RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 ZNF727A8MUV8 499 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 SLC25A48Q6ZT89 311 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 SVBPQ8N300 66 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 TXNDC17Q9BRA2 123 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 LEPP41159 167 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 SUPT4H1P63272 117 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 PSMG3Q9BT73 122 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 ARID1AO14497 2285 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 SEC14L6B5MCN3 397 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 TGOLN2O43493 480 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 OR10J1P30954 320 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 HLA-DRB5Q30154 266 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 LDLRAD2Q5SZI1 272 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 AMMECR1LQ6DCA0 310 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 USMG5Q96IX5 58 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 TMEM204Q9BSN7 226 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 PAXXQ9BUH6 204 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 FBXL15Q9H469 300 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 YTHDF2Q9Y5A9 579 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 H7BYZ3 331 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 GATCO43716 136 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 CXorf1O96002 111 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 FCER1GP30273 86 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 RPS20P60866 119 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 B2MP61769 119 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 CD69Q07108 199 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 ATG101Q9BSB4 218 aa7.05□□□□□ -1.28
PDLIM5-201ENST00000317968 H3BUX3 64 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 AREGP15514 252 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 DLK1P80370 383 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 RIGQ13278 110 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 TPTE2P1Q5T6R2 138 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 FAM78BQ5VT40 261 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 BAGE3Q86Y29 109 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 BAGE2Q86Y30 109 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 C5orf17Q8NAS9 161 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 BEND2Q8NDZ0 799 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 BET1LQ9NYM9 111 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 TCF19Q9Y242 345 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 ACACBO00763 2458 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 LINC00862A6NCI5 91 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 ERVFC1-1P60608 527 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 FAM201AQ5SY85 155 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 STPG2Q8N412 459 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 FGF23Q9GZV9 251 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 ABCA4P78363 2273 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 IGHV3-21A0A0B4J1V1 117 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 WIPF3A6NGB9 483 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 GGCTO75223 188 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 IGHV1-8P0DP01 117 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 PLCE1Q9P212 2302 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 CACNA1AO00555 2505 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 PKDREJQ9NTG1 2253 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 ZNF705GA8MUZ8 300 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 PRTN3P24158 256 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 FCGR2BP31994 310 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 SMIM7Q9BQ49 75 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 ELOA3CA0A087WX78 387 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 HKR1P10072 659 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 LYL1P12980 280 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 UBE2E1P51965 193 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 RND2P52198 227 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 USF2Q15853 346 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 NMSQ5H8A3 153 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 ZNF429Q86V71 674 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 OR4D5Q8NGN0 318 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 C1QTNF4Q9BXJ3 329 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 CTDSP1Q9GZU7 261 aa7.04□□□□□ -1.28
PDLIM5-201ENST00000317968 PTPRBP23467 1997 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 CEP295Q9C0D2 2601 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 MFSD2BA6NFX1 497 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 OR9G9P0C7N8 305 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 CXCL2P19875 107 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 CD300CQ08708 224 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 PSG5Q15238 335 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 LHFPL5Q8TAF8 219 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 CACNG8Q8WXS5 425 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 RPRMQ9NS64 109 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 IGHV2-26A0A0B4J1V2 119 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 IGHV1-69DA0A0B4J2H0 117 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 MAP1LC3B2A6NCE7 125 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 J3KRW8 73 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 IGHV1-69P01742 117 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 SULT1A2P50226 295 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 LCN12Q6JVE5 192 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 SRSF8Q9BRL6 282 aaKnown RBP7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 MAP1LC3BQ9GZQ8 125 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 CD1BP29016 333 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 HERPUD1Q15011 391 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 FA2HQ7L5A8 372 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 ZNF439Q8NDP4 499 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 CLDND2Q8NHS1 167 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 TMEM167AQ8TBQ9 72 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 HSPB7Q9UBY9 170 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 IGHV2-70DA0A0C4DH43 119 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 FAM223BA6NKX1 122 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 GPX1P07203 203 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 TMEM200BQ69YZ2 307 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 FAM223AQ8IWN6 122 aa7.03□□□□□ -1.28
PDLIM5-201ENST00000317968 LEAP2Q969E1 77 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms