RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 ISLRO14498 428 aa11.49□□□□□ -0.57
NFKB1-201ENST00000226574 HOXB1P14653 301 aaPredicted RBP11.49□□□□□ -0.57
NFKB1-201ENST00000226574 MAS1LP35410 378 aa11.49□□□□□ -0.57
NFKB1-201ENST00000226574 KCNS1Q96KK3 526 aa11.49□□□□□ -0.57
NFKB1-201ENST00000226574 UQCR10Q9UDW1 63 aa11.49□□□□□ -0.57
NFKB1-201ENST00000226574 LEPROTL1O95214 131 aa11.49□□□□□ -0.57
NFKB1-201ENST00000226574 HLA-DQA1P01909 254 aa11.49□□□□□ -0.57
NFKB1-201ENST00000226574 S100A4P26447 101 aaKnown RBP11.49□□□□□ -0.57
NFKB1-201ENST00000226574 FAM27E3Q08E93 113 aa11.49□□□□□ -0.57
NFKB1-201ENST00000226574 FOXF2Q12947 444 aa11.49□□□□□ -0.57
NFKB1-201ENST00000226574 OR4B1Q8NGF8 309 aa11.49□□□□□ -0.57
NFKB1-201ENST00000226574 MAP1LC3CQ9BXW4 147 aa11.49□□□□□ -0.57
NFKB1-201ENST00000226574 UFC1Q9Y3C8 167 aa11.49□□□□□ -0.57
NFKB1-201ENST00000226574 RBFOX2O43251 390 aaKnown RBP eCLIP11.49□□□□□ -0.57
NFKB1-201ENST00000226574 S100A7P31151 101 aa11.49□□□□□ -0.57
NFKB1-201ENST00000226574 NMUP48645 174 aa11.49□□□□□ -0.57
NFKB1-201ENST00000226574 ZNF124Q15973 351 aa11.49□□□□□ -0.57
NFKB1-201ENST00000226574 LEMD1Q68G75 181 aa11.49□□□□□ -0.57
NFKB1-201ENST00000226574 ZNF497Q6ZNH5 498 aa11.49□□□□□ -0.57
NFKB1-201ENST00000226574 OR9G1Q8NH87 305 aa11.49□□□□□ -0.57
NFKB1-201ENST00000226574 TIMD4Q96H15 378 aa11.49□□□□□ -0.57
NFKB1-201ENST00000226574 NDFIP1Q9BT67 221 aa11.49□□□□□ -0.57
NFKB1-201ENST00000226574 SEPSECSQ9HD40 501 aaKnown RBP11.49□□□□□ -0.57
NFKB1-201ENST00000226574 MYO18BQ8IUG5 2567 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 HYPMO75409 117 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 CFPP27918 469 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 LCN2P80188 198 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 ZNF738Q8NE65 137 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 TMEM106BQ9NUM4 274 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 IGHV3OR16-13A0A075B7E8 117 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 IGHV3-74A0A0B4J1X5 117 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 A8MWL6 223 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 TIMP3P35625 211 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 COMPP49747 757 aaPredicted RBP11.48□□□□□ -0.57
NFKB1-201ENST00000226574 PERPQ96FX8 193 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 C9orf172C9J069 976 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 MT-ND6P03923 174 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 PYYP10082 97 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 GZMBP10144 247 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 CCL3L1P16619 93 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 PLA2G5P39877 138 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 Q6ZT83 130 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 GTF2H5Q6ZYL4 71 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 IER2Q9BTL4 223 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 IL36BQ9NZH7 164 aa11.48□□□□□ -0.57
NFKB1-201ENST00000226574 TEX50A0A1B0GTY4 177 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 PPOXP50336 477 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 PAX9P55771 341 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 MLANAQ16655 118 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 LINC01551Q86U37 167 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 DTX1Q86Y01 620 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 TMEM45BQ96B21 275 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 TMUB1Q9BVT8 246 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 LPAR2Q9HBW0 351 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 NRN1Q9NPD7 142 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 PPIAL4EA0A075B759 164 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 LINC00473A8K010 186 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 PPIAL4DF5H284 164 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 PPIAL4FP0DN26 164 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 RPL27AP46776 148 aaKnown RBP11.47□□□□□ -0.57
NFKB1-201ENST00000226574 IL15RAQ13261 267 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 TMEM42Q69YG0 159 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 PPIAL4AQ9Y536 164 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 IFNL4K9M1U5 179 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 GNG5P63218 68 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 C10orf55Q5SWW7 151 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 ASPHD1Q5U4P2 390 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 LCN12Q6JVE5 192 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 OR10W1Q8NGF6 305 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 SRSF12Q8WXF0 261 aaKnown RBP11.47□□□□□ -0.57
NFKB1-201ENST00000226574 ZNF714Q96N38 554 aa11.47□□□□□ -0.57
NFKB1-201ENST00000226574 TRAV5A0A0B4J249 113 aa11.46□□□□□ -0.57
NFKB1-201ENST00000226574 FOXH1O75593 365 aa11.46□□□□□ -0.57
NFKB1-201ENST00000226574 ACSF3Q4G176 576 aaPredicted RBP11.46□□□□□ -0.57
NFKB1-201ENST00000226574 ZNF585BQ52M93 769 aa11.46□□□□□ -0.57
NFKB1-201ENST00000226574 WDR82Q6UXN9 313 aa11.46□□□□□ -0.57
NFKB1-201ENST00000226574 GOLT1AQ6ZVE7 132 aa11.46□□□□□ -0.57
NFKB1-201ENST00000226574 JPT1Q9UK76 154 aa11.46□□□□□ -0.57
NFKB1-201ENST00000226574 LBHQ53QV2 105 aaPredicted RBP11.46□□□□□ -0.57
NFKB1-201ENST00000226574 WFDC3Q8IUB2 231 aa11.46□□□□□ -0.57
NFKB1-201ENST00000226574 RALYQ9UKM9 306 aaKnown RBP11.46□□□□□ -0.57
NFKB1-201ENST00000226574 PRR33A8MZF0 331 aa11.46□□□□□ -0.58
NFKB1-201ENST00000226574 IL18BPO95998 194 aa11.46□□□□□ -0.58
NFKB1-201ENST00000226574 IGHV2-5P01817 119 aa11.46□□□□□ -0.58
NFKB1-201ENST00000226574 CRYABP02511 175 aaKnown RBP11.46□□□□□ -0.58
NFKB1-201ENST00000226574 COX19Q49B96 90 aa11.46□□□□□ -0.58
NFKB1-201ENST00000226574 TEX38Q6PEX7 206 aa11.46□□□□□ -0.58
NFKB1-201ENST00000226574 TXNDC17Q9BRA2 123 aa11.46□□□□□ -0.58
NFKB1-201ENST00000226574 HSPB7Q9UBY9 170 aa11.46□□□□□ -0.58
NFKB1-201ENST00000226574 ANKHD1Q8IWZ3 2542 aaKnown RBP11.46□□□□□ -0.58
NFKB1-201ENST00000226574 IGHV2-70P01814 119 aa11.45□□□□□ -0.58
NFKB1-201ENST00000226574 ACP1P24666 158 aa11.45□□□□□ -0.58
NFKB1-201ENST00000226574 FOXC1Q12948 553 aa11.45□□□□□ -0.58
NFKB1-201ENST00000226574 EFNB3Q15768 340 aa11.45□□□□□ -0.58
NFKB1-201ENST00000226574 TREML4Q6UXN2 200 aa11.45□□□□□ -0.58
NFKB1-201ENST00000226574 LINC00305Q7Z4B0 112 aa11.45□□□□□ -0.58
NFKB1-201ENST00000226574 GTF3AQ92664 365 aaKnown RBP11.45□□□□□ -0.58
NFKB1-201ENST00000226574 WDR83OSQ9Y284 106 aa11.45□□□□□ -0.58
NFKB1-201ENST00000226574 CORTO00230 105 aa11.45□□□□□ -0.58
NFKB1-201ENST00000226574 EREGO14944 169 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms