RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Mrps10Q80ZK0 160 aaKnown RBP11.4□□□□□ -0.58
Pdgfra-205ENSMUST00000201711 C730034F03RikQ8BGL5 111 aa11.4□□□□□ -0.58
Pdgfra-205ENSMUST00000201711 Dhrs7cQ8CHS7 311 aa11.4□□□□□ -0.58
Pdgfra-205ENSMUST00000201711 Sun5Q9DA32 373 aa11.4□□□□□ -0.58
Pdgfra-205ENSMUST00000201711 Mnx1Q9QZW9 404 aa11.4□□□□□ -0.58
Pdgfra-205ENSMUST00000201711 Atoh7Q9Z2E5 149 aa11.4□□□□□ -0.58
Pdgfra-205ENSMUST00000201711 1700003H04RikE9PXM2 192 aa11.4□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Ifna2P01573 190 aa11.4□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Tppp2Q0P5Y3 170 aa11.4□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 AtcayQ8BHE3 372 aa11.4□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Gm9837Q8C607 126 aa11.4□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Epdr1Q99M71 224 aa11.4□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Lrrk1Q3UHC2 2014 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Dopey2Q3UHQ6 2295 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Lrrc3cA0A1B0GRI5 255 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Dpagt1P42867 410 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Pax9P47242 342 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Il11P47873 199 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Rims4P60191 269 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Mpc1P63030 109 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Cd84Q18PI6 329 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Hide1Q75VT8 222 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Gltpd2Q8K0R6 321 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Rab5aQ9CQD1 215 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Tmem239Q9DA47 151 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Zfpl1Q9DB43 310 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Ppp1r1aQ9ERT9 171 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Klk1b27Q9JM71 263 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Ctxnd2A0A1B0GQX3 59 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 BC035044E0CXF8 138 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Lin7cO88952 197 aaKnown RBP11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Spock1Q62288 442 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Zfp874bQ7M6X2 447 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Olfr1042Q7TR81 313 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Yif1aQ91XB7 293 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Ramp3Q9WUP1 147 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Gm5890A0A140LI04 305 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Gm20219A0A1B0GRQ3 87 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Zfp977L7N2E7 438 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 P18529 117 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Rtp3Q5QGU6 474 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Gpr4Q8BUD0 365 aa11.39□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Olfr1104A2AVB5 310 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Rdh16O54909 317 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 H2-Ab1P01921 265 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 P06344 263 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 P10404 641 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Lpar6Q8BMC0 344 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 RydenQ8CAK3 290 aaKnown RBP11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Vmn1r237Q8R296 289 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Sft2d2Q8VD57 159 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Olfr1368Q8VFG3 314 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Olfr362Q8VGV7 317 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Cela3bQ9CQ52 269 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Arpc1bQ9WV32 372 aaKnown RBP11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 AtmQ62388 3066 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Igkv6-14A0A140T8P1 115 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Gfra3O35118 397 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Igk-V19-17P01633 149 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Lyz1P17897 148 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Hist1h2baP70696 127 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Olfr138Q7TRI7 312 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Rab4bQ91ZR1 213 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 RhebQ921J2 184 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 1700029F12RikQ9CRB4 147 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Wrap73Q9JM98 462 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 BlnkQ9QUN3 457 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Gm4881A0A140LIR9 352 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 CfdP03953 259 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Mbnl3Q8R003 342 aaKnown RBP11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Gjc3Q921C1 269 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Ear10Q923L6 156 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Ssmem1Q9D9Y8 244 aa11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Chd7A2AJK6 2986 aaKnown RBP11.38□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Trav6n-7A0A075B6A6 116 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Lrrc29A0A1B0GQY9 621 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Chek1O35280 476 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 SftpcP21841 193 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Ube2g2P60605 165 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Ppp1ccP63087 323 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 CenptQ3TJM4 515 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Arl11Q6P3A9 176 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Tox3Q80W03 575 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Tm2d3Q8BJ83 261 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Olfr1444Q8VFX2 319 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Abhd14aQ922Q6 247 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Esp6A8R0U0 136 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Klri1B2KG20 248 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Olfr1406E9Q8X1 310 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Bmp8bP55105 399 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Rhox4gQ2MDF7 205 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Rhox4dQ2MDG0 205 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Rhox4eQ504P9 205 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Spata22Q5SV06 358 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Olfr632Q9EPN9 317 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 SelenofQ9ERR7 162 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Prss21Q9JHJ7 324 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Rhox4bQ9JI43 205 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Tnrc18Q80WC3 2878 aa11.37□□□□□ -0.59
Pdgfra-205ENSMUST00000201711 Ly6g6fB2RXM6 300 aa11.37□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 45.1 ms