RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 AKIRIN2Q53H80 203 aa17.08■□□□□ 0.33
ATG4D-201ENST00000309469 CCL19Q99731 98 aa17.08■□□□□ 0.33
ATG4D-201ENST00000309469 AWAT1Q58HT5 328 aa17.08■□□□□ 0.32
ATG4D-201ENST00000309469 LHFPL4Q7Z7J7 247 aa17.08■□□□□ 0.32
ATG4D-201ENST00000309469 RAB24Q969Q5 203 aa17.08■□□□□ 0.32
ATG4D-201ENST00000309469 HILPDAQ9Y5L2 63 aa17.08■□□□□ 0.32
ATG4D-201ENST00000309469 PXMP4Q9Y6I8 212 aa17.08■□□□□ 0.32
ATG4D-201ENST00000309469 IGHV2-70DA0A0C4DH43 119 aa17.07■□□□□ 0.32
ATG4D-201ENST00000309469 ZFP92A6NM28 416 aa17.07■□□□□ 0.32
ATG4D-201ENST00000309469 M0R036 132 aa17.07■□□□□ 0.32
ATG4D-201ENST00000309469 HMGB3O15347 200 aaKnown RBP17.07■□□□□ 0.32
ATG4D-201ENST00000309469 RAB31Q13636 194 aa17.07■□□□□ 0.32
ATG4D-201ENST00000309469 PMS2P11Q13670 270 aa17.07■□□□□ 0.32
ATG4D-201ENST00000309469 MIC13Q5XKP0 118 aa17.07■□□□□ 0.32
ATG4D-201ENST00000309469 SIRPDQ9H106 197 aa17.07■□□□□ 0.32
ATG4D-201ENST00000309469 KCNIP2Q9NS61 270 aa17.07■□□□□ 0.32
ATG4D-201ENST00000309469 METTL1Q9UBP6 276 aaKnown RBP17.07■□□□□ 0.32
ATG4D-201ENST00000309469 YIF1AO95070 293 aa17.06■□□□□ 0.32
ATG4D-201ENST00000309469 VENTXO95231 258 aa17.06■□□□□ 0.32
ATG4D-201ENST00000309469 BCL2P10415 239 aa17.06■□□□□ 0.32
ATG4D-201ENST00000309469 MAS1LP35410 378 aa17.06■□□□□ 0.32
ATG4D-201ENST00000309469 GCSAMLQ5JQS6 135 aa17.06■□□□□ 0.32
ATG4D-201ENST00000309469 RPS10P5Q9NQ39 176 aa17.06■□□□□ 0.32
ATG4D-201ENST00000309469 A0A1W2PRD5 423 aa17.06■□□□□ 0.32
ATG4D-201ENST00000309469 A0A1W2PRF3 423 aa17.06■□□□□ 0.32
ATG4D-201ENST00000309469 A0A1W2PRM7 423 aa17.06■□□□□ 0.32
ATG4D-201ENST00000309469 SEC14L6B5MCN3 397 aa17.06■□□□□ 0.32
ATG4D-201ENST00000309469 ACTL6BO94805 426 aa17.06■□□□□ 0.32
ATG4D-201ENST00000309469 SUB1P53999 127 aaKnown RBP eCLIP17.06■□□□□ 0.32
ATG4D-201ENST00000309469 CD69Q07108 199 aa17.06■□□□□ 0.32
ATG4D-201ENST00000309469 TNXAQ16473 311 aa17.06■□□□□ 0.32
ATG4D-201ENST00000309469 TMEM144Q7Z5S9 345 aa17.06■□□□□ 0.32
ATG4D-201ENST00000309469 PPP1R27Q86WC6 154 aa17.06■□□□□ 0.32
ATG4D-201ENST00000309469 CFHR4Q92496 578 aa17.06■□□□□ 0.32
ATG4D-201ENST00000309469 IFNA1P01562 189 aa17.05■□□□□ 0.32
ATG4D-201ENST00000309469 SNRNP70P08621 437 aaKnown RBP17.05■□□□□ 0.32
ATG4D-201ENST00000309469 FBP1P09467 338 aa17.05■□□□□ 0.32
ATG4D-201ENST00000309469 HOXB4P17483 251 aaPredicted RBP17.05■□□□□ 0.32
ATG4D-201ENST00000309469 CDC34P49427 236 aaPredicted RBP17.05■□□□□ 0.32
ATG4D-201ENST00000309469 CEBPGP53567 150 aa17.05■□□□□ 0.32
ATG4D-201ENST00000309469 CYB561D1Q8N8Q1 229 aa17.05■□□□□ 0.32
ATG4D-201ENST00000309469 SSMEM1Q8WWF3 244 aa17.05■□□□□ 0.32
ATG4D-201ENST00000309469 C20orf24Q9BUV8 137 aa17.05■□□□□ 0.32
ATG4D-201ENST00000309469 DEFA4P12838 97 aa17.04■□□□□ 0.32
ATG4D-201ENST00000309469 GPX4P36969 197 aaPredicted RBP17.04■□□□□ 0.32
ATG4D-201ENST00000309469 RPL27AP46776 148 aaKnown RBP17.04■□□□□ 0.32
ATG4D-201ENST00000309469 GAMTQ14353 236 aa17.04■□□□□ 0.32
ATG4D-201ENST00000309469 HABP2Q14520 560 aaPredicted RBP17.04■□□□□ 0.32
ATG4D-201ENST00000309469 MLANAQ16655 118 aa17.04■□□□□ 0.32
ATG4D-201ENST00000309469 CACNG8Q8WXS5 425 aa17.04■□□□□ 0.32
ATG4D-201ENST00000309469 P2RX4Q99571 388 aa17.04■□□□□ 0.32
ATG4D-201ENST00000309469 FBXL15Q9H469 300 aa17.04■□□□□ 0.32
ATG4D-201ENST00000309469 SMCO4Q9NRQ5 59 aa17.04■□□□□ 0.32
ATG4D-201ENST00000309469 C7orf77A4D0Y5 90 aa17.04■□□□□ 0.32
ATG4D-201ENST00000309469 RPL29P47914 159 aaKnown RBP17.04■□□□□ 0.32
ATG4D-201ENST00000309469 COMPP49747 757 aaPredicted RBP17.04■□□□□ 0.32
ATG4D-201ENST00000309469 RBMS3Q6XE24 437 aaKnown RBP17.04■□□□□ 0.32
ATG4D-201ENST00000309469 MRPL41Q8IXM3 137 aaKnown RBP17.04■□□□□ 0.32
ATG4D-201ENST00000309469 RNASEH2CQ8TDP1 164 aaKnown RBP17.04■□□□□ 0.32
ATG4D-201ENST00000309469 TMPRSS5Q9H3S3 457 aa17.04■□□□□ 0.32
ATG4D-201ENST00000309469 VAX2Q9UIW0 290 aa17.04■□□□□ 0.32
ATG4D-201ENST00000309469 PUS1Q9Y606 427 aaKnown RBP eCLIP17.04■□□□□ 0.32
ATG4D-201ENST00000309469 TNCP24821 2201 aa17.03■□□□□ 0.32
ATG4D-201ENST00000309469 IGLC7A0M8Q6 106 aa17.03■□□□□ 0.32
ATG4D-201ENST00000309469 AKR1C3P42330 323 aa17.03■□□□□ 0.32
ATG4D-201ENST00000309469 B2MP61769 119 aa17.03■□□□□ 0.32
ATG4D-201ENST00000309469 RHEBQ15382 184 aa17.03■□□□□ 0.32
ATG4D-201ENST00000309469 ARHGAP32A7KAX9 2087 aa17.02■□□□□ 0.32
ATG4D-201ENST00000309469 A0A1W2PPV4 95 aa17.02■□□□□ 0.32
ATG4D-201ENST00000309469 FOXH1O75593 365 aa17.02■□□□□ 0.32
ATG4D-201ENST00000309469 TOX4O94842 621 aa17.02■□□□□ 0.32
ATG4D-201ENST00000309469 MINOS1Q5TGZ0 78 aa17.02■□□□□ 0.32
ATG4D-201ENST00000309469 STPG3Q8N7X2 389 aa17.02■□□□□ 0.32
ATG4D-201ENST00000309469 MINOS1-NBL1R4GNA1 71 aa17.02■□□□□ 0.32
ATG4D-201ENST00000309469 PAX6P26367 422 aa17.02■□□□□ 0.31
ATG4D-201ENST00000309469 GNB1P62873 340 aa17.02■□□□□ 0.31
ATG4D-201ENST00000309469 PRR20EP86478 221 aa17.02■□□□□ 0.31
ATG4D-201ENST00000309469 PRR20CP86479 221 aa17.02■□□□□ 0.31
ATG4D-201ENST00000309469 PRR20DP86480 221 aa17.02■□□□□ 0.31
ATG4D-201ENST00000309469 PRR20BP86481 221 aa17.02■□□□□ 0.31
ATG4D-201ENST00000309469 PRR20AP86496 221 aa17.02■□□□□ 0.31
ATG4D-201ENST00000309469 SSX2Q16385 188 aa17.02■□□□□ 0.31
ATG4D-201ENST00000309469 SLC16A13Q7RTY0 426 aa17.02■□□□□ 0.31
ATG4D-201ENST00000309469 SLC45A2Q9UMX9 530 aa17.02■□□□□ 0.31
ATG4D-201ENST00000309469 PRELID1Q9Y255 219 aa17.02■□□□□ 0.31
ATG4D-201ENST00000309469 DOPEY1Q5JWR5 2465 aa17.01■□□□□ 0.31
ATG4D-201ENST00000309469 OOSP1A8MZH6 123 aa17.01■□□□□ 0.31
ATG4D-201ENST00000309469 MOSP00540 346 aa17.01■□□□□ 0.31
ATG4D-201ENST00000309469 REG1AP05451 166 aa17.01■□□□□ 0.31
ATG4D-201ENST00000309469 LGALS4P56470 323 aa17.01■□□□□ 0.31
ATG4D-201ENST00000309469 CCDC144NLQ6NUI1 221 aa17.01■□□□□ 0.31
ATG4D-201ENST00000309469 SLC35E3Q7Z769 313 aa17.01■□□□□ 0.31
ATG4D-201ENST00000309469 FAM168AQ92567 244 aa17.01■□□□□ 0.31
ATG4D-201ENST00000309469 PIMREGQ9BSJ6 248 aa17.01■□□□□ 0.31
ATG4D-201ENST00000309469 IGKV1OR2-108A0A075B7D4 117 aa17■□□□□ 0.31
ATG4D-201ENST00000309469 H3BQ15 152 aa17■□□□□ 0.31
ATG4D-201ENST00000309469 FCN1O00602 326 aa17■□□□□ 0.31
ATG4D-201ENST00000309469 PLGLAQ15195 96 aa17■□□□□ 0.31
ATG4D-201ENST00000309469 MMDQ15546 238 aa17■□□□□ 0.31
ATG4D-201ENST00000309469 SLC35E1Q96K37 410 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms