RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 VENTXO95231 258 aa3.86□□□□□ -1.79
VPS13C-201ENST00000249837 IGHV1-2P23083 117 aa3.86□□□□□ -1.79
VPS13C-201ENST00000249837 GCSAMQ8N6F7 178 aa3.86□□□□□ -1.79
VPS13C-201ENST00000249837 NABP2Q9BQ15 211 aa3.86□□□□□ -1.79
VPS13C-201ENST00000249837 IFI27L2Q9H2X8 130 aa3.86□□□□□ -1.79
VPS13C-201ENST00000249837 GPX4P36969 197 aaPredicted RBP3.86□□□□□ -1.79
VPS13C-201ENST00000249837 HOXA4Q00056 320 aaPredicted RBP3.86□□□□□ -1.79
VPS13C-201ENST00000249837 FDCSPQ8NFU4 85 aa3.86□□□□□ -1.79
VPS13C-201ENST00000249837 ZCCHC14Q8WYQ9 949 aaKnown RBP3.86□□□□□ -1.79
VPS13C-201ENST00000249837 NRN1Q9NPD7 142 aa3.86□□□□□ -1.79
VPS13C-201ENST00000249837 DSCAMO60469 2012 aa3.86□□□□□ -1.79
VPS13C-201ENST00000249837 TIMP3P35625 211 aa3.86□□□□□ -1.79
VPS13C-201ENST00000249837 Q0VFX4 171 aa3.86□□□□□ -1.79
VPS13C-201ENST00000249837 IL15RAQ13261 267 aa3.86□□□□□ -1.79
VPS13C-201ENST00000249837 TCF24Q7RTU0 167 aa3.86□□□□□ -1.79
VPS13C-201ENST00000249837 NEU1Q99519 415 aa3.86□□□□□ -1.79
VPS13C-201ENST00000249837 CLEC5AQ9NY25 188 aa3.86□□□□□ -1.79
VPS13C-201ENST00000249837 TRAV5A0A0B4J249 113 aa3.86□□□□□ -1.79
VPS13C-201ENST00000249837 MOSP00540 346 aa3.86□□□□□ -1.79
VPS13C-201ENST00000249837 ORM1P02763 201 aa3.86□□□□□ -1.79
VPS13C-201ENST00000249837 GPR6P46095 362 aaPredicted RBP3.86□□□□□ -1.79
VPS13C-201ENST00000249837 ASCL3Q9NQ33 180 aa3.86□□□□□ -1.79
VPS13C-201ENST00000249837 SERF1AO75920 110 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 C1orf185Q5T7R7 199 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 DMRTA1Q5VZB9 504 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 SPATA31B1PQ5VZV4 182 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 GBGT1Q8N5D6 347 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 CENPFP49454 3210 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 ANKRD11Q6UB99 2663 aaPredicted RBP3.85□□□□□ -1.79
VPS13C-201ENST00000249837 IGKV3-7A0A075B6H7 116 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 MAS1LP35410 378 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 SELENOTP62341 195 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 RIGQ13278 110 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 JOSD1Q15040 202 aaPredicted RBP3.85□□□□□ -1.79
VPS13C-201ENST00000249837 SRSF12Q8WXF0 261 aaKnown RBP3.85□□□□□ -1.79
VPS13C-201ENST00000249837 AMY1AP04745 511 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 ADMP35318 185 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 TNRC6AQ8NDV7 1962 aaKnown RBP3.85□□□□□ -1.79
VPS13C-201ENST00000249837 CD3EP07766 207 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 MYOD1P15172 320 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 C5orf17Q8NAS9 161 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 ZNF430Q9H8G1 570 aaPredicted RBP3.85□□□□□ -1.79
VPS13C-201ENST00000249837 C16orf97H3BN30 126 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 ISLRO14498 428 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 IBA57Q5T440 356 aaKnown RBP3.85□□□□□ -1.79
VPS13C-201ENST00000249837 TMEM14EPQ6UXP3 125 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 ZCCHC24Q8N2G6 241 aaKnown RBP3.85□□□□□ -1.79
VPS13C-201ENST00000249837 TBL2Q9Y4P3 447 aaKnown RBP3.85□□□□□ -1.79
VPS13C-201ENST00000249837 FOXH1O75593 365 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 CEACAM1P13688 526 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 ASCL4Q6XD76 172 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 VSTM2AQ8TAG5 236 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 HSPB8Q9UJY1 196 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 FOXA3P55318 350 aaPredicted RBP3.85□□□□□ -1.79
VPS13C-201ENST00000249837 MUC21A0A0G2JKD1 596 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 MUC21A0A140T8X8 626 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 A6NNC1 897 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 S100A7P31151 101 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 PAX9P55771 341 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 MUC21Q5SSG8 566 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 TMEM108Q6UXF1 575 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 TXNDC17Q9BRA2 123 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 DTX1Q86Y01 620 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 TIMD4Q96H15 378 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 IER2Q9BTL4 223 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 SSBP4Q9BWG4 385 aaPredicted RBP3.85□□□□□ -1.79
VPS13C-201ENST00000249837 SFXN3Q9BWM7 321 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 TEX50A0A1B0GTY4 177 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 IL18BPO95998 194 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 GNG5P63218 68 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 RPL24P83731 157 aaKnown RBP3.85□□□□□ -1.79
VPS13C-201ENST00000249837 HAPLN4Q86UW8 402 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 MAP1LC3CQ9BXW4 147 aa3.85□□□□□ -1.79
VPS13C-201ENST00000249837 RND2P52198 227 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 RELBQ01201 579 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 EAF1Q96JC9 268 aaPredicted RBP3.84□□□□□ -1.79
VPS13C-201ENST00000249837 PROK2Q9HC23 129 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 UFC1Q9Y3C8 167 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 BMPR1BO00238 502 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 PEX7O00628 323 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 PRSS1P07477 247 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 LYPD6Q86Y78 171 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 BPIFA4PQ86YQ2 179 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 OR8B3Q8NGG8 313 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 AAMDCQ9H7C9 122 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 HIGD1AQ9Y241 93 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 CPAMD8Q8IZJ3 1885 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.84□□□□□ -1.79
VPS13C-201ENST00000249837 IFITM10A6NMD0 228 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 ZFP36L1Q07352 338 aaKnown RBP3.84□□□□□ -1.79
VPS13C-201ENST00000249837 LBHQ53QV2 105 aaPredicted RBP3.84□□□□□ -1.79
VPS13C-201ENST00000249837 WDR82Q6UXN9 313 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 RBM14Q96PK6 669 aaKnown RBP3.84□□□□□ -1.79
VPS13C-201ENST00000249837 PMCHL2Q9BQD1 86 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 YTHDF2Q9Y5A9 579 aaKnown RBP3.84□□□□□ -1.79
VPS13C-201ENST00000249837 IFNL4K9M1U5 179 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 DLL1O00548 723 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 CA1P00915 261 aaPredicted RBP3.84□□□□□ -1.79
VPS13C-201ENST00000249837 PFN1P07737 140 aaKnown RBP3.84□□□□□ -1.79
VPS13C-201ENST00000249837 LCN12Q6JVE5 192 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms