RNA–Protein interactions for RNA: ENST00000620529.1

PCGF3-213, Transcript of polycomb group ring finger 3, humanhuman

BASIC

Gene PCGF3, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-213ENST00000620529 TMEM249Q2WGJ8 235 aa13.27□□□□□ -0.28
PCGF3-213ENST00000620529 SLC24A4Q8NFF2 622 aa13.27□□□□□ -0.28
PCGF3-213ENST00000620529 NDUFA4L2Q9NRX3 87 aa13.27□□□□□ -0.28
PCGF3-213ENST00000620529 CSMD2Q7Z408 3487 aa13.27□□□□□ -0.29
PCGF3-213ENST00000620529 IGHV4-31P0DP07 118 aa13.27□□□□□ -0.29
PCGF3-213ENST00000620529 TMEM11P17152 192 aa13.27□□□□□ -0.29
PCGF3-213ENST00000620529 NPY1RP25929 384 aa13.27□□□□□ -0.29
PCGF3-213ENST00000620529 ERHP84090 104 aaKnown RBP13.27□□□□□ -0.29
PCGF3-213ENST00000620529 PJVKQ0ZLH3 352 aa13.27□□□□□ -0.29
PCGF3-213ENST00000620529 KRTAP1-3Q8IUG1 177 aa13.27□□□□□ -0.29
PCGF3-213ENST00000620529 MRPL41Q8IXM3 137 aaKnown RBP13.27□□□□□ -0.29
PCGF3-213ENST00000620529 HSD17B11Q8NBQ5 300 aa13.27□□□□□ -0.29
PCGF3-213ENST00000620529 TMED6Q8WW62 240 aa13.27□□□□□ -0.29
PCGF3-213ENST00000620529 AJUBAQ96IF1 538 aa13.27□□□□□ -0.29
PCGF3-213ENST00000620529 VPS13CQ709C8 3753 aa13.26□□□□□ -0.29
PCGF3-213ENST00000620529 FBXO24O75426 580 aa13.26□□□□□ -0.29
PCGF3-213ENST00000620529 NDUFA3O95167 84 aa13.26□□□□□ -0.29
PCGF3-213ENST00000620529 GNB1P62873 340 aa13.26□□□□□ -0.29
PCGF3-213ENST00000620529 ARL16Q0P5N6 197 aa13.26□□□□□ -0.29
PCGF3-213ENST00000620529 EBI3Q14213 229 aa13.26□□□□□ -0.29
PCGF3-213ENST00000620529 ATP6V1FQ16864 119 aa13.26□□□□□ -0.29
PCGF3-213ENST00000620529 BRD3OSQ6XYD6 125 aa13.26□□□□□ -0.29
PCGF3-213ENST00000620529 HAPLN4Q86UW8 402 aa13.26□□□□□ -0.29
PCGF3-213ENST00000620529 THNSL2Q86YJ6 484 aa13.26□□□□□ -0.29
PCGF3-213ENST00000620529 NPBQ8NG41 125 aa13.26□□□□□ -0.29
PCGF3-213ENST00000620529 GINS3Q9BRX5 216 aa13.26□□□□□ -0.29
PCGF3-213ENST00000620529 GCN1Q92616 2671 aaKnown RBP13.26□□□□□ -0.29
PCGF3-213ENST00000620529 PLXNB1O43157 2135 aa13.26□□□□□ -0.29
PCGF3-213ENST00000620529 IFNA4P05014 189 aa13.25□□□□□ -0.29
PCGF3-213ENST00000620529 IGHV4-38-2P0DP08 117 aa13.25□□□□□ -0.29
PCGF3-213ENST00000620529 SNCAP37840 140 aa13.25□□□□□ -0.29
PCGF3-213ENST00000620529 RPL27AP46776 148 aaKnown RBP13.25□□□□□ -0.29
PCGF3-213ENST00000620529 FAM74A1Q5RGS3 127 aa13.25□□□□□ -0.29
PCGF3-213ENST00000620529 C10orf55Q5SWW7 151 aa13.25□□□□□ -0.29
PCGF3-213ENST00000620529 ETV3LQ6ZN32 361 aa13.25□□□□□ -0.29
PCGF3-213ENST00000620529 ARV1Q9H2C2 271 aa13.25□□□□□ -0.29
PCGF3-213ENST00000620529 SLC25A32Q9H2D1 315 aa13.25□□□□□ -0.29
PCGF3-213ENST00000620529 FAM96BQ9Y3D0 163 aa13.25□□□□□ -0.29
PCGF3-213ENST00000620529 NCBP2LA6PVI3 153 aaKnown RBP13.25□□□□□ -0.29
PCGF3-213ENST00000620529 PMS2P5A8MQ11 134 aa13.25□□□□□ -0.29
PCGF3-213ENST00000620529 MRGPRG-AS1Q2M3A8 158 aa13.25□□□□□ -0.29
PCGF3-213ENST00000620529 CLLU1Q5K131 121 aa13.25□□□□□ -0.29
PCGF3-213ENST00000620529 SCGB1C1Q8TD33 95 aa13.25□□□□□ -0.29
PCGF3-213ENST00000620529 COMPP49747 757 aaPredicted RBP13.24□□□□□ -0.29
PCGF3-213ENST00000620529 ATP5IP56385 69 aaPredicted RBP13.24□□□□□ -0.29
PCGF3-213ENST00000620529 OR10W1Q8NGF6 305 aa13.24□□□□□ -0.29
PCGF3-213ENST00000620529 TMEM147Q9BVK8 224 aa13.24□□□□□ -0.29
PCGF3-213ENST00000620529 C1RLQ9NZP8 487 aa13.24□□□□□ -0.29
PCGF3-213ENST00000620529 INS-IGF2F8WCM5 200 aa13.23□□□□□ -0.29
PCGF3-213ENST00000620529 CA2P00918 260 aa13.23□□□□□ -0.29
PCGF3-213ENST00000620529 SEC11BP0C7V7 166 aa13.23□□□□□ -0.29
PCGF3-213ENST00000620529 C5orf64Q2M2E5 130 aa13.23□□□□□ -0.29
PCGF3-213ENST00000620529 Q8N6K4 173 aa13.23□□□□□ -0.29
PCGF3-213ENST00000620529 LRRC20Q8TCA0 184 aa13.23□□□□□ -0.29
PCGF3-213ENST00000620529 RNF141Q8WVD5 230 aa13.23□□□□□ -0.29
PCGF3-213ENST00000620529 PCNPQ8WW12 178 aaKnown RBP13.23□□□□□ -0.29
PCGF3-213ENST00000620529 GNPNAT1Q96EK6 184 aaPredicted RBP13.23□□□□□ -0.29
PCGF3-213ENST00000620529 UQCC1Q9NVA1 299 aa13.23□□□□□ -0.29
PCGF3-213ENST00000620529 UBE2L5PA0A1B0GUS4 154 aa13.23□□□□□ -0.29
PCGF3-213ENST00000620529 E7EUB6 86 aa13.23□□□□□ -0.29
PCGF3-213ENST00000620529 ATP6V1G1O75348 118 aa13.23□□□□□ -0.29
PCGF3-213ENST00000620529 CNIH1O95406 144 aa13.23□□□□□ -0.29
PCGF3-213ENST00000620529 SPP1P10451 314 aa13.23□□□□□ -0.29
PCGF3-213ENST00000620529 FAM120AOSQ5T036 256 aa13.23□□□□□ -0.29
PCGF3-213ENST00000620529 WFDC11Q8NEX6 87 aa13.23□□□□□ -0.29
PCGF3-213ENST00000620529 MAP1AP78559 2803 aaPredicted RBP13.22□□□□□ -0.29
PCGF3-213ENST00000620529 A0A0U1RQK1 487 aa13.22□□□□□ -0.29
PCGF3-213ENST00000620529 RPS10-NUDT3A0A1W2PQS6 291 aa13.22□□□□□ -0.29
PCGF3-213ENST00000620529 CGB1A6NKQ9 187 aa13.22□□□□□ -0.29
PCGF3-213ENST00000620529 AVPP01185 164 aa13.22□□□□□ -0.29
PCGF3-213ENST00000620529 FBP1P09467 338 aa13.22□□□□□ -0.29
PCGF3-213ENST00000620529 ATP6V0CP27449 155 aa13.22□□□□□ -0.29
PCGF3-213ENST00000620529 SUB1P53999 127 aaKnown RBP eCLIP13.22□□□□□ -0.29
PCGF3-213ENST00000620529 C2orf83Q53S99 150 aa13.22□□□□□ -0.29
PCGF3-213ENST00000620529 CYB5R2Q6BCY4 276 aa13.22□□□□□ -0.29
PCGF3-213ENST00000620529 FOXC2Q99958 501 aa13.22□□□□□ -0.29
PCGF3-213ENST00000620529 MEGF9Q9H1U4 602 aa13.22□□□□□ -0.29
PCGF3-213ENST00000620529 PRRC2AP48634 2157 aaKnown RBP13.22□□□□□ -0.29
PCGF3-213ENST00000620529 OR13C7P0DN81 318 aa13.21□□□□□ -0.29
PCGF3-213ENST00000620529 LRRC75BQ2VPJ9 315 aa13.21□□□□□ -0.29
PCGF3-213ENST00000620529 FBLN7Q53RD9 439 aa13.21□□□□□ -0.29
PCGF3-213ENST00000620529 KLF17Q5JT82 389 aaPredicted RBP13.21□□□□□ -0.29
PCGF3-213ENST00000620529 SRSF12Q8WXF0 261 aaKnown RBP13.21□□□□□ -0.29
PCGF3-213ENST00000620529 PARD6GQ9BYG4 376 aaPredicted RBP13.21□□□□□ -0.29
PCGF3-213ENST00000620529 SH3BGRL3Q9H299 93 aa13.21□□□□□ -0.29
PCGF3-213ENST00000620529 FCN1O00602 326 aa13.21□□□□□ -0.3
PCGF3-213ENST00000620529 NMBP08949 121 aa13.21□□□□□ -0.3
PCGF3-213ENST00000620529 RNASE2P10153 161 aaKnown RBP13.21□□□□□ -0.3
PCGF3-213ENST00000620529 BPIFB3P59826 476 aa13.21□□□□□ -0.3
PCGF3-213ENST00000620529 DLK1P80370 383 aa13.21□□□□□ -0.3
PCGF3-213ENST00000620529 WT1-ASQ06250 92 aa13.21□□□□□ -0.3
PCGF3-213ENST00000620529 HSD17B13Q7Z5P4 300 aaPredicted RBP13.21□□□□□ -0.3
PCGF3-213ENST00000620529 OR2G3Q8NGZ4 309 aa13.21□□□□□ -0.3
PCGF3-213ENST00000620529 TMEM170AQ8WVE7 144 aa13.21□□□□□ -0.3
PCGF3-213ENST00000620529 GGACTQ9BVM4 153 aa13.21□□□□□ -0.3
PCGF3-213ENST00000620529 WDR61Q9GZS3 305 aaKnown RBP13.21□□□□□ -0.3
PCGF3-213ENST00000620529 NBPF19A0A087WUL8 3843 aa13.2□□□□□ -0.3
PCGF3-213ENST00000620529 SMCO3A2RU48 225 aa13.2□□□□□ -0.3
PCGF3-213ENST00000620529 SULT1A2P50226 295 aa13.2□□□□□ -0.3
PCGF3-213ENST00000620529 RUNX1Q01196 453 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms