RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 Q6ZNX1 250 aa11.11□□□□□ -0.63
SSBP1-201ENST00000265304 OR5T1Q8NG75 326 aa11.11□□□□□ -0.63
SSBP1-201ENST00000265304 OR4X2Q8NGF9 303 aa11.11□□□□□ -0.63
SSBP1-201ENST00000265304 OR1S1Q8NH92 325 aa11.11□□□□□ -0.63
SSBP1-201ENST00000265304 SPATA3Q8NHX4 192 aa11.11□□□□□ -0.63
SSBP1-201ENST00000265304 ABHD5Q8WTS1 349 aa11.11□□□□□ -0.63
SSBP1-201ENST00000265304 UBE2E2Q96LR5 201 aa11.11□□□□□ -0.63
SSBP1-201ENST00000265304 PDCD10Q9BUL8 212 aa11.11□□□□□ -0.63
SSBP1-201ENST00000265304 PLEKHA3Q9HB20 300 aa11.11□□□□□ -0.63
SSBP1-201ENST00000265304 F11RQ9Y624 299 aaKnown RBP11.11□□□□□ -0.63
SSBP1-201ENST00000265304 MED6O75586 246 aa11.1□□□□□ -0.63
SSBP1-201ENST00000265304 HIST1H1BP16401 226 aaKnown RBP11.1□□□□□ -0.63
SSBP1-201ENST00000265304 MFAP2P55001 183 aa11.1□□□□□ -0.63
SSBP1-201ENST00000265304 ERHP84090 104 aaKnown RBP11.1□□□□□ -0.63
SSBP1-201ENST00000265304 CYCSP99999 105 aaKnown RBP11.1□□□□□ -0.63
SSBP1-201ENST00000265304 SHISA2Q6UWI4 295 aa11.1□□□□□ -0.63
SSBP1-201ENST00000265304 GSG1LQ6UXU4 331 aa11.1□□□□□ -0.63
SSBP1-201ENST00000265304 ZNF491Q8N8L2 437 aa11.1□□□□□ -0.63
SSBP1-201ENST00000265304 NECAP1Q8NC96 275 aa11.1□□□□□ -0.63
SSBP1-201ENST00000265304 USMG5Q96IX5 58 aa11.1□□□□□ -0.63
SSBP1-201ENST00000265304 ATP6V0BQ99437 205 aa11.1□□□□□ -0.63
SSBP1-201ENST00000265304 P2RX4Q99571 388 aa11.1□□□□□ -0.63
SSBP1-201ENST00000265304 NMES1Q9C002 83 aa11.1□□□□□ -0.63
SSBP1-201ENST00000265304 C11orf1Q9H5F2 150 aa11.1□□□□□ -0.63
SSBP1-201ENST00000265304 TRRAPQ9Y4A5 3859 aa11.1□□□□□ -0.63
SSBP1-201ENST00000265304 FAM223BA6NKX1 122 aa11.09□□□□□ -0.63
SSBP1-201ENST00000265304 SYNGR2O43760 224 aa11.09□□□□□ -0.63
SSBP1-201ENST00000265304 RNASE2P10153 161 aaKnown RBP11.09□□□□□ -0.63
SSBP1-201ENST00000265304 CD28P10747 220 aa11.09□□□□□ -0.63
SSBP1-201ENST00000265304 NKX2-1P43699 371 aaPredicted RBP11.09□□□□□ -0.63
SSBP1-201ENST00000265304 H2BFSP57053 126 aa11.09□□□□□ -0.63
SSBP1-201ENST00000265304 TAS2R30P59541 319 aa11.09□□□□□ -0.63
SSBP1-201ENST00000265304 C2orf83Q53S99 150 aa11.09□□□□□ -0.63
SSBP1-201ENST00000265304 C12orf54Q6X4T0 127 aa11.09□□□□□ -0.63
SSBP1-201ENST00000265304 FAM223AQ8IWN6 122 aa11.09□□□□□ -0.63
SSBP1-201ENST00000265304 TMEM170AQ8WVE7 144 aa11.09□□□□□ -0.63
SSBP1-201ENST00000265304 ASB13Q8WXK3 278 aa11.09□□□□□ -0.63
SSBP1-201ENST00000265304 RBKSQ9H477 322 aa11.09□□□□□ -0.63
SSBP1-201ENST00000265304 TSSC4Q9Y5U2 329 aaPredicted RBP11.09□□□□□ -0.63
SSBP1-201ENST00000265304 U3KQ87 197 aa11.09□□□□□ -0.63
SSBP1-201ENST00000265304 CCSO14618 274 aa11.08□□□□□ -0.64
SSBP1-201ENST00000265304 SSNA1O43805 119 aa11.08□□□□□ -0.64
SSBP1-201ENST00000265304 MBPP02686 304 aaPredicted RBP11.08□□□□□ -0.64
SSBP1-201ENST00000265304 RPLP1P05386 114 aaKnown RBP11.08□□□□□ -0.64
SSBP1-201ENST00000265304 APELAP0DMC3 54 aa11.08□□□□□ -0.64
SSBP1-201ENST00000265304 HTR2BP41595 481 aa11.08□□□□□ -0.64
SSBP1-201ENST00000265304 RPL23AP62750 156 aaKnown RBP11.08□□□□□ -0.64
SSBP1-201ENST00000265304 NDUFA11Q86Y39 141 aa11.08□□□□□ -0.64
SSBP1-201ENST00000265304 UXS1Q8NBZ7 420 aa11.08□□□□□ -0.64
SSBP1-201ENST00000265304 DTD1Q8TEA8 209 aa11.08□□□□□ -0.64
SSBP1-201ENST00000265304 SMIM8Q96KF7 97 aa11.08□□□□□ -0.64
SSBP1-201ENST00000265304 CIB3Q96Q77 187 aaPredicted RBP11.08□□□□□ -0.64
SSBP1-201ENST00000265304 CITED2Q99967 270 aaPredicted RBP11.08□□□□□ -0.64
SSBP1-201ENST00000265304 HINT2Q9BX68 163 aa11.08□□□□□ -0.64
SSBP1-201ENST00000265304 A0A0G2JLM5 398 aa11.07□□□□□ -0.64
SSBP1-201ENST00000265304 CYB5BO43169 146 aa11.07□□□□□ -0.64
SSBP1-201ENST00000265304 PF4V1P10720 104 aa11.07□□□□□ -0.64
SSBP1-201ENST00000265304 CXCL3P19876 107 aa11.07□□□□□ -0.64
SSBP1-201ENST00000265304 FCGR2BP31994 310 aaPredicted RBP11.07□□□□□ -0.64
SSBP1-201ENST00000265304 PAX9P55771 341 aa11.07□□□□□ -0.64
SSBP1-201ENST00000265304 RRAS2P62070 204 aaPredicted RBP11.07□□□□□ -0.64
SSBP1-201ENST00000265304 FAM209BQ5JX69 171 aa11.07□□□□□ -0.64
SSBP1-201ENST00000265304 ZNF343Q6P1L6 599 aa11.07□□□□□ -0.64
SSBP1-201ENST00000265304 TMEM65Q6PI78 240 aa11.07□□□□□ -0.64
SSBP1-201ENST00000265304 NOXA1Q86UR1 476 aa11.07□□□□□ -0.64
SSBP1-201ENST00000265304 C3orf56Q8N813 242 aa11.07□□□□□ -0.64
SSBP1-201ENST00000265304 OR11H7Q8NGC8 314 aa11.07□□□□□ -0.64
SSBP1-201ENST00000265304 VN1R17PQ8TDU5 208 aa11.07□□□□□ -0.64
SSBP1-201ENST00000265304 RAB40CQ96S21 281 aa11.07□□□□□ -0.64
SSBP1-201ENST00000265304 HIPK2Q9H2X6 1198 aa11.07□□□□□ -0.64
SSBP1-201ENST00000265304 HEYLQ9NQ87 328 aaPredicted RBP11.07□□□□□ -0.64
SSBP1-201ENST00000265304 THYN1Q9P016 225 aa11.07□□□□□ -0.64
SSBP1-201ENST00000265304 RCL1Q9Y2P8 373 aaKnown RBP11.07□□□□□ -0.64
SSBP1-201ENST00000265304 MGAM2Q2M2H8 2515 aa11.07□□□□□ -0.64
SSBP1-201ENST00000265304 C13orf42A0A1B0GVH6 325 aa11.06□□□□□ -0.64
SSBP1-201ENST00000265304 TCRBV4S1A1TA0A5B7 111 aa11.06□□□□□ -0.64
SSBP1-201ENST00000265304 C5orf51A6NDU8 294 aa11.06□□□□□ -0.64
SSBP1-201ENST00000265304 CEBPZOSA8MTT3 80 aa11.06□□□□□ -0.64
SSBP1-201ENST00000265304 I3L521 148 aa11.06□□□□□ -0.64
SSBP1-201ENST00000265304 TMEM50AO95807 157 aa11.06□□□□□ -0.64
SSBP1-201ENST00000265304 TRGV3P03979 118 aa11.06□□□□□ -0.64
SSBP1-201ENST00000265304 REG1AP05451 166 aa11.06□□□□□ -0.64
SSBP1-201ENST00000265304 SNCAP37840 140 aa11.06□□□□□ -0.64
SSBP1-201ENST00000265304 SUB1P53999 127 aaKnown RBP eCLIP11.06□□□□□ -0.643e-6■□□□□ 11
SSBP1-201ENST00000265304 RHOGP84095 191 aa11.06□□□□□ -0.64
SSBP1-201ENST00000265304 FCN2Q15485 313 aa11.06□□□□□ -0.64
SSBP1-201ENST00000265304 SPINK9Q5DT21 86 aa11.06□□□□□ -0.64
SSBP1-201ENST00000265304 MED28Q9H204 178 aa11.06□□□□□ -0.64
SSBP1-201ENST00000265304 ENY2Q9NPA8 101 aa11.06□□□□□ -0.64
SSBP1-201ENST00000265304 MGAT4CQ9UBM8 478 aa11.06□□□□□ -0.64
SSBP1-201ENST00000265304 I3L2K1 104 aa11.05□□□□□ -0.64
SSBP1-201ENST00000265304 K7EIM0 57 aa11.05□□□□□ -0.64
SSBP1-201ENST00000265304 CORTO00230 105 aa11.05□□□□□ -0.64
SSBP1-201ENST00000265304 GOSR2O14653 212 aa11.05□□□□□ -0.64
SSBP1-201ENST00000265304 NDUFB8O95169 186 aa11.05□□□□□ -0.64
SSBP1-201ENST00000265304 DEFA4P12838 97 aa11.05□□□□□ -0.64
SSBP1-201ENST00000265304 HOXA1P49639 335 aaPredicted RBP11.05□□□□□ -0.64
SSBP1-201ENST00000265304 POLR2GP62487 172 aaKnown RBP eCLIP11.05□□□□□ -0.64
SSBP1-201ENST00000265304 C19orf35Q6ZS72 473 aa11.05□□□□□ -0.64
SSBP1-201ENST00000265304 LCNL1Q6ZST4 164 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms