RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 BLOC1S1P78537 153 aa9.37□□□□□ -0.91
SSRP1-201ENST00000278412 HES1Q14469 280 aa9.37□□□□□ -0.91
SSRP1-201ENST00000278412 Q96MF0 132 aa9.37□□□□□ -0.91
SSRP1-201ENST00000278412 RAB40CQ96S21 281 aa9.37□□□□□ -0.91
SSRP1-201ENST00000278412 HEYLQ9NQ87 328 aaPredicted RBP9.37□□□□□ -0.91
SSRP1-201ENST00000278412 WSB1Q9Y6I7 421 aa9.37□□□□□ -0.91
SSRP1-201ENST00000278412 MDFIC2A0A1B0GVS7 189 aa9.37□□□□□ -0.91
SSRP1-201ENST00000278412 PAX8Q06710 450 aa9.37□□□□□ -0.91
SSRP1-201ENST00000278412 THNSL2Q86YJ6 484 aa9.37□□□□□ -0.91
SSRP1-201ENST00000278412 PDPNQ86YL7 162 aa9.37□□□□□ -0.91
SSRP1-201ENST00000278412 C15orf54Q8N8G6 183 aa9.37□□□□□ -0.91
SSRP1-201ENST00000278412 SEC11CQ9BY50 192 aa9.37□□□□□ -0.91
SSRP1-201ENST00000278412 LY86O95711 162 aa9.37□□□□□ -0.91
SSRP1-201ENST00000278412 MSMBP08118 114 aa9.37□□□□□ -0.91
SSRP1-201ENST00000278412 RPL23AP62750 156 aaKnown RBP9.37□□□□□ -0.91
SSRP1-201ENST00000278412 PSG5Q15238 335 aa9.37□□□□□ -0.91
SSRP1-201ENST00000278412 GPR157Q5UAW9 335 aa9.37□□□□□ -0.91
SSRP1-201ENST00000278412 TMEM14EPQ6UXP3 125 aa9.37□□□□□ -0.91
SSRP1-201ENST00000278412 OR1S2Q8NGQ3 325 aa9.37□□□□□ -0.91
SSRP1-201ENST00000278412 OSR1Q8TAX0 266 aaPredicted RBP9.37□□□□□ -0.91
SSRP1-201ENST00000278412 SMIM8Q96KF7 97 aa9.37□□□□□ -0.91
SSRP1-201ENST00000278412 GGACTQ9BVM4 153 aa9.37□□□□□ -0.91
SSRP1-201ENST00000278412 C7orf69Q9H7B7 122 aa9.37□□□□□ -0.91
SSRP1-201ENST00000278412 UBE2L5PA0A1B0GUS4 154 aa9.36□□□□□ -0.91
SSRP1-201ENST00000278412 IFNA10P01566 189 aa9.36□□□□□ -0.91
SSRP1-201ENST00000278412 OR8U8P0C7N1 319 aa9.36□□□□□ -0.91
SSRP1-201ENST00000278412 AREGP15514 252 aa9.36□□□□□ -0.91
SSRP1-201ENST00000278412 IL3RAP26951 378 aa9.36□□□□□ -0.91
SSRP1-201ENST00000278412 SULT1A1P50225 295 aa9.36□□□□□ -0.91
SSRP1-201ENST00000278412 WT1-ASQ06250 92 aa9.36□□□□□ -0.91
SSRP1-201ENST00000278412 POU2AF1Q16633 256 aa9.36□□□□□ -0.91
SSRP1-201ENST00000278412 KLF17Q5JT82 389 aaPredicted RBP9.36□□□□□ -0.91
SSRP1-201ENST00000278412 REC114Q7Z4M0 266 aa9.36□□□□□ -0.91
SSRP1-201ENST00000278412 FAM216AQ8WUB2 273 aa9.36□□□□□ -0.91
SSRP1-201ENST00000278412 NDUFS8O00217 210 aa9.36□□□□□ -0.91
SSRP1-201ENST00000278412 FAM157CP0CG43 387 aa9.36□□□□□ -0.91
SSRP1-201ENST00000278412 MMDQ15546 238 aa9.36□□□□□ -0.91
SSRP1-201ENST00000278412 AARDQ4LEZ3 155 aa9.36□□□□□ -0.91
SSRP1-201ENST00000278412 TMEM219Q86XT9 240 aa9.36□□□□□ -0.91
SSRP1-201ENST00000278412 STOML3Q8TAV4 291 aa9.36□□□□□ -0.91
SSRP1-201ENST00000278412 EAF1Q96JC9 268 aaPredicted RBP9.36□□□□□ -0.91
SSRP1-201ENST00000278412 VSIRQ9H7M9 311 aa9.36□□□□□ -0.91
SSRP1-201ENST00000278412 UNKLQ9H9P5 680 aaKnown RBP9.36□□□□□ -0.91
SSRP1-201ENST00000278412 FOXA2Q9Y261 457 aaPredicted RBP9.36□□□□□ -0.91
SSRP1-201ENST00000278412 IGHV3-21A0A0B4J1V1 117 aa9.35□□□□□ -0.91
SSRP1-201ENST00000278412 A0A0U1RQK1 487 aa9.35□□□□□ -0.91
SSRP1-201ENST00000278412 NUDT19A8MXV4 375 aa9.35□□□□□ -0.91
SSRP1-201ENST00000278412 CA2P00918 260 aa9.35□□□□□ -0.91
SSRP1-201ENST00000278412 RD3LP0DJH9 198 aa9.35□□□□□ -0.91
SSRP1-201ENST00000278412 TPT1P13693 172 aaKnown RBP9.35□□□□□ -0.91
SSRP1-201ENST00000278412 ATP6V0CP27449 155 aa9.35□□□□□ -0.91
SSRP1-201ENST00000278412 RAB2AP61019 212 aa9.35□□□□□ -0.91
SSRP1-201ENST00000278412 HSPE1P61604 102 aaKnown RBP9.35□□□□□ -0.91
SSRP1-201ENST00000278412 RPL8P62917 257 aaKnown RBP9.35□□□□□ -0.91
SSRP1-201ENST00000278412 KIR3DL3Q8N743 410 aa9.35□□□□□ -0.91
SSRP1-201ENST00000278412 BET1LQ9NYM9 111 aa9.35□□□□□ -0.91
SSRP1-201ENST00000278412 PAX1P15863 534 aa9.35□□□□□ -0.91
SSRP1-201ENST00000278412 PPT1P50897 306 aa9.35□□□□□ -0.91
SSRP1-201ENST00000278412 SLC38A11Q08AI6 406 aa9.35□□□□□ -0.91
SSRP1-201ENST00000278412 TNXAQ16473 311 aa9.35□□□□□ -0.91
SSRP1-201ENST00000278412 C1orf122Q6ZSJ8 110 aa9.35□□□□□ -0.91
SSRP1-201ENST00000278412 ZNF429Q86V71 674 aa9.35□□□□□ -0.91
SSRP1-201ENST00000278412 BCL6BQ8N143 479 aaPredicted RBP9.35□□□□□ -0.91
SSRP1-201ENST00000278412 SIGLEC9Q9Y336 463 aa9.35□□□□□ -0.91
SSRP1-201ENST00000278412 FAM90A26D6RGX4 464 aa9.34□□□□□ -0.91
SSRP1-201ENST00000278412 SMAD7O15105 426 aaKnown RBP9.34□□□□□ -0.91
SSRP1-201ENST00000278412 NPFFO15130 113 aa9.34□□□□□ -0.91
SSRP1-201ENST00000278412 TGFAP01135 160 aa9.34□□□□□ -0.91
SSRP1-201ENST00000278412 LBHQ53QV2 105 aaPredicted RBP9.34□□□□□ -0.91
SSRP1-201ENST00000278412 FAM71F2Q6NXP2 309 aa9.34□□□□□ -0.91
SSRP1-201ENST00000278412 TMEM182Q6ZP80 229 aaPredicted RBP9.34□□□□□ -0.91
SSRP1-201ENST00000278412 SSX3Q99909 188 aa9.34□□□□□ -0.91
SSRP1-201ENST00000278412 SMCO4Q9NRQ5 59 aa9.34□□□□□ -0.91
SSRP1-201ENST00000278412 CBY1Q9Y3M2 126 aa9.34□□□□□ -0.91
SSRP1-201ENST00000278412 HIVEP1P15822 2718 aa9.34□□□□□ -0.91
SSRP1-201ENST00000278412 FGF16O43320 207 aa9.34□□□□□ -0.91
SSRP1-201ENST00000278412 CRYGBP07316 175 aa9.34□□□□□ -0.91
SSRP1-201ENST00000278412 UBE2E1P51965 193 aa9.34□□□□□ -0.91
SSRP1-201ENST00000278412 NDPQ00604 133 aa9.34□□□□□ -0.91
SSRP1-201ENST00000278412 AKR1C1Q04828 323 aa9.34□□□□□ -0.91
SSRP1-201ENST00000278412 TMEM167AQ8TBQ9 72 aa9.34□□□□□ -0.91
SSRP1-201ENST00000278412 HIST1H2BAQ96A08 127 aa9.34□□□□□ -0.91
SSRP1-201ENST00000278412 C1orf159Q96HA4 380 aa9.34□□□□□ -0.91
SSRP1-201ENST00000278412 C2orf88Q9BSF0 95 aa9.34□□□□□ -0.91
SSRP1-201ENST00000278412 SLC25A31Q9H0C2 315 aa9.34□□□□□ -0.91
SSRP1-201ENST00000278412 STRAPQ9Y3F4 350 aaKnown RBP9.34□□□□□ -0.91
SSRP1-201ENST00000278412 FBXO7Q9Y3I1 522 aa9.34□□□□□ -0.91
SSRP1-201ENST00000278412 AMMECR1Q9Y4X0 333 aaPredicted RBP9.34□□□□□ -0.91
SSRP1-201ENST00000278412 LINC01548A6NM66 108 aa9.33□□□□□ -0.92
SSRP1-201ENST00000278412 NCBP2LA6PVI3 153 aaKnown RBP9.33□□□□□ -0.92
SSRP1-201ENST00000278412 PRH1P02810 166 aa9.33□□□□□ -0.92
SSRP1-201ENST00000278412 MC5RP33032 325 aa9.33□□□□□ -0.92
SSRP1-201ENST00000278412 IL17RELQ6ZVW7 336 aa9.33□□□□□ -0.92
SSRP1-201ENST00000278412 UBAC2Q8NBM4 344 aa9.33□□□□□ -0.92
SSRP1-201ENST00000278412 COMMD5Q9GZQ3 224 aa9.33□□□□□ -0.92
SSRP1-201ENST00000278412 NDUFA4L2Q9NRX3 87 aa9.33□□□□□ -0.92
SSRP1-201ENST00000278412 ANK3Q12955 4377 aaKnown RBP9.33□□□□□ -0.92
SSRP1-201ENST00000278412 AGPAT2O15120 278 aa9.33□□□□□ -0.92
SSRP1-201ENST00000278412 MFAP2P55001 183 aa9.33□□□□□ -0.92
SSRP1-201ENST00000278412 PRCDQ00LT1 54 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms