RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Tcfl5Q32NY8 489 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Mogat2Q80W94 334 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Tmem255aQ8BHW5 351 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 4933402D24RikQ9D4D3 167 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Rhebl1Q9D8T3 184 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Fzd5Q9EQD0 585 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr1214A2ATG3 311 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Wnt10aP70701 417 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Asphd2Q80VP9 343 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr1413Q8VGU3 323 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Igkv1-132A0A0B4J1H9 120 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Ighv9-2A0A0B4J1J4 117 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Vmn1r115K7N6Y3 295 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Ppp1ccP63087 323 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Gm29776A0A286YEC0 699 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr147Q60886 317 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr153Q7TR48 307 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr95Q8VFE2 312 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Tmed6Q9CQG0 239 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 FibinQ9CQS3 217 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Fiz1Q9WTJ4 500 aa10.54□□□□□ -0.72
Trim56-201ENSMUST00000054384 Gm13083A2AGW5 501 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr906K7N5P3 311 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Pitx3O35160 302 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Nkx2-2P42586 273 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 CtdsplP58465 276 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 MestQ07646 335 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr180Q7TS48 317 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr494Q8VG07 314 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Kiss1rQ91V45 396 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Hist1h1eP43274 219 aaKnown RBP10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Mpc1P63030 109 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Pafah1b2Q61206 229 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 R3hdmlA2A5I3 253 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr332Q5NC45 344 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 GcsamQ6RFH4 181 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Defb35Q8R2I3 63 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Ighv7-1A0A075B5S2 121 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Igkv5-39A0A0G2JDV4 115 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Lnp1A0A1B0GSK3 178 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Ppt2O35448 302 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Edil3O35474 480 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Vmn1r181Q0P547 304 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Cd52Q64389 74 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Rtn4rl1Q8K0S5 445 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Ido2Q8R0V5 405 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr493Q8VEW5 314 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 P01803 113 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Cdx4Q07424 282 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Kbtbd11Q8BNW9 633 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 D330020A13RikQ8C799 211 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Gm15013V9GWY0 266 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Tcf21O35437 179 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Wnt2bO70283 389 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Nup37Q9CWU9 326 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Dynlrb2Q9DAJ5 96 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Igkv16-104A0A0B4J1I1 116 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Zfp433A0A0J9YUD4 600 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Gm32687A0A1W2P6H7 600 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Mgst2A2RST1 147 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr152G3X9L8 316 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Rtl4Q3URY0 304 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Defa-rs10Q64263 91 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 TxnipQ8BG60 397 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 Rab11fip5Q8R361 645 aa10.53□□□□□ -0.72
Trim56-201ENSMUST00000054384 P18529 117 aa10.52□□□□□ -0.72
Trim56-201ENSMUST00000054384 Fam109bQ14B98 259 aa10.52□□□□□ -0.72
Trim56-201ENSMUST00000054384 NotoQ5TIS6 240 aa10.52□□□□□ -0.72
Trim56-201ENSMUST00000054384 Olfr482Q8VG03 323 aa10.52□□□□□ -0.72
Trim56-201ENSMUST00000054384 Pbp2Q8VIN1 187 aa10.52□□□□□ -0.72
Trim56-201ENSMUST00000054384 Gm45861A0A1B0GRY3 1923 aa10.52□□□□□ -0.72
Trim56-201ENSMUST00000054384 Gimap1P70224 277 aa10.52□□□□□ -0.72
Trim56-201ENSMUST00000054384 Mrpl33Q9CQP0 65 aa10.52□□□□□ -0.72
Trim56-201ENSMUST00000054384 Otud1Q9CUB6 454 aa10.52□□□□□ -0.72
Trim56-201ENSMUST00000054384 Ssmem1Q9D9Y8 244 aa10.52□□□□□ -0.72
Trim56-201ENSMUST00000054384 Rbmxl2Q9DAE2 385 aaKnown RBP10.52□□□□□ -0.72
Trim56-201ENSMUST00000054384 PappaQ8R4K8 1624 aa10.52□□□□□ -0.72
Trim56-201ENSMUST00000054384 Trbv21A0A0A6YX06 97 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 Olfr191L7N1Z8 309 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 Klf9O35739 244 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 NcanP55066 1268 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 Znf488Q5HZG9 337 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 Prss35Q8C0F9 409 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 Fgfrl1Q91V87 529 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 P01795 144 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 Olfr1333Q7TQV7 317 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 Fahd1Q8R0F8 227 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 Ppp1r27Q9D119 154 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 Ube2v2Q9D2M8 145 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 Aifm1Q9Z0X1 612 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 Abhd16bQ80YU0 474 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 Slc16a12Q8BGC3 486 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 Olfr1440Q8VFV4 315 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 Ppil1Q9D0W5 166 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 Col13a1Q9R1N9 751 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 Rp1P56716 2095 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 Zfp407G3UVV3 2246 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 G0s2Q61585 103 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 Olfr1181Q7TR18 311 aa10.52□□□□□ -0.73
Trim56-201ENSMUST00000054384 Cbln4Q8BME9 198 aa10.52□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms