RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 ERVK-16P61578 105 aa7.29□□□□□ -1.24
VPS41-201ENST00000265745 PLET1Q6UQ28 207 aa7.29□□□□□ -1.24
VPS41-201ENST00000265745 SLC16A13Q7RTY0 426 aa7.29□□□□□ -1.24
VPS41-201ENST00000265745 OR1L8Q8NGR8 309 aa7.29□□□□□ -1.24
VPS41-201ENST00000265745 GPX8Q8TED1 209 aa7.29□□□□□ -1.24
VPS41-201ENST00000265745 MARC2Q969Z3 335 aa7.29□□□□□ -1.24
VPS41-201ENST00000265745 CMTM3Q96MX0 182 aa7.29□□□□□ -1.24
VPS41-201ENST00000265745 FUNDC2Q9BWH2 189 aa7.29□□□□□ -1.24
VPS41-201ENST00000265745 ZNF436Q9C0F3 470 aaPredicted RBP7.29□□□□□ -1.24
VPS41-201ENST00000265745 SRD5A3Q9H8P0 318 aa7.29□□□□□ -1.24
VPS41-201ENST00000265745 RETNQ9HD89 108 aa7.29□□□□□ -1.24
VPS41-201ENST00000265745 GAR1Q9NY12 217 aaKnown RBP7.29□□□□□ -1.24
VPS41-201ENST00000265745 COMMD3Q9UBI1 195 aa7.29□□□□□ -1.24
VPS41-201ENST00000265745 NSG2Q9Y328 171 aa7.29□□□□□ -1.24
VPS41-201ENST00000265745 DNAH7Q8WXX0 4024 aa7.29□□□□□ -1.24
VPS41-201ENST00000265745 DYNC2H1Q8NCM8 4307 aaKnown RBP7.28□□□□□ -1.24
VPS41-201ENST00000265745 TRAV25A0A0B4J276 109 aa7.28□□□□□ -1.24
VPS41-201ENST00000265745 IGHV3-35A0A0C4DH35 117 aa7.28□□□□□ -1.24
VPS41-201ENST00000265745 SMIM31A0A1B0GVY4 71 aa7.28□□□□□ -1.24
VPS41-201ENST00000265745 CYB5BO43169 146 aa7.28□□□□□ -1.24
VPS41-201ENST00000265745 SNAPC5O75971 98 aa7.28□□□□□ -1.24
VPS41-201ENST00000265745 APOA1P02647 267 aa7.28□□□□□ -1.24
VPS41-201ENST00000265745 G6PCP35575 357 aa7.28□□□□□ -1.24
VPS41-201ENST00000265745 MFAP2P55001 183 aa7.28□□□□□ -1.24
VPS41-201ENST00000265745 ELLP55199 621 aaPredicted RBP7.28□□□□□ -1.24
VPS41-201ENST00000265745 NCS1P62166 190 aa7.28□□□□□ -1.24
VPS41-201ENST00000265745 C4orf46Q504U0 113 aa7.28□□□□□ -1.24
VPS41-201ENST00000265745 SLC25A24Q6NUK1 477 aa7.28□□□□□ -1.24
VPS41-201ENST00000265745 LPCAT3Q6P1A2 487 aa7.28□□□□□ -1.24
VPS41-201ENST00000265745 BTNL8Q6UX41 500 aa7.28□□□□□ -1.24
VPS41-201ENST00000265745 LSM10Q969L4 123 aaKnown RBP7.28□□□□□ -1.24
VPS41-201ENST00000265745 FXYD6Q9H0Q3 95 aa7.28□□□□□ -1.24
VPS41-201ENST00000265745 SCPEP1Q9HB40 452 aa7.28□□□□□ -1.24
VPS41-201ENST00000265745 MRPL27Q9P0M9 148 aaKnown RBP7.28□□□□□ -1.24
VPS41-201ENST00000265745 UFC1Q9Y3C8 167 aa7.28□□□□□ -1.24
VPS41-201ENST00000265745 OR51B2Q9Y5P1 312 aa7.28□□□□□ -1.24
VPS41-201ENST00000265745 OR2T8A6NH00 312 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 DBX1A6NMT0 343 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 TGOLN2O43493 480 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 SCAF4O95104 1147 aaKnown RBP7.27□□□□□ -1.25
VPS41-201ENST00000265745 ELK1P19419 428 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 UCP3P55916 312 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 VBP1P61758 197 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 TSPAN5P62079 268 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 ANKRD55Q3KP44 614 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 PHLDA2Q53GA4 152 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 SNX29P2Q8IUI4 249 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 OR52B4Q8NGK2 314 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 OR5B3Q8NH48 314 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 SCARB1Q8WTV0 552 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 TMEM190Q8WZ59 177 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 BSCL2Q96G97 398 aaPredicted RBP7.27□□□□□ -1.25
VPS41-201ENST00000265745 ATP6V0BQ99437 205 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 FAM110AQ9BQ89 295 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 HINT2Q9BX68 163 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 C5orf66Q9H5L9 145 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 FAM212BQ9NTI7 297 aaPredicted RBP7.27□□□□□ -1.25
VPS41-201ENST00000265745 TMEM14BQ9NUH8 114 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 C21orf62Q9NYP8 219 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 PRNDQ9UKY0 176 aa7.27□□□□□ -1.25
VPS41-201ENST00000265745 F11RQ9Y624 299 aaKnown RBP7.27□□□□□ -1.25
VPS41-201ENST00000265745 SACSQ9NZJ4 4579 aa7.26□□□□□ -1.25
VPS41-201ENST00000265745 RYR2Q92736 4967 aa7.26□□□□□ -1.25
VPS41-201ENST00000265745 IGHV3-21A0A0B4J1V1 117 aa7.26□□□□□ -1.25
VPS41-201ENST00000265745 K7EIM0 57 aa7.26□□□□□ -1.25
VPS41-201ENST00000265745 HPGDSO60760 199 aa7.26□□□□□ -1.25
VPS41-201ENST00000265745 S100GP29377 79 aa7.26□□□□□ -1.25
VPS41-201ENST00000265745 RORCP51449 518 aa7.26□□□□□ -1.25
VPS41-201ENST00000265745 SPSB3Q6PJ21 355 aa7.26□□□□□ -1.25
VPS41-201ENST00000265745 RBPMS2Q6ZRY4 209 aaKnown RBP7.26□□□□□ -1.25
VPS41-201ENST00000265745 TBC1D26Q86UD7 250 aa7.26□□□□□ -1.25
VPS41-201ENST00000265745 OR1L6Q8NGR2 347 aa7.26□□□□□ -1.25
VPS41-201ENST00000265745 SEC22AQ96IW7 307 aa7.26□□□□□ -1.25
VPS41-201ENST00000265745 TMEM56Q96MV1 263 aa7.26□□□□□ -1.25
VPS41-201ENST00000265745 TSC22D3Q99576 134 aa7.26□□□□□ -1.25
VPS41-201ENST00000265745 CHRDL1Q9BU40 450 aa7.26□□□□□ -1.25
VPS41-201ENST00000265745 DAZ1Q9NQZ3 744 aaKnown RBP7.26□□□□□ -1.25
VPS41-201ENST00000265745 FKBP11Q9NYL4 201 aa7.26□□□□□ -1.25
VPS41-201ENST00000265745 C15orf61A6NNL5 157 aa7.25□□□□□ -1.25
VPS41-201ENST00000265745 NDUFA4O00483 81 aa7.25□□□□□ -1.25
VPS41-201ENST00000265745 TSPAN4O14817 238 aa7.25□□□□□ -1.25
VPS41-201ENST00000265745 IGKV1-39P01597 117 aa7.25□□□□□ -1.25
VPS41-201ENST00000265745 IGKV1D-39P04432 117 aa7.25□□□□□ -1.25
VPS41-201ENST00000265745 CTSGP08311 255 aa7.25□□□□□ -1.25
VPS41-201ENST00000265745 RCVRNP35243 200 aa7.25□□□□□ -1.25
VPS41-201ENST00000265745 SLC38A6Q8IZM9 456 aa7.25□□□□□ -1.25
VPS41-201ENST00000265745 OR2C3Q8N628 320 aa7.25□□□□□ -1.25
VPS41-201ENST00000265745 OR1P1Q8NH06 330 aa7.25□□□□□ -1.25
VPS41-201ENST00000265745 IL17DQ8TAD2 202 aa7.25□□□□□ -1.25
VPS41-201ENST00000265745 SPAG8Q99932 426 aaPredicted RBP7.25□□□□□ -1.25
VPS41-201ENST00000265745 GGTLC1Q9BX51 225 aa7.25□□□□□ -1.25
VPS41-201ENST00000265745 LOC102724200A0A096LPH7 203 aaPredicted RBP7.24□□□□□ -1.25
VPS41-201ENST00000265745 K7EMT4 169 aa7.24□□□□□ -1.25
VPS41-201ENST00000265745 M0QYG6 137 aa7.24□□□□□ -1.25
VPS41-201ENST00000265745 CTF1Q16619 201 aa7.24□□□□□ -1.25
VPS41-201ENST00000265745 H2BFWTQ7Z2G1 175 aa7.24□□□□□ -1.25
VPS41-201ENST00000265745 ZNF414Q96IQ9 312 aa7.24□□□□□ -1.25
VPS41-201ENST00000265745 OVOL2Q9BRP0 275 aa7.24□□□□□ -1.25
VPS41-201ENST00000265745 C20orf24Q9BUV8 137 aa7.24□□□□□ -1.25
VPS41-201ENST00000265745 KLK11Q9UBX7 282 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms