RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 TAF15Q92804 592 aaKnown RBP eCLIP8.31□□□□□ -1.08
PHGDH-224ENST00000641711 RBMXL1Q96E39 390 aaKnown RBP8.31□□□□□ -1.08
PHGDH-224ENST00000641711 ZNF714Q96N38 554 aa8.31□□□□□ -1.08
PHGDH-224ENST00000641711 QTRT1Q9BXR0 403 aaKnown RBP8.31□□□□□ -1.08
PHGDH-224ENST00000641711 SIRPDQ9H106 197 aa8.31□□□□□ -1.08
PHGDH-224ENST00000641711 GSX1Q9H4S2 264 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-224ENST00000641711 TMEM140Q9NV12 185 aa8.31□□□□□ -1.08
PHGDH-224ENST00000641711 A0A087X0M5 115 aa8.3□□□□□ -1.08
PHGDH-224ENST00000641711 A0A1B0GX30 115 aa8.3□□□□□ -1.08
PHGDH-224ENST00000641711 C15orf62A8K5M9 175 aa8.3□□□□□ -1.08
PHGDH-224ENST00000641711 CRLF1O75462 422 aa8.3□□□□□ -1.08
PHGDH-224ENST00000641711 NFYBP25208 207 aa8.3□□□□□ -1.08
PHGDH-224ENST00000641711 VDAC2P45880 294 aaPredicted RBP8.3□□□□□ -1.08
PHGDH-224ENST00000641711 DLX6P56179 175 aa8.3□□□□□ -1.08
PHGDH-224ENST00000641711 PMS2P11Q13670 270 aa8.3□□□□□ -1.08
PHGDH-224ENST00000641711 LURAP1LQ8IV03 231 aa8.3□□□□□ -1.08
PHGDH-224ENST00000641711 LEAP2Q969E1 77 aa8.3□□□□□ -1.08
PHGDH-224ENST00000641711 AIFM2Q9BRQ8 373 aa8.3□□□□□ -1.08
PHGDH-224ENST00000641711 GGACTQ9BVM4 153 aa8.3□□□□□ -1.08
PHGDH-224ENST00000641711 SLC35B3Q9H1N7 401 aa8.3□□□□□ -1.08
PHGDH-224ENST00000641711 RPRMQ9NS64 109 aa8.3□□□□□ -1.08
PHGDH-224ENST00000641711 FOXA2Q9Y261 457 aaPredicted RBP8.3□□□□□ -1.08
PHGDH-224ENST00000641711 FBXO7Q9Y3I1 522 aa8.3□□□□□ -1.08
PHGDH-224ENST00000641711 A0A1W2PPE3 182 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 RBFOX3A6NFN3 312 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 FAM74A7A6NL05 159 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 C15orf61A6NNL5 157 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 INAFM1C9JVW0 142 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 SOX15O60248 233 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 RBMXL2O75526 392 aaKnown RBP8.29□□□□□ -1.08
PHGDH-224ENST00000641711 TOX4O94842 621 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 HRASP01112 189 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 IFNA17P01571 189 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 IGHV3-7P01780 117 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 CT45A6P0DMU7 189 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 CT45A5P0DMU8 189 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 CT45A7P0DMV0 189 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 SRD5A1P18405 259 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 PRTN3P24158 256 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 SRP14P37108 136 aaKnown RBP8.29□□□□□ -1.08
PHGDH-224ENST00000641711 PPT1P50897 306 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 ZNF137PP52743 207 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 ERVFRD-1P60508 538 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 CCL20P78556 96 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 RTL8BQ17RB0 113 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 FAM74A3Q4VXF1 159 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 TMEM41BQ5BJD5 291 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 ZNF506Q5JVG8 444 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 OR8G2PQ6IF36 304 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 C9orf139Q6ZV77 190 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-224ENST00000641711 CLRN3Q8NCR9 226 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 CLCC1Q96S66 551 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 RSG1Q9BU20 258 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 EIF5A2Q9GZV4 153 aaKnown RBP8.29□□□□□ -1.08
PHGDH-224ENST00000641711 TMEM14BQ9NUH8 114 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 ONECUT1Q9UBC0 465 aa8.29□□□□□ -1.08
PHGDH-224ENST00000641711 UBE2L5PA0A1B0GUS4 154 aa8.28□□□□□ -1.08
PHGDH-224ENST00000641711 MBP02144 154 aa8.28□□□□□ -1.08
PHGDH-224ENST00000641711 HSPB1P04792 205 aaKnown RBP8.28□□□□□ -1.08
PHGDH-224ENST00000641711 NPBWR1P48145 328 aa8.28□□□□□ -1.08
PHGDH-224ENST00000641711 GNG10P50151 68 aa8.28□□□□□ -1.08
PHGDH-224ENST00000641711 OR2B8PP59922 312 aa8.28□□□□□ -1.08
PHGDH-224ENST00000641711 HSPE1P61604 102 aaKnown RBP8.28□□□□□ -1.08
PHGDH-224ENST00000641711 KHDC3LQ587J8 217 aa8.28□□□□□ -1.08
PHGDH-224ENST00000641711 OR4A47Q6IF82 309 aa8.28□□□□□ -1.08
PHGDH-224ENST00000641711 OR10G4Q8NGN3 311 aa8.28□□□□□ -1.08
PHGDH-224ENST00000641711 SFT2D1Q8WV19 159 aa8.28□□□□□ -1.08
PHGDH-224ENST00000641711 C17orf50Q8WW18 174 aa8.28□□□□□ -1.08
PHGDH-224ENST00000641711 RHOVQ96L33 236 aa8.28□□□□□ -1.08
PHGDH-224ENST00000641711 TBX15Q96SF7 602 aa8.28□□□□□ -1.08
PHGDH-224ENST00000641711 SLC35D1Q9NTN3 355 aa8.28□□□□□ -1.08
PHGDH-224ENST00000641711 TCF19Q9Y242 345 aa8.28□□□□□ -1.08
PHGDH-224ENST00000641711 ZNF257Q9Y2Q1 563 aa8.28□□□□□ -1.08
PHGDH-224ENST00000641711 NIPBLQ6KC79 2804 aaeCLIP8.27□□□□□ -1.09
PHGDH-224ENST00000641711 TRAV3A0A0B4J244 114 aa8.27□□□□□ -1.09
PHGDH-224ENST00000641711 TRAV40A0A0B4J280 105 aa8.27□□□□□ -1.09
PHGDH-224ENST00000641711 LOC105371267A0A1B0GV96 52 aa8.27□□□□□ -1.09
PHGDH-224ENST00000641711 PRSS46E5RG02 174 aa8.27□□□□□ -1.09
PHGDH-224ENST00000641711 UPK2O00526 184 aa8.27□□□□□ -1.09
PHGDH-224ENST00000641711 TSPAN4O14817 238 aa8.27□□□□□ -1.09
PHGDH-224ENST00000641711 NDUFS6O75380 124 aaKnown RBP8.27□□□□□ -1.09
PHGDH-224ENST00000641711 SRP19P09132 144 aaKnown RBP8.27□□□□□ -1.09
PHGDH-224ENST00000641711 CCL3L1P16619 93 aa8.27□□□□□ -1.09
PHGDH-224ENST00000641711 FGF7P21781 194 aa8.27□□□□□ -1.09
PHGDH-224ENST00000641711 ATP5IP56385 69 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-224ENST00000641711 ARF6P62330 175 aa8.27□□□□□ -1.09
PHGDH-224ENST00000641711 DLK1P80370 383 aa8.27□□□□□ -1.09
PHGDH-224ENST00000641711 ZNF726P1Q15940 193 aa8.27□□□□□ -1.09
PHGDH-224ENST00000641711 DMRTA1Q5VZB9 504 aa8.27□□□□□ -1.09
PHGDH-224ENST00000641711 SSX9Q7RTT3 188 aa8.27□□□□□ -1.09
PHGDH-224ENST00000641711 VMO1Q7Z5L0 202 aa8.27□□□□□ -1.09
PHGDH-224ENST00000641711 VKORC1L1Q8N0U8 176 aa8.27□□□□□ -1.09
PHGDH-224ENST00000641711 Q8N7P7 452 aa8.27□□□□□ -1.09
PHGDH-224ENST00000641711 OR5AN1Q8NGI8 311 aa8.27□□□□□ -1.09
PHGDH-224ENST00000641711 OSR1Q8TAX0 266 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-224ENST00000641711 RCC1LQ96I51 464 aaKnown RBP8.27□□□□□ -1.09
PHGDH-224ENST00000641711 PCGF1Q9BSM1 259 aa8.27□□□□□ -1.09
PHGDH-224ENST00000641711 BET1LQ9NYM9 111 aa8.27□□□□□ -1.09
PHGDH-224ENST00000641711 PRNDQ9UKY0 176 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms