RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 UNQ5815/PRO19632Q6UWF5 114 aa11.58□□□□□ -0.56
CD48-203ENST00000613788 STPG2Q8N412 459 aa11.58□□□□□ -0.56
CD48-203ENST00000613788 LFNGQ8NES3 379 aa11.58□□□□□ -0.56
CD48-203ENST00000613788 OR4D5Q8NGN0 318 aa11.58□□□□□ -0.56
CD48-203ENST00000613788 TAF15Q92804 592 aaKnown RBP eCLIP11.58□□□□□ -0.56
CD48-203ENST00000613788 SERTAD4Q9NUC0 356 aa11.58□□□□□ -0.56
CD48-203ENST00000613788 FBXO7Q9Y3I1 522 aa11.58□□□□□ -0.56
CD48-203ENST00000613788 A0A1B0GUS0 222 aa11.57□□□□□ -0.56
CD48-203ENST00000613788 CGB1A6NKQ9 187 aa11.57□□□□□ -0.56
CD48-203ENST00000613788 CEBPZOSA8MTT3 80 aa11.57□□□□□ -0.56
CD48-203ENST00000613788 TEX22C9J3V5 150 aa11.57□□□□□ -0.56
CD48-203ENST00000613788 NXPH3O95157 252 aa11.57□□□□□ -0.56
CD48-203ENST00000613788 H2BFSP57053 126 aa11.57□□□□□ -0.56
CD48-203ENST00000613788 ERHP84090 104 aaKnown RBP11.57□□□□□ -0.56
CD48-203ENST00000613788 ECSCRQ19T08 205 aa11.57□□□□□ -0.56
CD48-203ENST00000613788 LINC01006Q8NI28 216 aa11.57□□□□□ -0.56
CD48-203ENST00000613788 NOL4LQ96MY1 436 aaPredicted RBP11.57□□□□□ -0.56
CD48-203ENST00000613788 NMES1Q9C002 83 aa11.57□□□□□ -0.56
CD48-203ENST00000613788 ZFP57Q9NU63 452 aa11.57□□□□□ -0.56
CD48-203ENST00000613788 LINC00527Q9UJ94 153 aa11.57□□□□□ -0.56
CD48-203ENST00000613788 WSB1Q9Y6I7 421 aa11.57□□□□□ -0.56
CD48-203ENST00000613788 A0A1B0GW64 132 aa11.56□□□□□ -0.56
CD48-203ENST00000613788 HMX3A6NHT5 357 aa11.56□□□□□ -0.56
CD48-203ENST00000613788 G3V318 75 aa11.56□□□□□ -0.56
CD48-203ENST00000613788 WRBO00258 174 aa11.56□□□□□ -0.56
CD48-203ENST00000613788 SCGB1D2O95969 90 aa11.56□□□□□ -0.56
CD48-203ENST00000613788 CXCL3P19876 107 aa11.56□□□□□ -0.56
CD48-203ENST00000613788 HOXA1P49639 335 aaPredicted RBP11.56□□□□□ -0.56
CD48-203ENST00000613788 SLC35B1P78383 322 aa11.56□□□□□ -0.56
CD48-203ENST00000613788 TMEM95Q3KNT9 176 aa11.56□□□□□ -0.56
CD48-203ENST00000613788 CENPVQ7Z7K6 275 aaPredicted RBP11.56□□□□□ -0.56
CD48-203ENST00000613788 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.56□□□□□ -0.56
CD48-203ENST00000613788 OR11H7Q8NGC8 314 aa11.56□□□□□ -0.56
CD48-203ENST00000613788 OR10W1Q8NGF6 305 aa11.56□□□□□ -0.56
CD48-203ENST00000613788 HIPK2Q9H2X6 1198 aa11.56□□□□□ -0.56
CD48-203ENST00000613788 RBKSQ9H477 322 aa11.56□□□□□ -0.56
CD48-203ENST00000613788 TNCP24821 2201 aa11.56□□□□□ -0.56
CD48-203ENST00000613788 IGLC7A0M8Q6 106 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 CLPSL1A2RUU4 121 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 INS-IGF2F8WCM5 200 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 SYNGR2O43760 224 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 LY86O95711 162 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 APELAP0DMC3 54 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 OR13C7P0DN81 318 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 FOXL1Q12952 345 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 IL15RAQ13261 267 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 SPINK9Q5DT21 86 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 TTC9CQ8N5M4 171 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 ASB13Q8WXK3 278 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 ZNF436Q9C0F3 470 aaPredicted RBP11.55□□□□□ -0.56
CD48-203ENST00000613788 HEYLQ9NQ87 328 aaPredicted RBP11.55□□□□□ -0.56
CD48-203ENST00000613788 NPIPB5A8MRT5 1133 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 MBPP02686 304 aaPredicted RBP11.55□□□□□ -0.56
CD48-203ENST00000613788 PSMB6P28072 239 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 SNCAP37840 140 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 WT1-ASQ06250 92 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 SRSF4Q08170 494 aaKnown RBP11.55□□□□□ -0.56
CD48-203ENST00000613788 ASPHD1Q5U4P2 390 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 OR5T1Q8NG75 326 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 DTD1Q8TEA8 209 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 CIB3Q96Q77 187 aaPredicted RBP11.55□□□□□ -0.56
CD48-203ENST00000613788 WNT10AQ9GZT5 417 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 MAGT1Q9H0U3 335 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 RNF114Q9Y508 228 aa11.55□□□□□ -0.56
CD48-203ENST00000613788 NF1P21359 2839 aa11.54□□□□□ -0.56
CD48-203ENST00000613788 JMJD1CQ15652 2540 aa11.54□□□□□ -0.56
CD48-203ENST00000613788 hCG_2014768A0A024R1R8 64 aa11.54□□□□□ -0.56
CD48-203ENST00000613788 PSMB11A5LHX3 300 aa11.54□□□□□ -0.56
CD48-203ENST00000613788 PLXNB1O43157 2135 aa11.54□□□□□ -0.56
CD48-203ENST00000613788 CYB5BO43169 146 aa11.54□□□□□ -0.56
CD48-203ENST00000613788 CRYGCP07315 174 aa11.54□□□□□ -0.56
CD48-203ENST00000613788 AREGP15514 252 aa11.54□□□□□ -0.56
CD48-203ENST00000613788 CTRB1P17538 263 aa11.54□□□□□ -0.56
CD48-203ENST00000613788 PPIFP30405 207 aaKnown RBP11.54□□□□□ -0.56
CD48-203ENST00000613788 POLR2GP62487 172 aaKnown RBP eCLIP11.54□□□□□ -0.56
CD48-203ENST00000613788 C19orf54Q5BKX5 351 aa11.54□□□□□ -0.56
CD48-203ENST00000613788 CTRB2Q6GPI1 263 aa11.54□□□□□ -0.56
CD48-203ENST00000613788 OR2C3Q8N628 320 aa11.54□□□□□ -0.56
CD48-203ENST00000613788 FAM110DQ8TAY7 271 aaPredicted RBP11.54□□□□□ -0.56
CD48-203ENST00000613788 TMEM89A2RUT3 159 aa11.53□□□□□ -0.56
CD48-203ENST00000613788 RLN2P04090 185 aa11.53□□□□□ -0.56
CD48-203ENST00000613788 REG1AP05451 166 aa11.53□□□□□ -0.56
CD48-203ENST00000613788 GIPP09681 153 aaPredicted RBP11.53□□□□□ -0.56
CD48-203ENST00000613788 DEFA4P12838 97 aa11.53□□□□□ -0.56
CD48-203ENST00000613788 MDKP21741 143 aaPredicted RBP11.53□□□□□ -0.56
CD48-203ENST00000613788 SUB1P53999 127 aaKnown RBP eCLIP11.53□□□□□ -0.56
CD48-203ENST00000613788 RPP30P78346 268 aaKnown RBP11.53□□□□□ -0.56
CD48-203ENST00000613788 CFHR3Q02985 330 aa11.53□□□□□ -0.56
CD48-203ENST00000613788 KRTAP24-1Q3LI83 254 aa11.53□□□□□ -0.56
CD48-203ENST00000613788 TEX38Q6PEX7 206 aa11.53□□□□□ -0.56
CD48-203ENST00000613788 COMMD1Q8N668 190 aa11.53□□□□□ -0.56
CD48-203ENST00000613788 OR1L6Q8NGR2 347 aa11.53□□□□□ -0.56
CD48-203ENST00000613788 TMEM158Q8WZ71 300 aa11.53□□□□□ -0.56
CD48-203ENST00000613788 RAB40CQ96S21 281 aa11.53□□□□□ -0.56
CD48-203ENST00000613788 LSM5Q9Y4Y9 91 aaKnown RBP11.53□□□□□ -0.56
CD48-203ENST00000613788 U3KQ87 197 aa11.53□□□□□ -0.56
CD48-203ENST00000613788 K7EPK0 472 aa11.52□□□□□ -0.57
CD48-203ENST00000613788 SSSCA1O60232 199 aa11.52□□□□□ -0.57
CD48-203ENST00000613788 FBXO24O75426 580 aa11.52□□□□□ -0.57
CD48-203ENST00000613788 IGHG4P01861 327 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms