RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 TNXAQ16473 311 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 C5orf64Q2M2E5 130 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 ARSJQ5FYB0 599 aaPredicted RBP13.05□□□□□ -0.32
TPM1-201ENST00000267996 AKR1C8PQ5T2L2 129 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 PVRIGQ6DKI7 326 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 PRSS57Q6UWY2 283 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 MRPL41Q8IXM3 137 aaKnown RBP13.05□□□□□ -0.32
TPM1-201ENST00000267996 LINC01356Q8N9X3 169 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 SRSF8Q9BRL6 282 aaKnown RBP13.05□□□□□ -0.32
TPM1-201ENST00000267996 HIF1ANQ9NWT6 349 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 KIAA1456Q9P272 454 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 NAV3Q8IVL0 2385 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 TEX22C9J3V5 150 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 MPDU1O75352 247 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 BRS3P32247 399 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 HES1Q14469 280 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 TREML4Q6UXN2 200 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 IL34Q6ZMJ4 242 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 KRTAP1-3Q8IUG1 177 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 ZNF114Q8NC26 417 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 FAM213BQ8TBF2 198 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 NPCDR1Q9BY65 106 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 HRH4Q9H3N8 390 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 C7orf69Q9H7B7 122 aa13.05□□□□□ -0.32
TPM1-201ENST00000267996 LSM4Q9Y4Z0 139 aaKnown RBP13.05□□□□□ -0.32
TPM1-201ENST00000267996 FAM106CPP0CH98 169 aa13.04□□□□□ -0.32
TPM1-201ENST00000267996 OR13C7P0DN81 318 aa13.04□□□□□ -0.32
TPM1-201ENST00000267996 Q5PR19 223 aa13.04□□□□□ -0.32
TPM1-201ENST00000267996 HIST2H2BCQ6DN03 193 aa13.04□□□□□ -0.32
TPM1-201ENST00000267996 P2RX4Q99571 388 aa13.04□□□□□ -0.32
TPM1-201ENST00000267996 NPVFQ9HCQ7 196 aa13.04□□□□□ -0.32
TPM1-201ENST00000267996 CSMD2Q7Z408 3487 aa13.03□□□□□ -0.32
TPM1-201ENST00000267996 TRAV40A0A0B4J280 105 aa13.03□□□□□ -0.32
TPM1-201ENST00000267996 SUB1P53999 127 aaKnown RBP eCLIP13.03□□□□□ -0.32
TPM1-201ENST00000267996 PLGLAQ15195 96 aa13.03□□□□□ -0.32
TPM1-201ENST00000267996 RNASEH2CQ8TDP1 164 aaKnown RBP13.03□□□□□ -0.32
TPM1-201ENST00000267996 SRSF12Q8WXF0 261 aaKnown RBP13.03□□□□□ -0.32
TPM1-201ENST00000267996 RPRMQ9NS64 109 aa13.03□□□□□ -0.32
TPM1-201ENST00000267996 TMEM11P17152 192 aa13.02□□□□□ -0.32
TPM1-201ENST00000267996 GPX4P36969 197 aaPredicted RBP13.02□□□□□ -0.32
TPM1-201ENST00000267996 GNB1P62873 340 aa13.02□□□□□ -0.32
TPM1-201ENST00000267996 CD69Q07108 199 aa13.02□□□□□ -0.32
TPM1-201ENST00000267996 ZNF616Q08AN1 781 aa13.02□□□□□ -0.32
TPM1-201ENST00000267996 FAM120AOSQ5T036 256 aa13.02□□□□□ -0.32
TPM1-201ENST00000267996 RUSC1-AS1Q66K80 236 aa13.02□□□□□ -0.32
TPM1-201ENST00000267996 UQCC3Q6UW78 93 aa13.02□□□□□ -0.32
TPM1-201ENST00000267996 CACNG8Q8WXS5 425 aa13.02□□□□□ -0.32
TPM1-201ENST00000267996 MEGF9Q9H1U4 602 aa13.02□□□□□ -0.32
TPM1-201ENST00000267996 SMCO3A2RU48 225 aa13.02□□□□□ -0.33
TPM1-201ENST00000267996 RNF223E7ERA6 249 aa13.02□□□□□ -0.33
TPM1-201ENST00000267996 I3L521 148 aa13.02□□□□□ -0.33
TPM1-201ENST00000267996 SOX15O60248 233 aa13.02□□□□□ -0.33
TPM1-201ENST00000267996 IGHV4-38-2P0DP08 117 aa13.02□□□□□ -0.33
TPM1-201ENST00000267996 AREGP15514 252 aa13.02□□□□□ -0.33
TPM1-201ENST00000267996 TMEM41BQ5BJD5 291 aa13.02□□□□□ -0.33
TPM1-201ENST00000267996 ACSM6Q6P461 480 aa13.02□□□□□ -0.33
TPM1-201ENST00000267996 COMMD1Q8N668 190 aa13.02□□□□□ -0.33
TPM1-201ENST00000267996 ZNF709Q8N972 641 aa13.02□□□□□ -0.33
TPM1-201ENST00000267996 VSIRQ9H7M9 311 aa13.02□□□□□ -0.33
TPM1-201ENST00000267996 IGHV3OR16-10A0A075B7F0 116 aa13.01□□□□□ -0.33
TPM1-201ENST00000267996 C17orf112F2Z3M2 114 aa13.01□□□□□ -0.33
TPM1-201ENST00000267996 J3QLI3 93 aa13.01□□□□□ -0.33
TPM1-201ENST00000267996 AVPP01185 164 aa13.01□□□□□ -0.33
TPM1-201ENST00000267996 KLF17Q5JT82 389 aaPredicted RBP13.01□□□□□ -0.33
TPM1-201ENST00000267996 TOR2AQ5JU69 321 aa13.01□□□□□ -0.33
TPM1-201ENST00000267996 SPSB3Q6PJ21 355 aa13.01□□□□□ -0.33
TPM1-201ENST00000267996 ZNF562Q6V9R5 426 aa13.01□□□□□ -0.33
TPM1-201ENST00000267996 TMEM144Q7Z5S9 345 aa13.01□□□□□ -0.33
TPM1-201ENST00000267996 MGST2Q99735 147 aa13.01□□□□□ -0.33
TPM1-201ENST00000267996 C1RLQ9NZP8 487 aa13.01□□□□□ -0.33
TPM1-201ENST00000267996 MAP1AP78559 2803 aaPredicted RBP13.01□□□□□ -0.33
TPM1-201ENST00000267996 TRAV1-1A0A0B4J248 108 aa13□□□□□ -0.33
TPM1-201ENST00000267996 TSPAN15O95858 294 aa13□□□□□ -0.33
TPM1-201ENST00000267996 MBP02144 154 aa13□□□□□ -0.33
TPM1-201ENST00000267996 H2AFB1P0C5Y9 115 aa13□□□□□ -0.33
TPM1-201ENST00000267996 GAMTQ14353 236 aa13□□□□□ -0.33
TPM1-201ENST00000267996 TEPPQ6URK8 271 aa13□□□□□ -0.33
TPM1-201ENST00000267996 Q8N9W7 124 aa13□□□□□ -0.33
TPM1-201ENST00000267996 OR1P1Q8NH06 330 aa13□□□□□ -0.33
TPM1-201ENST00000267996 MBD3L1Q8WWY6 194 aa13□□□□□ -0.33
TPM1-201ENST00000267996 GGTLC1Q9BX51 225 aa13□□□□□ -0.33
TPM1-201ENST00000267996 CR1P17927 2039 aa13□□□□□ -0.33
TPM1-201ENST00000267996 A0A0U1RQK1 487 aa12.99□□□□□ -0.33
TPM1-201ENST00000267996 CNIH1O95406 144 aa12.99□□□□□ -0.33
TPM1-201ENST00000267996 REG1AP05451 166 aa12.99□□□□□ -0.33
TPM1-201ENST00000267996 IGHV4-31P0DP07 118 aa12.99□□□□□ -0.33
TPM1-201ENST00000267996 OPRK1P41145 380 aa12.99□□□□□ -0.33
TPM1-201ENST00000267996 MFAP2P55001 183 aa12.99□□□□□ -0.33
TPM1-201ENST00000267996 FXYD3Q14802 87 aa12.99□□□□□ -0.33
TPM1-201ENST00000267996 ZNF726P1Q15940 193 aa12.99□□□□□ -0.33
TPM1-201ENST00000267996 BRD3OSQ6XYD6 125 aa12.99□□□□□ -0.33
TPM1-201ENST00000267996 SCRT1Q9BWW7 348 aa12.99□□□□□ -0.33
TPM1-201ENST00000267996 F11RQ9Y624 299 aaKnown RBP12.99□□□□□ -0.33
TPM1-201ENST00000267996 BTBD17A6NE02 478 aa12.99□□□□□ -0.33
TPM1-201ENST00000267996 NCBP2LA6PVI3 153 aaKnown RBP12.99□□□□□ -0.33
TPM1-201ENST00000267996 ELLP55199 621 aaPredicted RBP12.99□□□□□ -0.33
TPM1-201ENST00000267996 CX3CL1P78423 397 aa12.99□□□□□ -0.33
TPM1-201ENST00000267996 MLANAQ16655 118 aa12.99□□□□□ -0.33
TPM1-201ENST00000267996 FFAR4Q5NUL3 377 aa12.99□□□□□ -0.33
TPM1-201ENST00000267996 SLC16A13Q7RTY0 426 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms