RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 Q8TCH9 128 aa7.02□□□□□ -1.29
VPS4B-201ENST00000238497 CIB3Q96Q77 187 aaPredicted RBP7.02□□□□□ -1.29
VPS4B-201ENST00000238497 ARV1Q9H2C2 271 aa7.02□□□□□ -1.29
VPS4B-201ENST00000238497 KIAA1456Q9P272 454 aa7.02□□□□□ -1.29
VPS4B-201ENST00000238497 OR51B2Q9Y5P1 312 aa7.02□□□□□ -1.29
VPS4B-201ENST00000238497 TRAV20A0A0B4J274 112 aa7.02□□□□□ -1.29
VPS4B-201ENST00000238497 YPEL1O60688 119 aa7.02□□□□□ -1.29
VPS4B-201ENST00000238497 IGHV2-5P01817 119 aa7.02□□□□□ -1.29
VPS4B-201ENST00000238497 ACAA1P09110 424 aaPredicted RBP7.02□□□□□ -1.29
VPS4B-201ENST00000238497 RAB5BP61020 215 aa7.02□□□□□ -1.29
VPS4B-201ENST00000238497 ICAM4Q14773 271 aa7.02□□□□□ -1.29
VPS4B-201ENST00000238497 HCP5Q6MZN7 132 aa7.02□□□□□ -1.29
VPS4B-201ENST00000238497 TRAT1Q6PIZ9 186 aa7.02□□□□□ -1.29
VPS4B-201ENST00000238497 ZNF600Q6ZNG1 722 aa7.02□□□□□ -1.29
VPS4B-201ENST00000238497 FAM216AQ8WUB2 273 aa7.02□□□□□ -1.29
VPS4B-201ENST00000238497 C1orf159Q96HA4 380 aa7.02□□□□□ -1.29
VPS4B-201ENST00000238497 YPEL2Q96QA6 119 aa7.02□□□□□ -1.29
VPS4B-201ENST00000238497 C11orf1Q9H5F2 150 aa7.02□□□□□ -1.29
VPS4B-201ENST00000238497 PLEKHA3Q9HB20 300 aa7.02□□□□□ -1.29
VPS4B-201ENST00000238497 DNHD1Q96M86 4753 aa7.02□□□□□ -1.29
VPS4B-201ENST00000238497 CYB5BO43169 146 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 SLC25A17O43808 307 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 FOXH1O75593 365 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 APOA2P02652 100 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 SRP19P09132 144 aaKnown RBP7.01□□□□□ -1.29
VPS4B-201ENST00000238497 PSMB3P49720 205 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 RAB7AP51149 207 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 ARF6P62330 175 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 WDR25Q64LD2 544 aaPredicted RBP7.01□□□□□ -1.29
VPS4B-201ENST00000238497 ZNF788Q6ZQV5 615 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 ABHD5Q8WTS1 349 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 ACTR3CQ9C0K3 210 aaPredicted RBP7.01□□□□□ -1.29
VPS4B-201ENST00000238497 HILPDAQ9Y5L2 63 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 PGPEP1LA6NFU8 196 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 SRRM4A7MD48 611 aaKnown RBP7.01□□□□□ -1.29
VPS4B-201ENST00000238497 HAX1O00165 279 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 TCF21O43680 179 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 CA2P00918 260 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 IFNA1P01562 189 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 CTRB1P17538 263 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 NPY1RP25929 384 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 CDC34P49427 236 aaPredicted RBP7.01□□□□□ -1.29
VPS4B-201ENST00000238497 GNB2P62879 340 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 HES1Q14469 280 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 TMEM41BQ5BJD5 291 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 CTRB2Q6GPI1 263 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 C19orf35Q6ZS72 473 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 NPCDR1Q9BY65 106 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 C17orf112F2Z3M2 114 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 HRASP01112 189 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 LHBP01229 141 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 RBMS3Q6XE24 437 aaKnown RBP7.01□□□□□ -1.29
VPS4B-201ENST00000238497 OR10A7Q8NGE5 316 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 ZNF418Q8TF45 676 aaPredicted RBP7.01□□□□□ -1.29
VPS4B-201ENST00000238497 ZNF251Q9BRH9 671 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 GAL3ST2Q9H3Q3 398 aa7.01□□□□□ -1.29
VPS4B-201ENST00000238497 UNKLQ9H9P5 680 aaKnown RBP7.01□□□□□ -1.29
VPS4B-201ENST00000238497 TGIF2-C20orf24A0A0A6YYL0 155 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 C15orf62A8K5M9 175 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 TMEM178BH3BS89 294 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 OR10J4P0C629 311 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 BCL2P10415 239 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 CHRNA7P36544 502 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 NDUFA6P56556 154 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 SPCS3P61009 180 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 RHEBQ15382 184 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 DHRS7BQ6IAN0 325 aaPredicted RBP7□□□□□ -1.29
VPS4B-201ENST00000238497 TMEM14EPQ6UXP3 125 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 HIST1H2BAQ96A08 127 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 TVP23CQ96ET8 276 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 DUX5Q96PT3 197 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 RPH3ALQ9UNE2 315 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 OR7C2O60412 319 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 CT45A6P0DMU7 189 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 CT45A5P0DMU8 189 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 CT45A7P0DMV0 189 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 RPP30P78346 268 aaKnown RBP7□□□□□ -1.29
VPS4B-201ENST00000238497 FAM78BQ5VT40 261 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 TGIF2LXQ8IUE1 241 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 COMMD1Q8N668 190 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 SLC24A4Q8NFF2 622 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 NANPQ8TBE9 248 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 FLYWCH2Q96CP2 140 aaKnown RBP7□□□□□ -1.29
VPS4B-201ENST00000238497 RAB9BQ9NP90 201 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 TMEM160Q9NX00 188 aa7□□□□□ -1.29
VPS4B-201ENST00000238497 TOX4O94842 621 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 AVPP01185 164 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 WNT2P09544 360 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 RD3LP0DJH9 198 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 SAA1P0DJI8 122 aaPredicted RBP6.99□□□□□ -1.29
VPS4B-201ENST00000238497 ZFP36P26651 326 aaKnown RBP6.99□□□□□ -1.29
VPS4B-201ENST00000238497 RAB13P51153 203 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 LGALS4P56470 323 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 RELBQ01201 579 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 ACOT6Q3I5F7 207 aaPredicted RBP6.99□□□□□ -1.29
VPS4B-201ENST00000238497 OR8B3Q8NGG8 313 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 OR4P4Q8NGL7 312 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 OR8B2Q96RD0 313 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 CTSZQ9UBR2 303 aa6.99□□□□□ -1.29
VPS4B-201ENST00000238497 RPUSD1Q9UJJ7 312 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms