RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 PMCHL1Q16048 86 aa11.04□□□□□ -0.64
CCDC13-201ENST00000310232 KIR3DL3Q8N743 410 aa11.04□□□□□ -0.64
CCDC13-201ENST00000310232 OR9G1Q8NH87 305 aa11.04□□□□□ -0.64
CCDC13-201ENST00000310232 S1PR3Q99500 378 aa11.04□□□□□ -0.64
CCDC13-201ENST00000310232 SFXN3Q9BWM7 321 aa11.04□□□□□ -0.64
CCDC13-201ENST00000310232 LINC00869P0C866 280 aa11.04□□□□□ -0.64
CCDC13-201ENST00000310232 ERVK-16P61578 105 aa11.04□□□□□ -0.64
CCDC13-201ENST00000310232 RHOBP62745 196 aa11.04□□□□□ -0.64
CCDC13-201ENST00000310232 OR4A47Q6IF82 309 aa11.04□□□□□ -0.64
CCDC13-201ENST00000310232 SLC24A4Q8NFF2 622 aa11.04□□□□□ -0.64
CCDC13-201ENST00000310232 OR10W1Q8NGF6 305 aa11.04□□□□□ -0.64
CCDC13-201ENST00000310232 ZNF586Q9NXT0 402 aa11.04□□□□□ -0.64
CCDC13-201ENST00000310232 CDC42EP3Q9UKI2 254 aa11.04□□□□□ -0.64
CCDC13-201ENST00000310232 M0QZK8 103 aa11.03□□□□□ -0.64
CCDC13-201ENST00000310232 SSBP2P81877 361 aaPredicted RBP11.03□□□□□ -0.64
CCDC13-201ENST00000310232 MRPL49Q13405 166 aaKnown RBP11.03□□□□□ -0.64
CCDC13-201ENST00000310232 PRR27Q6MZM9 219 aa11.03□□□□□ -0.64
CCDC13-201ENST00000310232 VHLLQ6RSH7 139 aa11.03□□□□□ -0.64
CCDC13-201ENST00000310232 C1orf174Q8IYL3 243 aa11.03□□□□□ -0.64
CCDC13-201ENST00000310232 TRIB1Q96RU8 372 aa11.03□□□□□ -0.64
CCDC13-201ENST00000310232 NABP2Q9BQ15 211 aa11.03□□□□□ -0.64
CCDC13-201ENST00000310232 TRGV5A0A0B4J1U4 118 aa11.03□□□□□ -0.64
CCDC13-201ENST00000310232 A8MXE2 369 aa11.03□□□□□ -0.64
CCDC13-201ENST00000310232 PLAUP00749 431 aa11.03□□□□□ -0.64
CCDC13-201ENST00000310232 OR5G3P0C626 314 aa11.03□□□□□ -0.64
CCDC13-201ENST00000310232 RNASE8Q8TDE3 154 aaKnown RBP11.03□□□□□ -0.64
CCDC13-201ENST00000310232 SLC35E1Q96K37 410 aa11.03□□□□□ -0.64
CCDC13-201ENST00000310232 PIEZO2Q9H5I5 2752 aa11.03□□□□□ -0.64
CCDC13-201ENST00000310232 SAA2-SAA4A0A096LPE2 208 aa11.02□□□□□ -0.64
CCDC13-201ENST00000310232 CCL25O15444 150 aa11.02□□□□□ -0.64
CCDC13-201ENST00000310232 IGLV2-8P01709 118 aa11.02□□□□□ -0.64
CCDC13-201ENST00000310232 IGKV1-16P04430 117 aa11.02□□□□□ -0.64
CCDC13-201ENST00000310232 CECR9P0C854 216 aa11.02□□□□□ -0.64
CCDC13-201ENST00000310232 SAA2P0DJI9 122 aaPredicted RBP11.02□□□□□ -0.64
CCDC13-201ENST00000310232 ESDP10768 282 aa11.02□□□□□ -0.64
CCDC13-201ENST00000310232 DUSP3P51452 185 aaPredicted RBP11.02□□□□□ -0.64
CCDC13-201ENST00000310232 LOXL3P58215 753 aa11.02□□□□□ -0.64
CCDC13-201ENST00000310232 SPATA12Q7Z6I5 190 aa11.02□□□□□ -0.64
CCDC13-201ENST00000310232 DEFB108BQ8NET1 73 aa11.02□□□□□ -0.64
CCDC13-201ENST00000310232 TSKUQ8WUA8 353 aa11.02□□□□□ -0.64
CCDC13-201ENST00000310232 RND1Q92730 232 aa11.02□□□□□ -0.64
CCDC13-201ENST00000310232 ZNF355PQ9NSJ1 428 aa11.02□□□□□ -0.64
CCDC13-201ENST00000310232 RAI1Q7Z5J4 1906 aaPredicted RBP11.02□□□□□ -0.65
CCDC13-201ENST00000310232 TRGV10A0A0A0MS01 117 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 MMP23AO75900 390 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 CER1O95813 267 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 IGLC2P0DOY2 106 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 IGLC3P0DOY3 106 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 PYYP10082 97 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 Q0VG73 95 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 SRSF6Q13247 344 aaKnown RBP11.02□□□□□ -0.65
CCDC13-201ENST00000310232 GABRA6Q16445 453 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 GDF5OSQ5U4N7 250 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 FAM90A1Q86YD7 464 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 LYG1Q8N1E2 194 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 MCRIP2Q9BUT9 160 aaKnown RBP11.02□□□□□ -0.65
CCDC13-201ENST00000310232 TECRQ9NZ01 308 aaKnown RBP11.02□□□□□ -0.65
CCDC13-201ENST00000310232 DCHS2Q6V1P9 2916 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 ASH1LQ9NR48 2969 aaKnown RBP11.02□□□□□ -0.65
CCDC13-201ENST00000310232 CORTO00230 105 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 MPDU1O75352 247 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 CX3CL1P78423 397 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 SMIM21Q3B7S5 101 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 Q56UQ5 140 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 COL5A1-AS1Q5SY13 56 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 IBA57Q5T440 356 aaKnown RBP11.02□□□□□ -0.65
CCDC13-201ENST00000310232 OR52E5Q8NH55 327 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 KCNS1Q96KK3 526 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 CLEC7AQ9BXN2 247 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 CXXC4Q9H2H0 198 aa11.02□□□□□ -0.65
CCDC13-201ENST00000310232 SPTBN2O15020 2390 aa11.01□□□□□ -0.65
CCDC13-201ENST00000310232 ZNF324O75467 553 aaPredicted RBP11.01□□□□□ -0.65
CCDC13-201ENST00000310232 HNRNPA3P51991 378 aaKnown RBP11.01□□□□□ -0.65
CCDC13-201ENST00000310232 RPL8P62917 257 aaKnown RBP11.01□□□□□ -0.65
CCDC13-201ENST00000310232 CT45A1Q5HYN5 189 aa11.01□□□□□ -0.65
CCDC13-201ENST00000310232 CT45A3Q8NHU0 189 aa11.01□□□□□ -0.65
CCDC13-201ENST00000310232 DPRXA6NFQ7 191 aa11.01□□□□□ -0.65
CCDC13-201ENST00000310232 SRRM4A7MD48 611 aaKnown RBP11.01□□□□□ -0.65
CCDC13-201ENST00000310232 CAMPP49913 170 aa11.01□□□□□ -0.65
CCDC13-201ENST00000310232 PRR20EP86478 221 aa11.01□□□□□ -0.65
CCDC13-201ENST00000310232 PRR20CP86479 221 aa11.01□□□□□ -0.65
CCDC13-201ENST00000310232 PRR20DP86480 221 aa11.01□□□□□ -0.65
CCDC13-201ENST00000310232 PRR20BP86481 221 aa11.01□□□□□ -0.65
CCDC13-201ENST00000310232 PRR20AP86496 221 aa11.01□□□□□ -0.65
CCDC13-201ENST00000310232 RELQ04864 619 aaPredicted RBP11.01□□□□□ -0.65
CCDC13-201ENST00000310232 TNXAQ16473 311 aa11.01□□□□□ -0.65
CCDC13-201ENST00000310232 TMEM249Q2WGJ8 235 aa11.01□□□□□ -0.65
CCDC13-201ENST00000310232 RNF2Q99496 336 aa11.01□□□□□ -0.65
CCDC13-201ENST00000310232 PLEKHA3Q9HB20 300 aa11.01□□□□□ -0.65
CCDC13-201ENST00000310232 CLEC5AQ9NY25 188 aa11.01□□□□□ -0.65
CCDC13-201ENST00000310232 LAMTOR2Q9Y2Q5 125 aa11.01□□□□□ -0.65
CCDC13-201ENST00000310232 C15orf61A6NNL5 157 aa11□□□□□ -0.65
CCDC13-201ENST00000310232 C11orf52Q96A22 123 aa11□□□□□ -0.65
CCDC13-201ENST00000310232 GNB1LQ9BYB4 327 aa11□□□□□ -0.65
CCDC13-201ENST00000310232 IDI2-AS1Q9NZ38 188 aa11□□□□□ -0.65
CCDC13-201ENST00000310232 USF1P22415 310 aaPredicted RBP11□□□□□ -0.65
CCDC13-201ENST00000310232 GAGE1Q13065 139 aa11□□□□□ -0.65
CCDC13-201ENST00000310232 WDR31Q8NA23 367 aa11□□□□□ -0.65
CCDC13-201ENST00000310232 OR4B1Q8NGF8 309 aa11□□□□□ -0.65
CCDC13-201ENST00000310232 OR2T6Q8NHC8 308 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms