RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 PRH1P02810 166 aa10.29□□□□□ -0.76
GTF3A-209ENST00000640289 TRAPPC2P0DI81 140 aa10.29□□□□□ -0.76
GTF3A-209ENST00000640289 TRAPPC2BP0DI82 140 aa10.29□□□□□ -0.76
GTF3A-209ENST00000640289 RAB9AP51151 201 aa10.29□□□□□ -0.76
GTF3A-209ENST00000640289 RPL23AP62750 156 aaKnown RBP10.29□□□□□ -0.76
GTF3A-209ENST00000640289 SRPXP78539 464 aa10.29□□□□□ -0.76
GTF3A-209ENST00000640289 SPINK9Q5DT21 86 aa10.29□□□□□ -0.76
GTF3A-209ENST00000640289 TMEM65Q6PI78 240 aa10.29□□□□□ -0.76
GTF3A-209ENST00000640289 FAM219AQ8IW50 185 aa10.29□□□□□ -0.76
GTF3A-209ENST00000640289 TTC9CQ8N5M4 171 aa10.29□□□□□ -0.76
GTF3A-209ENST00000640289 RNF152Q8N8N0 203 aa10.29□□□□□ -0.76
GTF3A-209ENST00000640289 LRTM2Q8N967 370 aa10.29□□□□□ -0.76
GTF3A-209ENST00000640289 DUSP18Q8NEJ0 188 aa10.29□□□□□ -0.76
GTF3A-209ENST00000640289 OR1L8Q8NGR8 309 aa10.29□□□□□ -0.76
GTF3A-209ENST00000640289 OR5B3Q8NH48 314 aa10.29□□□□□ -0.76
GTF3A-209ENST00000640289 LSM10Q969L4 123 aaKnown RBP10.29□□□□□ -0.76
GTF3A-209ENST00000640289 SEC22CQ9BRL7 303 aa10.29□□□□□ -0.76
GTF3A-209ENST00000640289 ALX4Q9H161 411 aaPredicted RBP10.29□□□□□ -0.76
GTF3A-209ENST00000640289 NDUFA4L2Q9NRX3 87 aa10.29□□□□□ -0.76
GTF3A-209ENST00000640289 COA4Q9NYJ1 87 aa10.29□□□□□ -0.76
GTF3A-209ENST00000640289 CACNG5Q9UF02 275 aa10.29□□□□□ -0.76
GTF3A-209ENST00000640289 SHPKQ9UHJ6 478 aa10.29□□□□□ -0.76
GTF3A-209ENST00000640289 TSSC4Q9Y5U2 329 aaPredicted RBP10.29□□□□□ -0.76
GTF3A-209ENST00000640289 IGLC7A0M8Q6 106 aa10.28□□□□□ -0.76
GTF3A-209ENST00000640289 ST8SIA3O43173 380 aa10.28□□□□□ -0.76
GTF3A-209ENST00000640289 NXPH3O95157 252 aa10.28□□□□□ -0.76
GTF3A-209ENST00000640289 SPNP16150 400 aa10.28□□□□□ -0.76
GTF3A-209ENST00000640289 MECP2P51608 486 aaKnown RBP10.28□□□□□ -0.76
GTF3A-209ENST00000640289 WT1-ASQ06250 92 aa10.28□□□□□ -0.76
GTF3A-209ENST00000640289 KIAA0141Q14154 515 aaPredicted RBP10.28□□□□□ -0.76
GTF3A-209ENST00000640289 NMSQ5H8A3 153 aa10.28□□□□□ -0.76
GTF3A-209ENST00000640289 ZNF429Q86V71 674 aa10.28□□□□□ -0.76
GTF3A-209ENST00000640289 NDUFA11Q86Y39 141 aa10.28□□□□□ -0.76
GTF3A-209ENST00000640289 MYOZ3Q8TDC0 251 aa10.28□□□□□ -0.76
GTF3A-209ENST00000640289 FKBP11Q9NYL4 201 aa10.28□□□□□ -0.76
GTF3A-209ENST00000640289 NPIPB5A8MRT5 1133 aa10.27□□□□□ -0.77
GTF3A-209ENST00000640289 ADAP1O75689 374 aa10.27□□□□□ -0.77
GTF3A-209ENST00000640289 DUS4LO95620 317 aaKnown RBP10.27□□□□□ -0.77
GTF3A-209ENST00000640289 TRGV3P03979 118 aa10.27□□□□□ -0.77
GTF3A-209ENST00000640289 HOXB5P09067 269 aa10.27□□□□□ -0.77
GTF3A-209ENST00000640289 CTRB1P17538 263 aa10.27□□□□□ -0.77
GTF3A-209ENST00000640289 PSMB6P28072 239 aa10.27□□□□□ -0.77
GTF3A-209ENST00000640289 TPPP2P59282 170 aa10.27□□□□□ -0.77
GTF3A-209ENST00000640289 HSPE1P61604 102 aaKnown RBP10.27□□□□□ -0.77
GTF3A-209ENST00000640289 CTRB2Q6GPI1 263 aa10.27□□□□□ -0.77
GTF3A-209ENST00000640289 ZNF491Q8N8L2 437 aa10.27□□□□□ -0.77
GTF3A-209ENST00000640289 GNB4Q9HAV0 340 aa10.27□□□□□ -0.77
GTF3A-209ENST00000640289 ZFP57Q9NU63 452 aa10.27□□□□□ -0.77
GTF3A-209ENST00000640289 ZNF257Q9Y2Q1 563 aa10.27□□□□□ -0.77
GTF3A-209ENST00000640289 DUXBA0A1W2PPF3 345 aa10.26□□□□□ -0.77
GTF3A-209ENST00000640289 NUDT19A8MXV4 375 aa10.26□□□□□ -0.77
GTF3A-209ENST00000640289 H3BUA1 57 aa10.26□□□□□ -0.77
GTF3A-209ENST00000640289 TSPAN15O95858 294 aa10.26□□□□□ -0.77
GTF3A-209ENST00000640289 IFNA17P01571 189 aa10.26□□□□□ -0.77
GTF3A-209ENST00000640289 CRYGCP07315 174 aa10.26□□□□□ -0.77
GTF3A-209ENST00000640289 SULT1A3P0DMM9 295 aa10.26□□□□□ -0.77
GTF3A-209ENST00000640289 SULT1A4P0DMN0 295 aa10.26□□□□□ -0.77
GTF3A-209ENST00000640289 OR13C7P0DN81 318 aa10.26□□□□□ -0.77
GTF3A-209ENST00000640289 PRCDQ00LT1 54 aa10.26□□□□□ -0.77
GTF3A-209ENST00000640289 GGNBP1Q5YKI7 109 aa10.26□□□□□ -0.77
GTF3A-209ENST00000640289 THOC7Q6I9Y2 204 aaKnown RBP10.26□□□□□ -0.77
GTF3A-209ENST00000640289 PLET1Q6UQ28 207 aa10.26□□□□□ -0.77
GTF3A-209ENST00000640289 C8orf86Q6ZUL3 223 aa10.26□□□□□ -0.77
GTF3A-209ENST00000640289 KLHL30-AS1Q8NEE0 82 aa10.26□□□□□ -0.77
GTF3A-209ENST00000640289 COQ8AQ8NI60 647 aa10.26□□□□□ -0.77
GTF3A-209ENST00000640289 OR5B12Q96R08 314 aa10.26□□□□□ -0.77
GTF3A-209ENST00000640289 SLA2Q9H6Q3 261 aa10.26□□□□□ -0.77
GTF3A-209ENST00000640289 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.26□□□□□ -0.77
GTF3A-209ENST00000640289 TENM1Q9UKZ4 2725 aa10.26□□□□□ -0.77
GTF3A-209ENST00000640289 MPTX1A8MV57 137 aa10.25□□□□□ -0.77
GTF3A-209ENST00000640289 INMT-MINDY4F8WBC2 141 aa10.25□□□□□ -0.77
GTF3A-209ENST00000640289 M0QZ24 198 aa10.25□□□□□ -0.77
GTF3A-209ENST00000640289 IGHV3-11P01762 117 aa10.25□□□□□ -0.77
GTF3A-209ENST00000640289 CDX1P47902 265 aaPredicted RBP10.25□□□□□ -0.77
GTF3A-209ENST00000640289 SMCO1Q147U7 214 aa10.25□□□□□ -0.77
GTF3A-209ENST00000640289 C2orf68Q2NKX9 166 aa10.25□□□□□ -0.77
GTF3A-209ENST00000640289 DEFB136Q30KP8 78 aa10.25□□□□□ -0.77
GTF3A-209ENST00000640289 AARDQ4LEZ3 155 aa10.25□□□□□ -0.77
GTF3A-209ENST00000640289 ZNF431Q8TF32 576 aaPredicted RBP10.25□□□□□ -0.77
GTF3A-209ENST00000640289 MITD1Q8WV92 249 aa10.25□□□□□ -0.77
GTF3A-209ENST00000640289 UBE2E2Q96LR5 201 aa10.25□□□□□ -0.77
GTF3A-209ENST00000640289 FANCD2OSQ96PS1 177 aa10.25□□□□□ -0.77
GTF3A-209ENST00000640289 DUX3Q96PT4 197 aa10.25□□□□□ -0.77
GTF3A-209ENST00000640289 SRSF8Q9BRL6 282 aaKnown RBP10.25□□□□□ -0.77
GTF3A-209ENST00000640289 PDCD10Q9BUL8 212 aa10.25□□□□□ -0.77
GTF3A-209ENST00000640289 PALMDQ9NP74 551 aa10.25□□□□□ -0.77
GTF3A-209ENST00000640289 TMED3Q9Y3Q3 217 aa10.25□□□□□ -0.77
GTF3A-209ENST00000640289 DMRT1Q9Y5R6 373 aa10.25□□□□□ -0.77
GTF3A-209ENST00000640289 TNCP24821 2201 aa10.25□□□□□ -0.77
GTF3A-209ENST00000640289 TRBV9A0A0B4J1U6 114 aa10.24□□□□□ -0.77
GTF3A-209ENST00000640289 A0A1B0GU03 582 aa10.24□□□□□ -0.77
GTF3A-209ENST00000640289 OR2J3O76001 311 aa10.24□□□□□ -0.77
GTF3A-209ENST00000640289 BRI3O95415 125 aa10.24□□□□□ -0.77
GTF3A-209ENST00000640289 IL5P05113 134 aa10.24□□□□□ -0.77
GTF3A-209ENST00000640289 DEFA4P12838 97 aa10.24□□□□□ -0.77
GTF3A-209ENST00000640289 HOXA1P49639 335 aaPredicted RBP10.24□□□□□ -0.77
GTF3A-209ENST00000640289 RHOGP84095 191 aa10.24□□□□□ -0.77
GTF3A-209ENST00000640289 DCTN2Q13561 401 aaKnown RBP10.24□□□□□ -0.77
GTF3A-209ENST00000640289 C11orf87Q6NUJ2 197 aa10.24□□□□□ -0.77
GTF3A-209ENST00000640289 HSD17B13Q7Z5P4 300 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms