RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 CACNA1AO00555 2505 aa10.13□□□□□ -0.79
RNF4-201ENST00000314289 CELSR1Q9NYQ6 3014 aa10.13□□□□□ -0.79
RNF4-201ENST00000314289 SOX15O60248 233 aa10.13□□□□□ -0.79
RNF4-201ENST00000314289 PFN1P07737 140 aaKnown RBP10.13□□□□□ -0.79
RNF4-201ENST00000314289 THBS3P49746 956 aa10.13□□□□□ -0.79
RNF4-201ENST00000314289 TMEM41BQ5BJD5 291 aa10.13□□□□□ -0.79
RNF4-201ENST00000314289 CORO2AQ92828 525 aa10.13□□□□□ -0.79
RNF4-201ENST00000314289 PINX1Q96BK5 328 aaKnown RBP10.13□□□□□ -0.79
RNF4-201ENST00000314289 NOL4LQ96MY1 436 aaPredicted RBP10.13□□□□□ -0.79
RNF4-201ENST00000314289 CRYBG3Q68DQ2 2970 aa10.12□□□□□ -0.79
RNF4-201ENST00000314289 MBD3L1Q8WWY6 194 aa10.12□□□□□ -0.79
RNF4-201ENST00000314289 RAB24Q969Q5 203 aa10.12□□□□□ -0.79
RNF4-201ENST00000314289 P2RX4Q99571 388 aa10.12□□□□□ -0.79
RNF4-201ENST00000314289 PSMG3Q9BT73 122 aaPredicted RBP10.12□□□□□ -0.79
RNF4-201ENST00000314289 CBLN4Q9NTU7 201 aa10.12□□□□□ -0.79
RNF4-201ENST00000314289 CACNA1BQ00975 2339 aa10.12□□□□□ -0.79
RNF4-201ENST00000314289 UTP20O75691 2785 aaKnown RBP10.12□□□□□ -0.79
RNF4-201ENST00000314289 B9A039 149 aa10.12□□□□□ -0.79
RNF4-201ENST00000314289 RBFOX2O43251 390 aaKnown RBP eCLIP10.12□□□□□ -0.79
RNF4-201ENST00000314289 CD1BP29016 333 aa10.12□□□□□ -0.79
RNF4-201ENST00000314289 VDAC2P45880 294 aaPredicted RBP10.12□□□□□ -0.79
RNF4-201ENST00000314289 RPL23P62829 140 aaKnown RBP10.12□□□□□ -0.79
RNF4-201ENST00000314289 MEF2BQ02080 365 aaPredicted RBP10.12□□□□□ -0.79
RNF4-201ENST00000314289 MOB3BQ86TA1 216 aa10.12□□□□□ -0.79
RNF4-201ENST00000314289 OR10G9Q8NGN4 311 aa10.12□□□□□ -0.79
RNF4-201ENST00000314289 OR10G7Q8NGN6 311 aa10.12□□□□□ -0.79
RNF4-201ENST00000314289 OR4F5Q8NH21 305 aa10.12□□□□□ -0.79
RNF4-201ENST00000314289 RNASEH2CQ8TDP1 164 aaKnown RBP10.12□□□□□ -0.79
RNF4-201ENST00000314289 IGFBPL1Q8WX77 278 aa10.12□□□□□ -0.79
RNF4-201ENST00000314289 OR4F4Q96R69 305 aa10.12□□□□□ -0.79
RNF4-201ENST00000314289 ACTR3CQ9C0K3 210 aaPredicted RBP10.12□□□□□ -0.79
RNF4-201ENST00000314289 PATZ1Q9HBE1 687 aaKnown RBP10.12□□□□□ -0.79
RNF4-201ENST00000314289 RAB9BQ9NP90 201 aa10.12□□□□□ -0.79
RNF4-201ENST00000314289 C15orf61A6NNL5 157 aa10.11□□□□□ -0.79
RNF4-201ENST00000314289 PAX1P15863 534 aa10.11□□□□□ -0.79
RNF4-201ENST00000314289 GNB2P62879 340 aa10.11□□□□□ -0.79
RNF4-201ENST00000314289 SERF2P84101 59 aa10.11□□□□□ -0.79
RNF4-201ENST00000314289 CYP2G1PQ6ZSU1 146 aa10.11□□□□□ -0.79
RNF4-201ENST00000314289 ZNF709Q8N972 641 aa10.11□□□□□ -0.79
RNF4-201ENST00000314289 OR10W1Q8NGF6 305 aa10.11□□□□□ -0.79
RNF4-201ENST00000314289 OR51G1Q8NGK1 321 aa10.11□□□□□ -0.79
RNF4-201ENST00000314289 SSMEM1Q8WWF3 244 aa10.11□□□□□ -0.79
RNF4-201ENST00000314289 NCOR1P1Q9H4R4 102 aa10.11□□□□□ -0.79
RNF4-201ENST00000314289 AURKAIP1Q9NWT8 199 aaPredicted RBP10.11□□□□□ -0.79
RNF4-201ENST00000314289 SCGB1D1O95968 90 aa10.11□□□□□ -0.79
RNF4-201ENST00000314289 NUTF2P61970 127 aaKnown RBP10.11□□□□□ -0.79
RNF4-201ENST00000314289 LBHQ53QV2 105 aaPredicted RBP10.11□□□□□ -0.79
RNF4-201ENST00000314289 PARLQ9H300 379 aa10.11□□□□□ -0.79
RNF4-201ENST00000314289 OR51B2Q9Y5P1 312 aa10.11□□□□□ -0.79
RNF4-201ENST00000314289 ZFHX3Q15911 3703 aa10.11□□□□□ -0.79
