RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 S1PR2O95136 353 aa17.79■□□□□ 0.44
HOXC8-201ENST00000040584 G6PCP35575 357 aa17.79■□□□□ 0.44
HOXC8-201ENST00000040584 LDLRAD2Q5SZI1 272 aa17.79■□□□□ 0.44
HOXC8-201ENST00000040584 LINC01356Q8N9X3 169 aa17.79■□□□□ 0.44
HOXC8-201ENST00000040584 OR10P1Q8NGE3 313 aa17.79■□□□□ 0.44
HOXC8-201ENST00000040584 HIF1ANQ9NWT6 349 aa17.79■□□□□ 0.44
HOXC8-201ENST00000040584 ODF3BA8MYP8 253 aa17.78■□□□□ 0.44
HOXC8-201ENST00000040584 KIR2DS2P43631 304 aa17.78■□□□□ 0.44
HOXC8-201ENST00000040584 LCN15Q6UWW0 184 aa17.78■□□□□ 0.44
HOXC8-201ENST00000040584 AMMECR1Q9Y4X0 333 aaPredicted RBP17.78■□□□□ 0.44
HOXC8-201ENST00000040584 RAB11AP62491 216 aa17.78■□□□□ 0.44
HOXC8-201ENST00000040584 FABP9Q0Z7S8 132 aa17.78■□□□□ 0.44
HOXC8-201ENST00000040584 ZNF726P1Q15940 193 aa17.78■□□□□ 0.44
HOXC8-201ENST00000040584 TGIF2LXQ8IUE1 241 aa17.78■□□□□ 0.44
HOXC8-201ENST00000040584 FOXC2Q99958 501 aa17.78■□□□□ 0.44
HOXC8-201ENST00000040584 MAP1LC3B2A6NCE7 125 aa17.77■□□□□ 0.43
HOXC8-201ENST00000040584 ZFP92A6NM28 416 aa17.77■□□□□ 0.43
HOXC8-201ENST00000040584 LY6LH3BQJ8 138 aa17.77■□□□□ 0.43
HOXC8-201ENST00000040584 HTR1DP28221 377 aa17.77■□□□□ 0.43
HOXC8-201ENST00000040584 FAM90A2PQ658T7 463 aa17.77■□□□□ 0.43
HOXC8-201ENST00000040584 DTD1Q8TEA8 209 aa17.77■□□□□ 0.43
HOXC8-201ENST00000040584 MAP1LC3BQ9GZQ8 125 aa17.77■□□□□ 0.43
HOXC8-201ENST00000040584 CR1P17927 2039 aa17.76■□□□□ 0.43
HOXC8-201ENST00000040584 TRAV20A0A0B4J274 112 aa17.76■□□□□ 0.43
HOXC8-201ENST00000040584 HPRT1P00492 218 aa17.76■□□□□ 0.43
HOXC8-201ENST00000040584 FBP1P09467 338 aa17.76■□□□□ 0.43
HOXC8-201ENST00000040584 RPS10P46783 165 aaKnown RBP17.76■□□□□ 0.43
HOXC8-201ENST00000040584 RPP30P78346 268 aaKnown RBP17.76■□□□□ 0.43
HOXC8-201ENST00000040584 ELOBQ15370 118 aa17.76■□□□□ 0.43
HOXC8-201ENST00000040584 OR8G2PQ6IF36 304 aa17.76■□□□□ 0.43
HOXC8-201ENST00000040584 LHFPL4Q7Z7J7 247 aa17.76■□□□□ 0.43
HOXC8-201ENST00000040584 OR4S2Q8NH73 311 aa17.76■□□□□ 0.43
HOXC8-201ENST00000040584 NABP2Q9BQ15 211 aa17.76■□□□□ 0.43
HOXC8-201ENST00000040584 CTDSP1Q9GZU7 261 aa17.76■□□□□ 0.43
HOXC8-201ENST00000040584 VSIRQ9H7M9 311 aa17.76■□□□□ 0.43
HOXC8-201ENST00000040584 UBE2L5PA0A1B0GUS4 154 aa17.75■□□□□ 0.43
HOXC8-201ENST00000040584 OR2B8PP59922 312 aa17.75■□□□□ 0.43
HOXC8-201ENST00000040584 VWC2Q2TAL6 325 aa17.75■□□□□ 0.43
HOXC8-201ENST00000040584 TMEM249Q2WGJ8 235 aa17.75■□□□□ 0.43
HOXC8-201ENST00000040584 OR5AN1Q8NGI8 311 aa17.75■□□□□ 0.43
HOXC8-201ENST00000040584 RPEQ96AT9 228 aa17.75■□□□□ 0.43
HOXC8-201ENST00000040584 C7orf69Q9H7B7 122 aa17.75■□□□□ 0.43
HOXC8-201ENST00000040584 DPM3Q9P2X0 92 aa17.75■□□□□ 0.43
HOXC8-201ENST00000040584 C17orf112F2Z3M2 114 aa17.75■□□□□ 0.43
HOXC8-201ENST00000040584 IGHV4-31P0DP07 118 aa17.75■□□□□ 0.43
HOXC8-201ENST00000040584 UBE2E1P51965 193 aa17.75■□□□□ 0.43
HOXC8-201ENST00000040584 SDF2L1Q9HCN8 221 aa17.75■□□□□ 0.43
HOXC8-201ENST00000040584 SLC35D1Q9NTN3 355 aa17.75■□□□□ 0.43
HOXC8-201ENST00000040584 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.75■□□□□ 0.43
HOXC8-201ENST00000040584 CTXND1A0A1B0GTU2 59 aa17.74■□□□□ 0.43
HOXC8-201ENST00000040584 PMS2P5A8MQ11 134 aa17.74■□□□□ 0.43
HOXC8-201ENST00000040584 H0YJW9 148 aa17.74■□□□□ 0.43
HOXC8-201ENST00000040584 CLDN34H7C241 214 aa17.74■□□□□ 0.43
HOXC8-201ENST00000040584 TGFAP01135 160 aa17.74■□□□□ 0.43
HOXC8-201ENST00000040584 ZNF709Q8N972 641 aa17.74■□□□□ 0.43
HOXC8-201ENST00000040584 ACTR3CQ9C0K3 210 aaPredicted RBP17.74■□□□□ 0.43
HOXC8-201ENST00000040584 HILPDAQ9Y5L2 63 aa17.74■□□□□ 0.43
HOXC8-201ENST00000040584 MARCH11A6NNE9 402 aa17.73■□□□□ 0.43
HOXC8-201ENST00000040584 ZNF727A8MUV8 499 aa17.73■□□□□ 0.43
HOXC8-201ENST00000040584 IGKV1-16P04430 117 aa17.73■□□□□ 0.43
HOXC8-201ENST00000040584 AARDQ4LEZ3 155 aa17.73■□□□□ 0.43
HOXC8-201ENST00000040584 TPTE2P1Q5T6R2 138 aa17.73■□□□□ 0.43
HOXC8-201ENST00000040584 MANBALQ9NQG1 85 aa17.73■□□□□ 0.43
HOXC8-201ENST00000040584 IGHV3-72A0A0B4J1Y9 119 aa17.73■□□□□ 0.43
HOXC8-201ENST00000040584 CENPVL3A0A0U1RRI6 287 aa17.73■□□□□ 0.43
HOXC8-201ENST00000040584 PSMB3P49720 205 aa17.73■□□□□ 0.43
HOXC8-201ENST00000040584 RND2P52198 227 aa17.73■□□□□ 0.43
HOXC8-201ENST00000040584 LGALS4P56470 323 aa17.73■□□□□ 0.43
HOXC8-201ENST00000040584 RTL8BQ17RB0 113 aa17.73■□□□□ 0.43
HOXC8-201ENST00000040584 CIARTQ8N365 385 aaPredicted RBP17.73■□□□□ 0.43
HOXC8-201ENST00000040584 R3HDM4Q96D70 268 aa17.73■□□□□ 0.43
HOXC8-201ENST00000040584 ZANQ9Y493 2812 aa17.73■□□□□ 0.43
HOXC8-201ENST00000040584 ZNF469Q96JG9 3925 aaPredicted RBP17.72■□□□□ 0.43
HOXC8-201ENST00000040584 IGHV1-3A0A0C4DH29 117 aa17.72■□□□□ 0.43
HOXC8-201ENST00000040584 CEBPZOSA8MTT3 80 aa17.72■□□□□ 0.43
HOXC8-201ENST00000040584 TMEM250H0YL14 139 aa17.72■□□□□ 0.43
HOXC8-201ENST00000040584 RBMXL2O75526 392 aaKnown RBP17.72■□□□□ 0.43
HOXC8-201ENST00000040584 APOA2P02652 100 aa17.72■□□□□ 0.43
HOXC8-201ENST00000040584 KIAA0141Q14154 515 aaPredicted RBP17.72■□□□□ 0.43
HOXC8-201ENST00000040584 MOB3BQ86TA1 216 aa17.72■□□□□ 0.43
HOXC8-201ENST00000040584 RPP25LQ8N5L8 163 aaKnown RBP17.72■□□□□ 0.43
HOXC8-201ENST00000040584 Q8WTZ3 238 aa17.72■□□□□ 0.43
HOXC8-201ENST00000040584 TMPRSS5Q9H3S3 457 aa17.72■□□□□ 0.43
HOXC8-201ENST00000040584 ITPR3Q14573 2671 aa17.72■□□□□ 0.43
HOXC8-201ENST00000040584 AKAP9Q99996 3911 aa17.72■□□□□ 0.43
HOXC8-201ENST00000040584 IGHV3OR16-10A0A075B7F0 116 aa17.71■□□□□ 0.43
HOXC8-201ENST00000040584 CYB5BO43169 146 aa17.71■□□□□ 0.43
HOXC8-201ENST00000040584 NQO2P16083 231 aa17.71■□□□□ 0.43
HOXC8-201ENST00000040584 FGF7P21781 194 aa17.71■□□□□ 0.43
HOXC8-201ENST00000040584 GATA3P23771 443 aa17.71■□□□□ 0.43
HOXC8-201ENST00000040584 CEACAM3P40198 252 aa17.71■□□□□ 0.43
HOXC8-201ENST00000040584 ELLP55199 621 aaPredicted RBP17.71■□□□□ 0.43
HOXC8-201ENST00000040584 VKORC1L1Q8N0U8 176 aa17.71■□□□□ 0.43
HOXC8-201ENST00000040584 OR52E5Q8NH55 327 aa17.71■□□□□ 0.43
HOXC8-201ENST00000040584 NAT8Q9UHE5 227 aa17.71■□□□□ 0.43
HOXC8-201ENST00000040584 CREBBPQ92793 2442 aa17.71■□□□□ 0.43
HOXC8-201ENST00000040584 HOXA5P20719 270 aa17.71■□□□□ 0.43
HOXC8-201ENST00000040584 FGF8P55075 233 aaPredicted RBP17.71■□□□□ 0.43
HOXC8-201ENST00000040584 MEF2BQ02080 365 aaPredicted RBP17.71■□□□□ 0.43
HOXC8-201ENST00000040584 SSX2Q16385 188 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms