RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 KBTBD11-OT1A0A1B0GTJ5 212 aa9.16□□□□□ -0.94
CDC42EP3-206ENST00000611976 GDF9O60383 454 aa9.16□□□□□ -0.94
CDC42EP3-206ENST00000611976 AMBPP02760 352 aa9.16□□□□□ -0.94
CDC42EP3-206ENST00000611976 IGHV1-2P23083 117 aa9.16□□□□□ -0.94
CDC42EP3-206ENST00000611976 ACSF3Q4G176 576 aaPredicted RBP9.16□□□□□ -0.94
CDC42EP3-206ENST00000611976 GFI1BQ5VTD9 330 aa9.16□□□□□ -0.94
CDC42EP3-206ENST00000611976 TMEM70Q9BUB7 260 aa9.16□□□□□ -0.94
CDC42EP3-206ENST00000611976 TMEM106BQ9NUM4 274 aa9.16□□□□□ -0.94
CDC42EP3-206ENST00000611976 COL4A6Q14031 1691 aa9.15□□□□□ -0.94
CDC42EP3-206ENST00000611976 IZUMO1RA6ND01 250 aa9.15□□□□□ -0.94
CDC42EP3-206ENST00000611976 SERF1AO75920 110 aa9.15□□□□□ -0.94
CDC42EP3-206ENST00000611976 TBR1Q16650 682 aa9.15□□□□□ -0.94
CDC42EP3-206ENST00000611976 DMRTA2Q96SC8 542 aa9.15□□□□□ -0.94
CDC42EP3-206ENST00000611976 C15orf61A6NNL5 157 aa9.15□□□□□ -0.94
CDC42EP3-206ENST00000611976 RPS20P60866 119 aaKnown RBP9.15□□□□□ -0.94
CDC42EP3-206ENST00000611976 RPL24P83731 157 aaKnown RBP9.15□□□□□ -0.94
CDC42EP3-206ENST00000611976 MIR17HGQ75NE6 70 aa9.15□□□□□ -0.94
CDC42EP3-206ENST00000611976 TMEM144Q7Z5S9 345 aa9.15□□□□□ -0.94
CDC42EP3-206ENST00000611976 OR10AG1Q8NH19 301 aa9.15□□□□□ -0.94
CDC42EP3-206ENST00000611976 MYOZ3Q8TDC0 251 aa9.15□□□□□ -0.94
CDC42EP3-206ENST00000611976 PEX7O00628 323 aa9.15□□□□□ -0.95
CDC42EP3-206ENST00000611976 LIPFP07098 398 aa9.15□□□□□ -0.95
CDC42EP3-206ENST00000611976 KIR2DL2P43627 348 aaPredicted RBP9.15□□□□□ -0.95
CDC42EP3-206ENST00000611976 ZFP36L1Q07352 338 aaKnown RBP9.15□□□□□ -0.95
CDC42EP3-206ENST00000611976 PYY3Q5JQD4 70 aa9.15□□□□□ -0.95
CDC42EP3-206ENST00000611976 TMEM14EPQ6UXP3 125 aa9.15□□□□□ -0.95
CDC42EP3-206ENST00000611976 LINC00305Q7Z4B0 112 aa9.15□□□□□ -0.95
CDC42EP3-206ENST00000611976 C9JQL5 133 aa9.15□□□□□ -0.95
CDC42EP3-206ENST00000611976 CELA3BP08861 270 aa9.15□□□□□ -0.95
CDC42EP3-206ENST00000611976 TIMM23BQ5SRD1 257 aa9.15□□□□□ -0.95
CDC42EP3-206ENST00000611976 TRIOBPQ9H2D6 2365 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 TRAV30A0A087WSZ9 112 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 IGHV3-72A0A0B4J1Y9 119 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 IGHV2OR16-5A0A0B4J2B6 119 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 LOC389332A0A1B0GUA5 103 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 SPAARA0A1B0GVQ0 90 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 M0QZ24 198 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 TWIST1Q15672 202 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 OR52E5Q8NH55 327 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 OSTCQ9NRP0 149 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 SCGB1C2P0DMR2 95 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 CSRP2Q16527 193 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 Q1RN00 199 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 ATOH7Q8N100 152 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 EAF1Q96JC9 268 aaPredicted RBP9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 CENPFP49454 3210 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 GAGE10A6NGK3 116 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 SS18L1O75177 396 aaPredicted RBP9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 IGKV1-5P01602 117 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 FOXL1Q12952 345 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 TEX38Q6PEX7 206 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 NPIPB11E5RHQ5 1161 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 NMUP48645 174 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 PSG9Q00887 426 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 WDR82Q6UXN9 313 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 TCF23Q7RTU1 214 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 LURAP1LQ8IV03 231 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 OR4A5Q8NH83 315 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 RNASEH2CQ8TDP1 164 aaKnown RBP9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 DCTN5Q9BTE1 182 aa9.14□□□□□ -0.95
CDC42EP3-206ENST00000611976 CSRP1P21291 193 aaKnown RBP9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 HERVK_113P61574 105 aa9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 MORN2Q502X0 79 aa9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 SPSB3Q6PJ21 355 aa9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 RPP25LQ8N5L8 163 aaKnown RBP9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 SRSF12Q8WXF0 261 aaKnown RBP9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 GNB1LQ9BYB4 327 aa9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 MRPL37Q9BZE1 423 aaKnown RBP9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 A0A1W2PRD5 423 aa9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 A0A1W2PRF3 423 aa9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 A0A1W2PRM7 423 aa9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 NTN3O00634 580 aaPredicted RBP9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 DUTP33316 252 aaKnown RBP9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 CKS2P33552 79 aa9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 ATP1A1-AS1Q5TC04 95 aa9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 ZNF788Q6ZQV5 615 aa9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 TMUB1Q9BVT8 246 aa9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 PINLYPA6NC86 204 aa9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 ACTL10Q5JWF8 245 aa9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 RFNGQ9Y644 331 aa9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 ZNF207O43670 478 aaKnown RBP9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 OR10J3Q5JRS4 329 aa9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 FMC1Q96HJ9 113 aa9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 NRN1Q9NPD7 142 aa9.13□□□□□ -0.95
CDC42EP3-206ENST00000611976 CDX4O14627 284 aaPredicted RBP9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 OCC1Q8TAD7 63 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 WNT10AQ9GZT5 417 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 HELZP42694 1942 aaKnown RBP9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 A0A1W2PRE2 83 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 F5H697 171 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 OR9G9P0C7N8 305 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 STAG3L2P0CL84 134 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 STAG3L3P0CL85 134 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 FOXC1Q12948 553 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 ZNF581Q9P0T4 197 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 BRWD1Q9NSI6 2320 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 F2RL2O00254 374 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 UPK2O00526 184 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 REG1AP05451 166 aa9.12□□□□□ -0.95
CDC42EP3-206ENST00000611976 NBEAP1P0C6P0 100 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms