RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Mien1Q9CQ86 115 aa12.7□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 TrioQ0KL02 3102 aa12.7□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Trav15-2-dv6-2A0A075B650 123 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Scgb1b15A0A087WP50 93 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Kcnk15B2RVL1 343 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Gm43517E9PYS1 339 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Gm2663F6R7E8 247 aaKnown RBP12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Gm3486L7N2D0 199 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 P01798 113 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Cited1P97769 203 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Gm9Q3UKW5 162 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Vdac1Q60932 296 aaKnown RBP12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Rab35Q6PHN9 201 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Plcxd3Q8BLJ3 321 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Olfr223Q8VF69 319 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Olfr507Q8VG13 316 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Olfr1339Q8VGB1 315 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 B3gnt9Q8VI16 399 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Olfr101Q920Z0 308 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Tm2d1Q99MB3 208 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 1810009J06RikQ9CPN7 247 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Ctag2Q9D9S4 219 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 2410004P03RikA0A087WQY2 205 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Gm13083A2AGW5 501 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Zfp108E9Q8I5 642 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Znf431E9QAG8 526 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Tcf21O35437 179 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Gm21943Q5FWD5 227 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Olfr94Q6UAH0 386 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 TpppQ7TQD2 218 aaKnown RBP12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Nanos1Q80WY3 267 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Ppp1r3bQ8C767 284 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Rab40cQ8VHQ4 281 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Chrdl1Q920C1 447 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Map1lc3bQ9CQV6 125 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Hdhd3Q9CYW4 251 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Vmn1r54Q9EPB8 315 aa12.69□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Olfr1089A0A1L1SRK6 311 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Igkv7-33P01632 114 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Hnf1aP22361 628 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Cks2P56390 79 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Tpt1P63028 172 aaKnown RBP12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Rtl6Q505G4 243 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 ParlQ5XJY4 377 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Zfp85Q7TMC9 473 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Ifna13Q80SU4 189 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Psg22Q810J1 475 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Cnot4Q8BT14 575 aaKnown RBP12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Tmem70Q921N7 253 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Ms4a6bQ99N09 244 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Gng10Q9CXP8 68 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Mrpl30Q9D7N6 160 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Klk4Q9Z0M1 255 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Wdfy3Q6VNB8 3508 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Rhox7aA2A4F1 281 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Pwwp2bE9Q9M8 600 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 CckarO08786 436 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 TymsP07607 307 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Rpl23P62830 140 aaKnown RBP12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Slc25a31Q3V132 320 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Tle1Q62440 770 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 BtlaQ7TSA3 306 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Pgam5Q8BX10 288 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Phf13Q8K2W6 296 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Slc6a8Q8VBW1 640 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Thoc3Q8VE80 351 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Tmbim7Q9D592 302 aa12.68□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Gm28372A0A087WNV0 220 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Igkv6-32A0A140T8N9 115 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Gm15821A6X8J8 139 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Olfr64F8VPZ8 307 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Gm20821J3QPJ2 227 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Zfand5O88878 213 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Nudt10P0C027 164 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Nudt11P0C028 164 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Klk1b5P15945 261 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 NracQ8BNX7 165 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Znf574Q8BY46 900 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Tmem41bQ8K1A5 291 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Vmn1r70Q8R254 298 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Olfr281Q8VET6 311 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Defb7Q91V70 71 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 BmfQ91ZE9 185 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Opn4Q9QXZ9 521 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Fzr1Q9R1K5 493 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Opn3Q9WUK7 400 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Tcrg-V4A0A0B4J1J8 138 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Gm4787B2RUD9 748 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Lhx4P53776 390 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Serf2P84102 59 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Mesp1P97309 243 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 VwceQ3U515 929 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Psg27Q497W2 474 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Tnfsf15Q5UBV8 252 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 PcolceQ61398 468 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 H2-M10.3Q85ZW6 330 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Vmn1r4Q8R2D3 297 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Rnps1Q99M28 305 aaKnown RBP12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Nkg7Q99PA5 165 aa12.67□□□□□ -0.38
Ushbp1-201ENSMUST00000049184 Tm7sf3Q9CRG1 565 aa12.67□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 74.7 ms