RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 TMEM106BQ9NUM4 274 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 CDIPTO14735 213 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 IGKV1D-33P01593 117 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 IGKV1-33P01594 117 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 PMCHP20382 165 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 IER3P46695 156 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 GPR12P47775 334 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 HNRNPA3P51991 378 aaKnown RBP5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 IGFBP7Q16270 282 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 TIGITQ495A1 244 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 JMJD8Q96S16 334 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 MIEN1Q9BRT3 115 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 MRPL18Q9H0U6 180 aaKnown RBP5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 HSPB7Q9UBY9 170 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 PRR14LQ5THK1 2151 aa5.83□□□□□ -1.48
SRGAP3-213ENST00000618999 TRGV8A0A0C4DH27 118 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 RHBDL1O75783 438 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 IGKV1-39P01597 117 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 IGKV1D-39P04432 117 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 CBLN1P23435 193 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 PDLIM4P50479 330 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 KLHDC1Q8N7A1 406 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 STARD4Q96DR4 205 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 PPP1R14DQ9NXH3 145 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 PSG11Q9UQ72 335 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 ZFHX4Q86UP3 3567 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 KIAA1549Q9HCM3 1950 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 MBD3L4A6NDZ8 208 aaPredicted RBP5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 MBD3L3A6NE82 208 aaPredicted RBP5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 MBD3L5A6NJ08 208 aaPredicted RBP5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 RAB29O14966 203 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 MPDU1O75352 247 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 SCGB2A1O75556 95 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 CLDN14O95500 239 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 HAND1O96004 215 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 ADMP35318 185 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 GABRA6Q16445 453 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 HLA-DRB5Q30154 266 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 ZNF585BQ52M93 769 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 TCF23Q7RTU1 214 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 Q8NA96 180 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 OR4B1Q8NGF8 309 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 MBD3L2Q8NHZ7 208 aaPredicted RBP5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 MRGPRDQ8TDS7 321 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 POM121L2Q96KW2 1035 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 QTRT1Q9BXR0 403 aaKnown RBP5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 FAM215AQ9Y5M1 114 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 PXMP4Q9Y6I8 212 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 OOEPA6NGQ2 149 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 DIRC3C9JPN6 131 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 DLEU1O43261 78 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 SPINK4O60575 86 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 NTF3P20783 257 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 RHOBP62745 196 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 FOXL1Q12952 345 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 EDDM3AQ14507 147 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 COLCA1Q6ZS62 124 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 SEM1Q6ZVN7 128 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 DOLPP1Q86YN1 238 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 OR1L1Q8NH94 360 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 RFESDQ8TAC1 157 aa5.82□□□□□ -1.48
SRGAP3-213ENST00000618999 NPIPB11E5RHQ5 1161 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 FCGR3BO75015 233 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 TNFSF13O75888 250 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 ARL14EPLP0DKL9 152 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 MGST1P10620 155 aaKnown RBP5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 DEFA4P12838 97 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 BRS3P32247 399 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 GNB1P62873 340 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 BHLHA15Q7RTS1 189 aaPredicted RBP5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 TCTEX1D1Q8N7M0 179 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 OR52L2PQ8NGH6 319 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 HSD17B10Q99714 261 aaKnown RBP5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 WIPI2Q9Y4P8 454 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 IGHV3-43A0A0B4J1X8 118 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 C20orf202A1L168 122 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 TMEM210A6NLX4 147 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 DEFB108AA8MXU0 73 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 RAMP3O60896 148 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 SERF1AO75920 110 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 IGHV3-43DP0DP04 118 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 GNG4P50150 75 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 Q6ZN92 141 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 SSMEM1Q8WWF3 244 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 TMEM208Q9BTX3 173 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 ZNF331Q9NQX6 463 aaPredicted RBP5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 SLC35D1Q9NTN3 355 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 ICE1Q9Y2F5 2266 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 A6NNC1 897 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 TCF21O43680 179 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 ZNF253O75346 499 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 HBZP02008 142 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 SELEP16581 610 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 KLRB1Q12918 225 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 ZNF497Q6ZNH5 498 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 MRPL52Q86TS9 123 aaKnown RBP5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 C11orf42Q8N5U0 333 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 CORO2AQ92828 525 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 OR2J1Q9GZK6 312 aa5.81□□□□□ -1.48
SRGAP3-213ENST00000618999 RPH3ALQ9UNE2 315 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms