RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Prss45Q8K4I7 317 aa17.62■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Serpinb1bQ8VHP7 382 aa17.62■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Scrt1Q99M85 348 aa17.62■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 GhsrQ99P50 364 aa17.62■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Arv1Q9D0U9 266 aa17.62■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 RbmxQ9WV02 391 aaKnown RBP17.62■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Olfr918E9PVZ7 325 aa17.61■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 GzmaP11032 260 aa17.61■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 PtgirP43252 415 aa17.61■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Olfr25Q7TRD6 313 aa17.61■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Olfr874Q7TRE6 310 aa17.61■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Cbln4Q8BME9 198 aa17.61■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Pdcd10Q8VE70 212 aa17.61■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Olfr101Q920Z0 308 aa17.61■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Fxyd6Q9D164 94 aa17.61■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Smg1Q8BKX6 3658 aaKnown RBP17.61■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 CadB2RQC6 2225 aa17.61■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 6430628N08RikA0A0U1RQ45 177 aa17.61■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Lnp1A0A1B0GSK3 178 aa17.61■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Esp15A8R0U8 85 aa17.61■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 1700003H04RikE9PXM2 192 aa17.61■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Vmn2r83E9Q0G7 864 aa17.61■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Q3KQP7 184 aa17.61■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Dctn5Q9QZB9 182 aa17.61■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Cldn15Q9Z0S5 227 aa17.61■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Gm2381G3UY53 305 aa17.6■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Vmn1r14H3BJ46 303 aa17.6■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Gm21972J3QN38 98 aa17.6■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 IappP12968 93 aa17.6■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Rab18P35293 206 aa17.6■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Rnd3P61588 244 aa17.6■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Zfp72Q0VFY0 435 aa17.6■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Klf14Q19A41 325 aa17.6■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Olfr504Q7TRU7 318 aa17.6■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Tmem106bQ80X71 275 aa17.6■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Ahsa1Q8BK64 338 aa17.6■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Dnttip1Q99LB0 328 aa17.6■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Q9DAF8 208 aa17.6■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Pm20d2A3KG59 431 aa17.59■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Gm5286E0CXI6 357 aa17.59■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Mex3aG3UYU0 520 aaKnown RBP17.59■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Gm3685J3QPP2 205 aa17.59■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Gm10338K7N692 204 aa17.59■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Olfr628K7N6B2 316 aa17.59■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Kcnk3O35111 409 aa17.59■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 CideaO70302 217 aa17.59■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 AmbpQ07456 349 aa17.59■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Olfr921Q7TRC0 313 aa17.59■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Commd7Q8BG94 200 aa17.59■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Aimp2Q8R010 320 aa17.59■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Olfr1298Q8VGE6 312 aa17.59■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Olfr1272Q8VGN8 308 aa17.59■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Olfr1044Q8VGR9 314 aa17.59■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Olfr669Q8VGU9 317 aa17.59■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Q8WUR0 141 aa17.59■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 FrkQ922K9 512 aa17.59■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Msmo1Q9CRA4 293 aa17.59■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Ighv5-12A0A075B5Q4 117 aa17.58■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Olfr588-ps1A0A1B0GSZ2 313 aa17.58■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 OdamA1E960 273 aa17.58■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 eef1akmt3D3YWP0 232 aa17.58■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Gabrr1P56475 480 aa17.58■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Yes1Q04736 541 aaKnown RBP17.58■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Prrx2Q06348 247 aa17.58■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Q3U595 105 aa17.58■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Slc25a41Q8BVN7 312 aa17.58■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Mrpl41Q9CQN7 135 aaKnown RBP17.58■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Immp1lQ9CQU8 166 aa17.58■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Uqcrfs1Q9CR68 274 aa17.58■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Mgat4cQ9D306 478 aa17.58■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Prss21Q9JHJ7 324 aa17.58■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Tmprss2Q9JIQ8 490 aa17.58■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Dscaml1Q4VA61 2053 aa17.58■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 RnlsA7RDN6 342 aa17.58■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Nxph4G3X9N5 304 aa17.58■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Gsc2P56916 198 aa17.58■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Masp1P98064 704 aa17.58■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Clec12bQ149M0 275 aa17.58■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Rnft2Q3UF64 445 aa17.58■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Xaf1Q5NBU8 273 aa17.58■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Pom121l2Q5SW25 972 aa17.58■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Tmem204Q7TQI0 226 aa17.58■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Lcn10Q810Z1 182 aa17.58■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Q8BR90 294 aa17.58■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Fam169bQ8CHT6 337 aa17.58■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 StradbQ8K4T3 418 aa17.58■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Olfr1388Q8VFA3 311 aa17.58■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Olfr401Q8VFX6 315 aa17.58■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Olfr126Q8VGF0 319 aa17.58■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Abhd14aQ922Q6 247 aa17.58■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Vstm5Q9D806 199 aa17.58■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Sult6b2B7ZWN4 290 aa17.57■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Gm43720E0CXM8 267 aa17.57■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 P01725 110 aa17.57■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Rab3dP35276 219 aa17.57■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Tmem40Q4FJU9 225 aa17.57■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Kiaa0513Q8R0A7 407 aa17.57■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Lcn8Q924P3 175 aa17.57■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 Rab1bQ9D1G1 201 aa17.57■□□□□ 0.4
Ccdc88a-202ENSMUST00000109477 St6galnac5Q9QYJ1 336 aa17.57■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms