RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 HBG2P69892 147 aa2.59□□□□□ -2
SCAMP1-201ENST00000320280 HOXA4Q00056 320 aaPredicted RBP2.59□□□□□ -2
SCAMP1-201ENST00000320280 HES1Q14469 280 aa2.59□□□□□ -2
SCAMP1-201ENST00000320280 PLGLAQ15195 96 aa2.59□□□□□ -2
SCAMP1-201ENST00000320280 ANKRD55Q3KP44 614 aa2.59□□□□□ -2
SCAMP1-201ENST00000320280 RNASE12Q5GAN4 147 aaKnown RBP2.59□□□□□ -2
SCAMP1-201ENST00000320280 CXorf66Q5JRM2 361 aaPredicted RBP2.59□□□□□ -2
SCAMP1-201ENST00000320280 TMED4Q7Z7H5 227 aa2.59□□□□□ -2
SCAMP1-201ENST00000320280 STPG3Q8N7X2 389 aa2.59□□□□□ -2
SCAMP1-201ENST00000320280 OR1S1Q8NH92 325 aa2.59□□□□□ -2
SCAMP1-201ENST00000320280 C4orf3Q8WVX3 66 aa2.59□□□□□ -2
SCAMP1-201ENST00000320280 MARC2Q969Z3 335 aa2.59□□□□□ -2
SCAMP1-201ENST00000320280 GPR146Q96CH1 333 aa2.59□□□□□ -2
SCAMP1-201ENST00000320280 MCRIP2Q9BUT9 160 aaKnown RBP2.59□□□□□ -2
SCAMP1-201ENST00000320280 ZNF436Q9C0F3 470 aaPredicted RBP2.59□□□□□ -2
SCAMP1-201ENST00000320280 ZNF430Q9H8G1 570 aaPredicted RBP2.59□□□□□ -2
SCAMP1-201ENST00000320280 APCP25054 2843 aa2.59□□□□□ -2
SCAMP1-201ENST00000320280 BOD1L1Q8NFC6 3051 aa2.59□□□□□ -2
SCAMP1-201ENST00000320280 IGLV11-55A0A075B6I3 123 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 A0A0D9SG52 128 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 TEX50A0A1B0GTY4 177 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 IGLC7A0M8Q6 106 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 INAFM1C9JVW0 142 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 SSNA1O43805 119 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 MBPP02686 304 aaPredicted RBP2.58□□□□□ -2
SCAMP1-201ENST00000320280 AMY1AP04745 511 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 PSMB8P28062 276 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 CDX1P47902 265 aaPredicted RBP2.58□□□□□ -2
SCAMP1-201ENST00000320280 SELENOTP62341 195 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 OR2F1Q13607 317 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 FXYD3Q14802 87 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 OR8G2PQ6IF36 304 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 TMEM14EPQ6UXP3 125 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 BRD3OSQ6XYD6 125 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 THAP8Q8NA92 274 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 EEF1AKMT3Q96AZ1 226 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 AQP10Q96PS8 301 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 LYRM2Q9NU23 88 aaPredicted RBP2.58□□□□□ -2
SCAMP1-201ENST00000320280 MGAT4CQ9UBM8 478 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 TSSC4Q9Y5U2 329 aaPredicted RBP2.58□□□□□ -2
SCAMP1-201ENST00000320280 ZNF469Q96JG9 3925 aaPredicted RBP2.58□□□□□ -2
SCAMP1-201ENST00000320280 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.58□□□□□ -2
SCAMP1-201ENST00000320280 PSMB11A5LHX3 300 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 WRBO00258 174 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 SLC25A17O43808 307 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 CHST1O43916 411 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 NDUFB8O95169 186 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 IGHV4-59P01825 116 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 IGKV1-16P04430 117 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 ANXA7P20073 488 aaKnown RBP2.58□□□□□ -2
SCAMP1-201ENST00000320280 S100A11P31949 105 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 MYCNOSP40205 109 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 HOXA1P49639 335 aaPredicted RBP2.58□□□□□ -2
SCAMP1-201ENST00000320280 CMC4P56277 68 aaPredicted RBP2.58□□□□□ -2
SCAMP1-201ENST00000320280 PROK1P58294 105 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 CX3CL1P78423 397 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 RELQ04864 619 aaPredicted RBP2.58□□□□□ -2
SCAMP1-201ENST00000320280 IAH1Q2TAA2 248 aaPredicted RBP2.58□□□□□ -2
SCAMP1-201ENST00000320280 STX12Q86Y82 276 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 ARL6IP6Q8N6S5 226 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 SPATA3Q8NHX4 192 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 DTD1Q8TEA8 209 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 LEAP2Q969E1 77 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 BSCL2Q96G97 398 aaPredicted RBP2.58□□□□□ -2
SCAMP1-201ENST00000320280 SLC35E1Q96K37 410 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 GPR82Q96P67 336 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 TMEM231Q9H6L2 316 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 CLEC5AQ9NY25 188 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 CACNG5Q9UF02 275 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 STRAPQ9Y3F4 350 aaKnown RBP2.58□□□□□ -2
SCAMP1-201ENST00000320280 A0A0B4J293 547 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 K7EMT4 169 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 L7N2F9 121 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 RAMP3O60896 148 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 LGALS1P09382 135 aaKnown RBP2.58□□□□□ -2
SCAMP1-201ENST00000320280 ZP3P21754 424 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 NPY1RP25929 384 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 INSL3P51460 131 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 PLP1P60201 277 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 YPEL3P61236 119 aaPredicted RBP2.58□□□□□ -2
SCAMP1-201ENST00000320280 VAMP2P63027 116 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 FHL2Q14192 279 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 ZNF266Q14584 549 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 TNXAQ16473 311 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 ANKRD39Q53RE8 183 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 FAAP20Q6NZ36 180 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 ZNF343Q6P1L6 599 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 DPPA3Q6W0C5 159 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 Q6ZSV7 163 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 UBAC2Q8NBM4 344 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 TMEM116Q8NCL8 245 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 OR4X1Q8NH49 305 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 LHFPL5Q8TAF8 219 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 THAP6Q8TBB0 222 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 HYLS1Q96M11 299 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 TRGV9Q99603 122 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 ELOVL1Q9BW60 279 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 CHIAQ9BZP6 476 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 SERTAD4Q9NUC0 356 aa2.58□□□□□ -2
SCAMP1-201ENST00000320280 SPTAN1Q13813 2472 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms