RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 BSXQ3C1V8 233 aa16.12■□□□□ 0.17
SMARCD2-212ENST00000613943 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.12■□□□□ 0.17
SMARCD2-212ENST00000613943 C1orf87Q8N0U7 546 aa16.12■□□□□ 0.17
SMARCD2-212ENST00000613943 HIST1H2BHQ93079 126 aa16.12■□□□□ 0.17
SMARCD2-212ENST00000613943 RNASE6Q93091 150 aaKnown RBP16.12■□□□□ 0.17
SMARCD2-212ENST00000613943 HIST1H2BNQ99877 126 aa16.12■□□□□ 0.17
SMARCD2-212ENST00000613943 HIST1H2BMQ99879 126 aa16.12■□□□□ 0.17
SMARCD2-212ENST00000613943 DYNLRB1Q9NP97 96 aa16.12■□□□□ 0.17
SMARCD2-212ENST00000613943 DOK5Q9P104 306 aa16.12■□□□□ 0.17
SMARCD2-212ENST00000613943 TMEM250H0YL14 139 aa16.12■□□□□ 0.17
SMARCD2-212ENST00000613943 IL6RP08887 468 aaPredicted RBP16.12■□□□□ 0.17
SMARCD2-212ENST00000613943 B2MP61769 119 aa16.12■□□□□ 0.17
SMARCD2-212ENST00000613943 PDZD11Q5EBL8 140 aa16.12■□□□□ 0.17
SMARCD2-212ENST00000613943 LSM4Q9Y4Z0 139 aaKnown RBP16.12■□□□□ 0.17
SMARCD2-212ENST00000613943 LYNX1G3V0Z9 82 aa16.11■□□□□ 0.17
SMARCD2-212ENST00000613943 LYNX1P0DP58 116 aa16.11■□□□□ 0.17
SMARCD2-212ENST00000613943 GRNP28799 593 aaKnown RBP16.11■□□□□ 0.17
SMARCD2-212ENST00000613943 CHRNB4P30926 498 aa16.11■□□□□ 0.17
SMARCD2-212ENST00000613943 RND2P52198 227 aa16.11■□□□□ 0.17
SMARCD2-212ENST00000613943 RTL8BQ17RB0 113 aa16.11■□□□□ 0.17
SMARCD2-212ENST00000613943 GFI1BQ5VTD9 330 aa16.11■□□□□ 0.17
SMARCD2-212ENST00000613943 STPG3Q8N7X2 389 aa16.11■□□□□ 0.17
SMARCD2-212ENST00000613943 NEIL1Q96FI4 390 aaPredicted RBP16.11■□□□□ 0.17
SMARCD2-212ENST00000613943 ADTRPQ96IZ2 230 aa16.11■□□□□ 0.17
SMARCD2-212ENST00000613943 NPVFQ9HCQ7 196 aa16.11■□□□□ 0.17
SMARCD2-212ENST00000613943 E7EUB6 86 aa16.11■□□□□ 0.17
SMARCD2-212ENST00000613943 DVL1O14640 695 aa16.11■□□□□ 0.17
SMARCD2-212ENST00000613943 GATA2P23769 480 aaPredicted RBP16.11■□□□□ 0.17
SMARCD2-212ENST00000613943 TMPRSS3P57727 454 aa16.11■□□□□ 0.17
SMARCD2-212ENST00000613943 GNB1P62873 340 aa16.11■□□□□ 0.17
SMARCD2-212ENST00000613943 LINC01560Q8TB33 94 aa16.11■□□□□ 0.17
SMARCD2-212ENST00000613943 GAL3ST2Q9H3Q3 398 aa16.11■□□□□ 0.17
SMARCD2-212ENST00000613943 PLEKHA3Q9HB20 300 aa16.11■□□□□ 0.17
SMARCD2-212ENST00000613943 ABCA4P78363 2273 aa16.1■□□□□ 0.17
SMARCD2-212ENST00000613943 IFITM10A6NMD0 228 aa16.1■□□□□ 0.17
SMARCD2-212ENST00000613943 UPK2O00526 184 aa16.1■□□□□ 0.17
SMARCD2-212ENST00000613943 FOXH1O75593 365 aa16.1■□□□□ 0.17
SMARCD2-212ENST00000613943 FRZBQ92765 325 aa16.1■□□□□ 0.17
SMARCD2-212ENST00000613943 HARBI1Q96MB7 349 aa16.1■□□□□ 0.17
SMARCD2-212ENST00000613943 TEX50A0A1B0GTY4 177 aa16.1■□□□□ 0.17
SMARCD2-212ENST00000613943 ACTL6BO94805 426 aa16.1■□□□□ 0.17
SMARCD2-212ENST00000613943 NDUFB4O95168 129 aa16.1■□□□□ 0.17
SMARCD2-212ENST00000613943 TEPPQ6URK8 271 aa16.1■□□□□ 0.17
SMARCD2-212ENST00000613943 GGACTQ9BVM4 153 aa16.1■□□□□ 0.17
SMARCD2-212ENST00000613943 MPDU1O75352 247 aa16.09■□□□□ 0.17
SMARCD2-212ENST00000613943 ZNF833PQ6ZTB9 187 aa16.09■□□□□ 0.17
SMARCD2-212ENST00000613943 TMEM242Q9NWH2 141 aa16.09■□□□□ 0.17
SMARCD2-212ENST00000613943 OR10X1Q8NGY0 326 aa16.08■□□□□ 0.17
SMARCD2-212ENST00000613943 IGKV1OR2-108A0A075B7D4 117 aa16.08■□□□□ 0.16
SMARCD2-212ENST00000613943 FAM90A27PA6NNH2 459 aa16.08■□□□□ 0.16
SMARCD2-212ENST00000613943 H0YJW9 148 aa16.08■□□□□ 0.16
SMARCD2-212ENST00000613943 NDUFB3O43676 98 aa16.08■□□□□ 0.16
SMARCD2-212ENST00000613943 TRGC1P0CF51 173 aa16.08■□□□□ 0.16
SMARCD2-212ENST00000613943 HNF1AP20823 631 aa16.08■□□□□ 0.16
SMARCD2-212ENST00000613943 PRCDQ00LT1 54 aa16.08■□□□□ 0.16
SMARCD2-212ENST00000613943 EFNB3Q15768 340 aa16.08■□□□□ 0.16
SMARCD2-212ENST00000613943 POU2AF1Q16633 256 aa16.08■□□□□ 0.16
SMARCD2-212ENST00000613943 C10orf55Q5SWW7 151 aa16.08■□□□□ 0.16
SMARCD2-212ENST00000613943 ZNF114Q8NC26 417 aa16.08■□□□□ 0.16
SMARCD2-212ENST00000613943 PRNDQ9UKY0 176 aa16.08■□□□□ 0.16
SMARCD2-212ENST00000613943 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.07■□□□□ 0.16
SMARCD2-212ENST00000613943 STAG3L2P0CL84 134 aa16.07■□□□□ 0.16
SMARCD2-212ENST00000613943 STAG3L3P0CL85 134 aa16.07■□□□□ 0.16
SMARCD2-212ENST00000613943 CHRNA7P36544 502 aa16.07■□□□□ 0.16
SMARCD2-212ENST00000613943 LY86O95711 162 aa16.07■□□□□ 0.16
SMARCD2-212ENST00000613943 LOXP28300 417 aaPredicted RBP16.07■□□□□ 0.16
SMARCD2-212ENST00000613943 LRRC10Q5BKY1 277 aa16.07■□□□□ 0.16
SMARCD2-212ENST00000613943 RAB1CQ92928 201 aa16.07■□□□□ 0.16
SMARCD2-212ENST00000613943 YTHDF2Q9Y5A9 579 aaKnown RBP16.07■□□□□ 0.16
SMARCD2-212ENST00000613943 PLXNB1O43157 2135 aa16.07■□□□□ 0.16
SMARCD2-212ENST00000613943 IGHV3-72A0A0B4J1Y9 119 aa16.06■□□□□ 0.16
SMARCD2-212ENST00000613943 H7BYZ3 331 aa16.06■□□□□ 0.16
SMARCD2-212ENST00000613943 IGHV3-48P01763 117 aa16.06■□□□□ 0.16
SMARCD2-212ENST00000613943 GALR1P47211 349 aa16.06■□□□□ 0.16
SMARCD2-212ENST00000613943 MEF2CQ06413 473 aaPredicted RBP16.06■□□□□ 0.16
SMARCD2-212ENST00000613943 RITA1Q96K30 269 aa16.06■□□□□ 0.16
SMARCD2-212ENST00000613943 NAV3Q8IVL0 2385 aa16.06■□□□□ 0.16
SMARCD2-212ENST00000613943 SCO2A0A1W2PP80 73 aa16.06■□□□□ 0.16
SMARCD2-212ENST00000613943 TNFRSF13BO14836 293 aaPredicted RBP16.06■□□□□ 0.16
SMARCD2-212ENST00000613943 ANKHD1Q8IWZ3 2542 aaKnown RBP16.05■□□□□ 0.16
SMARCD2-212ENST00000613943 A0A1W2PPQ1 181 aa16.05■□□□□ 0.16
SMARCD2-212ENST00000613943 S100A8P05109 93 aa16.05■□□□□ 0.16
SMARCD2-212ENST00000613943 S100A9P06702 114 aaKnown RBP16.05■□□□□ 0.16
SMARCD2-212ENST00000613943 PFN1P07737 140 aaKnown RBP16.05■□□□□ 0.16
SMARCD2-212ENST00000613943 C1QTNF9P0C862 333 aa16.05■□□□□ 0.16
SMARCD2-212ENST00000613943 HOXA5P20719 270 aa16.05■□□□□ 0.16
SMARCD2-212ENST00000613943 MIR17HGQ75NE6 70 aa16.05■□□□□ 0.16
SMARCD2-212ENST00000613943 COL25A1Q9BXS0 654 aaPredicted RBP16.05■□□□□ 0.16
SMARCD2-212ENST00000613943 CTDSP1Q9GZU7 261 aa16.05■□□□□ 0.16
SMARCD2-212ENST00000613943 NIT2Q9NQR4 276 aa16.05■□□□□ 0.16
SMARCD2-212ENST00000613943 SPTBN4Q9H254 2564 aa16.05■□□□□ 0.16
SMARCD2-212ENST00000613943 TRBV20OR9-2A0A075B6H5 130 aa16.05■□□□□ 0.16
SMARCD2-212ENST00000613943 APOA2P02652 100 aa16.05■□□□□ 0.16
SMARCD2-212ENST00000613943 SOD3P08294 240 aa16.05■□□□□ 0.16
SMARCD2-212ENST00000613943 CDSNQ15517 529 aa16.05■□□□□ 0.16
SMARCD2-212ENST00000613943 OR4P4Q8NGL7 312 aa16.05■□□□□ 0.16
SMARCD2-212ENST00000613943 PCGF1Q9BSM1 259 aa16.05■□□□□ 0.16
SMARCD2-212ENST00000613943 TPSG1Q9NRR2 321 aa16.05■□□□□ 0.16
SMARCD2-212ENST00000613943 FAM78BQ5VT40 261 aa16.04■□□□□ 0.16
SMARCD2-212ENST00000613943 LINC01551Q86U37 167 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms