OR4D5Q8NGN0 318 aa10.37□□□□□ -0.75
DDX39A-202ENST00000324340 OR51H1Q8NH63 302 aa10.37□□□□□ -0.75
DDX39A-202ENST00000324340 C1orf159Q96HA4 380 aa10.37□□□□□ -0.75
DDX39A-202ENST00000324340 CLEC7AQ9BXN2 247 aa10.37□□□□□ -0.75
DDX39A-202ENST00000324340 SIRPDQ9H106 197 aa10.37□□□□□ -0.75
DDX39A-202ENST00000324340 PTPN13Q12923 2485 aa10.37□□□□□ -0.75
DDX39A-202ENST00000324340 NAV2Q8IVL1 2488 aa10.37□□□□□ -0.75
DDX39A-202ENST00000324340 XKRY2A2RUG3 117 aa10.36□□□□□ -0.75
DDX39A-202ENST00000324340 LINC00473A8K010 186 aa10.36□□□□□ -0.75
DDX39A-202ENST00000324340 IFNA1P01562 189 aa10.36□□□□□ -0.75
DDX39A-202ENST00000324340 USF1P22415 310 aaPredicted RBP10.36□□□□□ -0.75
DDX39A-202ENST00000324340 FHITP49789 147 aa10.36□□□□□ -0.75
DDX39A-202ENST00000324340 BRWD1-AS2P59051 145 aa10.36□□□□□ -0.75
DDX39A-202ENST00000324340 ARF6P62330 175 aa10.36□□□□□ -0.75
DDX39A-202ENST00000324340 ZNF585BQ52M93 769 aa10.36□□□□□ -0.75
DDX39A-202ENST00000324340 RPL39P5Q59GN2 51 aa10.36□□□□□ -0.75
DDX39A-202ENST00000324340 PDZD11Q5EBL8 140 aa10.36□□□□□ -0.75
DDX39A-202ENST00000324340 FAM90A2PQ658T7 463 aa10.36□□□□□ -0.75
DDX39A-202ENST00000324340 OR11H6Q8NGC7 330 aa10.36□□□□□ -0.75
DDX39A-202ENST00000324340 MBD3L1Q8WWY6 194 aa10.36□□□□□ -0.75
DDX39A-202ENST00000324340 DDB2Q92466 427 aa10.36□□□□□ -0.75
DDX39A-202ENST00000324340 ST6GALNAC6Q969X2 333 aa10.36□□□□□ -0.75
DDX39A-202ENST00000324340 TMEM186Q96B77 213 aa10.36□□□□□ -0.75
DDX39A-202ENST00000324340 SH3BGRL3Q9H299 93 aa10.36□□□□□ -0.75
DDX39A-202ENST00000324340 ZNF705GA8MUZ8 300 aaPredicted RBP10.35□□□□□ -0.75
DDX39A-202ENST00000324340 M0R1X1 148 aa10.35□□□□□ -0.75
DDX39A-202ENST00000324340 RBFOX2O43251 390 aaKnown RBP eCLIP10.35□□□□□ -0.752e-7■■□□□ 14.5
DDX39A-202ENST00000324340 G0S2P27469 103 aa10.35□□□□□ -0.75
DDX39A-202ENST00000324340 PRRX1P54821 245 aa10.35□□□□□ -0.75
DDX39A-202ENST00000324340 CCL20P78556 96 aa10.35□□□□□ -0.75
DDX39A-202ENST00000324340 HLA-DRB5Q30154 266 aa10.35□□□□□ -0.75
DDX39A-202ENST00000324340 HCP5Q6MZN7 132 aa10.35□□□□□ -0.75
DDX39A-202ENST00000324340 KRTAP1-3Q8IUG1 177 aa10.35□□□□□ -0.75
DDX39A-202ENST00000324340 SELENOHQ8IZQ5 122 aaKnown RBP10.35□□□□□ -0.75
DDX39A-202ENST00000324340 ANAPC16Q96DE5 110 aa10.35□□□□□ -0.75
DDX39A-202ENST00000324340 ADTRPQ96IZ2 230 aa10.35□□□□□ -0.75
DDX39A-202ENST00000324340 S1PR3Q99500 378 aa10.35□□□□□ -0.75
DDX39A-202ENST00000324340 MIEN1Q9BRT3 115 aa10.35□□□□□ -0.75
DDX39A-202ENST00000324340 ZNRD1Q9P1U0 126 aa10.35□□□□□ -0.75
DDX39A-202ENST00000324340 NAT8Q9UHE5 227 aa10.35□□□□□ -0.75
DDX39A-202ENST00000324340 INSIG2Q9Y5U4 225 aa10.35□□□□□ -0.75
DDX39A-202ENST00000324340 URGCP-MRPS24S4R325 110 aa10.35□□□□□ -0.75
DDX39A-202ENST00000324340 AKAP6Q13023 2319 aa10.35□□□□□ -0.75
DDX39A-202ENST00000324340 A0A1W2PPQ1 181 aa10.34□□□□□ -0.75
DDX39A-202ENST00000324340 IGKV1-39P01597 117 aa10.34□□□□□ -0.75
DDX39A-202ENST00000324340 IGKV1D-39P04432 117 aa10.34□□□□□ -0.75
DDX39A-202ENST00000324340 SERPINE2P07093 398 aa10.34□□□□□ -0.75
DDX39A-202ENST00000324340 BCL2P10415 239 aa10.34□□□□□ -0.75
DDX39A-202ENST00000324340 SRP14P37108 136 aaKnown RBP10.34□□□□□ -0.75
DDX39A-202ENST00000324340 THBS3P49746 956 aa10.34□□□□□ -0.75
DDX39A-202ENST00000324340 TAS2R30P59541 319 aa10.34□□□□□ -0.75
DDX39A-202ENST00000324340 LOXL1Q08397 574 aaPredicted RBP10.34□□□□□ -0.75
DDX39A-202ENST00000324340 Q5PR19 223 aa10.34□□□□□ -0.75
DDX39A-202ENST00000324340 NCR3LG1Q68D85 454 aa10.34□□□□□ -0.75
DDX39A-202ENST00000324340 LYZL2Q7Z4W2 148 aa10.34□□□□□ -0.75
DDX39A-202ENST00000324340 ZNF695Q8IW36 515 aa10.34□□□□□ -0.75
DDX39A-202ENST00000324340 OR4P4Q8NGL7 312 aa10.34□□□□□ -0.75
DDX39A-202ENST00000324340 OR10X1Q8NGY0 326 aa10.34□□□□□ -0.75
DDX39A-202ENST00000324340 OR5B12Q96R08 314 aa10.34□□□□□ -0.75
DDX39A-202ENST00000324340 LYRM2Q9NU23 88 aaPredicted RBP10.34□□□□□ -0.75
DDX39A-202ENST00000324340 FKBP11Q9NYL4 201 aa10.34□□□□□ -0.75
DDX39A-202ENST00000324340 RCL1Q9Y2P8 373 aaKnown RBP10.34□□□□□ -0.75
DDX39A-202ENST00000324340 ODF3BA8MYP8 253 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 LY6LH3BQJ8 138 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 BUB1B-PAK6H3BSN5 160 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 RAMP3O60896 148 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 SCGB1D2O95969 90 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 CT45A6P0DMU7 189 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 CT45A5P0DMU8 189 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 CT45A7P0DMV0 189 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 ZNF16P17020 682 aaPredicted RBP10.33□□□□□ -0.76
DDX39A-202ENST00000324340 VDAC1P21796 283 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 IL3RAP26951 378 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 KIR2DS2P43631 304 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 DLX1P56177 255 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 LINC00205P59089 165 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 PAX8Q06710 450 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 ACTL10Q5JWF8 245 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 CYP2G1PQ6ZSU1 146 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 VMO1Q7Z5L0 202 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 THNSL2Q86YJ6 484 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 PNKDQ8N490 385 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 GBGT1Q8N5D6 347 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 DTD1Q8TEA8 209 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 PARD6GQ9BYG4 376 aaPredicted RBP10.33□□□□□ -0.76
DDX39A-202ENST00000324340 ZFP30Q9Y2G7 519 aa10.33□□□□□ -0.76
DDX39A-202ENST00000324340 ARID1AO14497 2285 aa10.32□□□□□ -0.76
DDX39A-202ENST00000324340 B4DSR2 109 aa10.32□□□□□ -0.76
DDX39A-202ENST00000324340 TOX4O94842 621 aa10.32□□□□□ -0.76
DDX39A-202ENST00000324340 MSMBP08118 114 aa10.32□□□□□ -0.76
DDX39A-202ENST00000324340 HOXB4P17483 251 aaPredicted RBP10.32□□□□□ -0.76
DDX39A-202ENST00000324340 NMSQ5H8A3 153 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms