RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 Icam2P35330 277 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Ankrd33bQ3U0L2 486 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 OacylQ8BML2 685 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Foxn4Q8K3Q3 521 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Gp2Q9D733 531 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Herpud1Q9JJK5 391 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 NpffQ9WVA8 114 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Cyb561d1A2AE42 229 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Hoxa3P02831 443 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Pcbp4P57724 403 aaKnown RBP12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 UcnP81615 122 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Masp1P98064 704 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 PnlipQ6P8U6 465 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Gpr84Q8CIM5 396 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Olfr1392Q8VFA6 311 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Olfr983Q8VG90 315 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Olfr829Q8VGX1 321 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 FibinQ9CQS3 217 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Trav5-4A0A075B652 114 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Gm36864A0A1Y7VJE6 447 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Rac3P60764 192 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Cxxc4Q6NXI8 198 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 TctaQ8VEA7 122 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Kcne4Q9WTW3 170 aa12.56□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Gm5426J3QNM7 103 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 P01808 119 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Hist1h2baP70696 127 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Cd55bQ61476 407 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Tnfsf18Q7TS55 173 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Rhebl1Q9D8T3 184 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Igkv1-131A0A140T8M8 120 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Olfr906K7N5P3 311 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Hspb7P35385 169 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Siah2Q06986 325 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Olfr1246Q7TQZ6 314 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Ppp1r14dQ7TT52 146 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 AdtrpQ8C138 230 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Defb21Q8C5Z4 100 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Rhbdd2Q8VEK2 361 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Dram1Q9DC58 238 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Gm5093E9PZB3 174 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Gpx4Q91XR9 253 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Olfr934Q9EQ87 310 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Gli3Q61602 1583 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Megf6Q80V70 1572 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Sh2d1bO35324 132 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 P01806 116 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Defa9P50707 93 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Alkbh6Q8K2U2 238 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Mmp21Q8K3F2 568 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Olfr508Q8VG42 310 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Nus1Q99LJ8 297 aa12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Utp23Q9CX11 249 aaKnown RBP12.55□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Trpm6Q8CIR4 2028 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Arfgef1G3X9K3 1846 aaKnown RBP12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Ighv5-15A0A0A6YWC7 117 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Olfr1245A0A1L1SQJ6 307 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Zfp108E9Q8I5 642 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Olfr905L7N1X5 310 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Dll3O88516 592 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Wnt1P04426 370 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Defa-rs1P17533 116 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Olfr1356Q7TQU8 320 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Glrx5Q80Y14 152 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 H1fooQ8VIK3 304 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 MosP00536 390 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Sf3b6P59708 125 aaKnown RBP12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Q497N7 227 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Oas1bQ60856 376 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 BC049730Q810N3 246 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Ssmem1Q9D9Y8 244 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Q9DAF8 208 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Mpdu1Q9R0Q9 247 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Olfr898L7N1Z5 316 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Gpr4Q8BUD0 365 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Fam219aQ9D772 157 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Trip11E9Q512 1976 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Olfr218E9PWV2 313 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Emp2O88662 172 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Ppp1caP62137 330 aaKnown RBP12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Olfr16Q62007 309 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Olfr1002Q8VFK2 318 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Arrdc2Q9D668 407 aa12.54□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Tarm1B6A8R8 288 aa12.53□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Nat8f4G5E8L3 226 aa12.53□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Syngr2O55101 224 aa12.53□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 P01795 144 aa12.53□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Wnt10aP70701 417 aa12.53□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Nkx3-1P97436 237 aa12.53□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Defb20Q30KP3 96 aa12.53□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 BivmQ8CBX9 502 aa12.53□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Gab2Q9Z1S8 665 aa12.53□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Ighv14-4A0A0A6YVR1 117 aa12.53□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Igkv12-44A0A140T8M2 115 aa12.53□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Olfr978E9Q985 311 aa12.53□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Vmn1r167G3UW71 315 aa12.53□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 P01661 131 aa12.53□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 P01662 111 aa12.53□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 P01663 111 aa12.53□□□□□ -0.4
Pcdha8-201ENSMUST00000194038 Olfr1168Q7TR25 312 aa12.53□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 97.4 ms