RNF4-201ENST00000314289 IGSF10Q6WRI0 2623 aa10.11□□□□□ -0.79
RNF4-201ENST00000314289 TNFRSF13BO14836 293 aaPredicted RBP10.1□□□□□ -0.79
RNF4-201ENST00000314289 SAA1P0DJI8 122 aaPredicted RBP10.1□□□□□ -0.79
RNF4-201ENST00000314289 MLANAQ16655 118 aa10.1□□□□□ -0.79
RNF4-201ENST00000314289 RITA1Q96K30 269 aa10.1□□□□□ -0.79
RNF4-201ENST00000314289 NEU1Q99519 415 aa10.1□□□□□ -0.79
RNF4-201ENST00000314289 A0A1B0GUS0 222 aa10.1□□□□□ -0.79
RNF4-201ENST00000314289 KBTBD11O94819 623 aa10.1□□□□□ -0.79
RNF4-201ENST00000314289 CA2P00918 260 aa10.1□□□□□ -0.79
RNF4-201ENST00000314289 CHRNA7P36544 502 aa10.1□□□□□ -0.79
RNF4-201ENST00000314289 UQCRFS1P47985 274 aa10.1□□□□□ -0.79
RNF4-201ENST00000314289 TMEM18Q96B42 140 aa10.1□□□□□ -0.79
RNF4-201ENST00000314289 HARBI1Q96MB7 349 aa10.1□□□□□ -0.79
RNF4-201ENST00000314289 LINC00574Q9H8X3 128 aa10.1□□□□□ -0.79
RNF4-201ENST00000314289 E7EUB6 86 aa10.1□□□□□ -0.79
RNF4-201ENST00000314289 J3QR06 171 aa10.1□□□□□ -0.79
RNF4-201ENST00000314289 GCGP01275 180 aa10.1□□□□□ -0.79
RNF4-201ENST00000314289 APELAP0DMC3 54 aa10.1□□□□□ -0.79
RNF4-201ENST00000314289 KIR2DS2P43631 304 aa10.1□□□□□ -0.79
RNF4-201ENST00000314289 PSMB3P49720 205 aa10.1□□□□□ -0.79
RNF4-201ENST00000314289 FAM3BP58499 235 aaPredicted RBP10.1□□□□□ -0.79
RNF4-201ENST00000314289 MEF2CQ06413 473 aaPredicted RBP10.1□□□□□ -0.79
RNF4-201ENST00000314289 RTL8BQ17RB0 113 aa10.1□□□□□ -0.79
RNF4-201ENST00000314289 C10orf55Q5SWW7 151 aa10.1□□□□□ -0.79
RNF4-201ENST00000314289 TREML4Q6UXN2 200 aa10.1□□□□□ -0.79
RNF4-201ENST00000314289 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.1□□□□□ -0.79
RNF4-201ENST00000314289 ITGB1BP1O14713 200 aa10.09□□□□□ -0.79
RNF4-201ENST00000314289 HRASP01112 189 aa10.09□□□□□ -0.79
RNF4-201ENST00000314289 IGHV3-48P01763 117 aa10.09□□□□□ -0.79
RNF4-201ENST00000314289 HSPE1P61604 102 aaKnown RBP10.09□□□□□ -0.79
RNF4-201ENST00000314289 ZNF672Q499Z4 452 aaPredicted RBP10.09□□□□□ -0.79
RNF4-201ENST00000314289 MIC13Q5XKP0 118 aa10.09□□□□□ -0.79
RNF4-201ENST00000314289 TEX38Q6PEX7 206 aa10.09□□□□□ -0.79
RNF4-201ENST00000314289 SNHG12Q9BXW3 62 aa10.09□□□□□ -0.79
RNF4-201ENST00000314289 TMEM14BQ9NUH8 114 aa10.09□□□□□ -0.79
RNF4-201ENST00000314289 ENSAO43768 121 aaKnown RBP10.09□□□□□ -0.79
RNF4-201ENST00000314289 ATP6V1FQ16864 119 aa10.09□□□□□ -0.79
RNF4-201ENST00000314289 Q8N7P7 452 aa10.09□□□□□ -0.79
RNF4-201ENST00000314289 SLC24A4Q8NFF2 622 aa10.09□□□□□ -0.79
RNF4-201ENST00000314289 ENY2Q9NPA8 101 aa10.09□□□□□ -0.79
RNF4-201ENST00000314289 MYO18BQ8IUG5 2567 aa10.09□□□□□ -0.79
RNF4-201ENST00000314289 COX7A1P24310 79 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 NPY1RP25929 384 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 EFNB3Q15768 340 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 OR2T10Q8NGZ9 312 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 H0YJW9 148 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 DLL1O00548 723 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 UBE2G2P60604 165 aa10.08□□□□□ -0.8
RNF4-201ENST00000314289 ARSJQ5FYB0 599 aaPredicted RBP10.08□□□□□ -0.8
RNF4-201ENST00000314289 ZNF833PQ6ZTB9 187 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms