RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 IFNL4K9M1U5 179 aa11.12□□□□□ -0.63
USP6NL-205ENST00000609104 NBEAP1P0C6P0 100 aa11.12□□□□□ -0.63
USP6NL-205ENST00000609104 RNASE4P34096 147 aaKnown RBP11.12□□□□□ -0.63
USP6NL-205ENST00000609104 GPX4P36969 197 aaPredicted RBP11.12□□□□□ -0.63
USP6NL-205ENST00000609104 PAPPA-AS1Q5QFB9 102 aa11.12□□□□□ -0.63
USP6NL-205ENST00000609104 TMEM250H0YL14 139 aa11.12□□□□□ -0.63
USP6NL-205ENST00000609104 TRGV3P03979 118 aa11.12□□□□□ -0.63
USP6NL-205ENST00000609104 NPCDR1Q9BY65 106 aa11.12□□□□□ -0.63
USP6NL-205ENST00000609104 FOXA2Q9Y261 457 aaPredicted RBP11.12□□□□□ -0.63
USP6NL-205ENST00000609104 C19orf67A6NJJ6 358 aa11.12□□□□□ -0.63
USP6NL-205ENST00000609104 KLF4O43474 513 aa11.12□□□□□ -0.63
USP6NL-205ENST00000609104 OR9G1Q8NH87 305 aa11.12□□□□□ -0.63
USP6NL-205ENST00000609104 TRAV24A0A0B4J272 114 aa11.11□□□□□ -0.63
USP6NL-205ENST00000609104 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.11□□□□□ -0.63
USP6NL-205ENST00000609104 GSN-AS1Q9NRJ2 163 aa11.11□□□□□ -0.63
USP6NL-205ENST00000609104 IGFBP2P18065 325 aa11.11□□□□□ -0.63
USP6NL-205ENST00000609104 FGF11Q92914 225 aa11.11□□□□□ -0.63
USP6NL-205ENST00000609104 WDYHV1Q96HA8 205 aa11.11□□□□□ -0.63
USP6NL-205ENST00000609104 IGHV1-69-2A0A0G2JMI3 117 aa11.11□□□□□ -0.63
USP6NL-205ENST00000609104 C5orf67F2Z3F1 127 aa11.11□□□□□ -0.63
USP6NL-205ENST00000609104 CD69Q07108 199 aa11.11□□□□□ -0.63
USP6NL-205ENST00000609104 CD200R1LQ6Q8B3 271 aa11.11□□□□□ -0.63
USP6NL-205ENST00000609104 UCP3P55916 312 aa11.11□□□□□ -0.63
USP6NL-205ENST00000609104 TRBV7-9A0A0J9YWB2 115 aa11.11□□□□□ -0.63
USP6NL-205ENST00000609104 PROB1E7EW31 1015 aa11.11□□□□□ -0.63
USP6NL-205ENST00000609104 IGHV4-39P01824 125 aa11.11□□□□□ -0.63
USP6NL-205ENST00000609104 ZP1P60852 638 aa11.11□□□□□ -0.63
USP6NL-205ENST00000609104 RNF115Q9Y4L5 304 aa11.11□□□□□ -0.63
USP6NL-205ENST00000609104 EFNB1P98172 346 aa11.11□□□□□ -0.63
USP6NL-205ENST00000609104 RALGAPA2Q2PPJ7 1873 aa11.11□□□□□ -0.63
USP6NL-205ENST00000609104 SYNGR3O43761 229 aa11.11□□□□□ -0.63
USP6NL-205ENST00000609104 PF4P02776 101 aa11.11□□□□□ -0.63
USP6NL-205ENST00000609104 TMPRSS3P57727 454 aa11.11□□□□□ -0.63
USP6NL-205ENST00000609104 ATP5LO75964 103 aa11.1□□□□□ -0.63
USP6NL-205ENST00000609104 TEX45Q8NA69 505 aa11.1□□□□□ -0.63
USP6NL-205ENST00000609104 TRAV12-3A0A0B4J271 114 aa11.1□□□□□ -0.63
USP6NL-205ENST00000609104 CTSBP07858 339 aa11.1□□□□□ -0.63
USP6NL-205ENST00000609104 TUBA4BQ9H853 241 aa11.1□□□□□ -0.63
USP6NL-205ENST00000609104 DUX3Q96PT4 197 aa11.1□□□□□ -0.63
USP6NL-205ENST00000609104 NPIPB4C9JG80 1138 aa11.1□□□□□ -0.63
USP6NL-205ENST00000609104 STPG1Q5TH74 334 aa11.1□□□□□ -0.63
USP6NL-205ENST00000609104 RCC1LQ96I51 464 aaKnown RBP11.1□□□□□ -0.63
USP6NL-205ENST00000609104 PQLC2LA1A4F0 135 aa11.1□□□□□ -0.63
USP6NL-205ENST00000609104 INTS1Q8N201 2190 aaKnown RBP11.1□□□□□ -0.63
USP6NL-205ENST00000609104 ZNF729A6NN14 1252 aaPredicted RBP11.1□□□□□ -0.63
USP6NL-205ENST00000609104 IGHMP01871 453 aa11.1□□□□□ -0.63
USP6NL-205ENST00000609104 TCF23Q7RTU1 214 aa11.1□□□□□ -0.63
USP6NL-205ENST00000609104 TMEM54Q969K7 222 aa11.1□□□□□ -0.63
USP6NL-205ENST00000609104 A0A1B0GUT8 65 aa11.1□□□□□ -0.63
USP6NL-205ENST00000609104 MESP2Q0VG99 397 aa11.1□□□□□ -0.63
USP6NL-205ENST00000609104 TTC9CQ8N5M4 171 aa11.1□□□□□ -0.63
USP6NL-205ENST00000609104 ITLN2Q8WWU7 325 aaPredicted RBP11.1□□□□□ -0.63
USP6NL-205ENST00000609104 FNDC4Q9H6D8 234 aaPredicted RBP11.1□□□□□ -0.63
USP6NL-205ENST00000609104 LCTP09848 1927 aa11.1□□□□□ -0.63
USP6NL-205ENST00000609104 SFTA2Q6UW10 78 aa11.09□□□□□ -0.63
USP6NL-205ENST00000609104 SAA1P0DJI8 122 aaPredicted RBP11.09□□□□□ -0.63
USP6NL-205ENST00000609104 ATP5J2P56134 94 aa11.09□□□□□ -0.63
USP6NL-205ENST00000609104 TMEM74BQ9NUR3 256 aa11.09□□□□□ -0.63
USP6NL-205ENST00000609104 TRAV8-2A0A0B4J237 113 aa11.09□□□□□ -0.63
USP6NL-205ENST00000609104 VENTXO95231 258 aa11.09□□□□□ -0.63
USP6NL-205ENST00000609104 GLI3P10071 1580 aa11.09□□□□□ -0.63
USP6NL-205ENST00000609104 FGF5P12034 268 aa11.09□□□□□ -0.63
USP6NL-205ENST00000609104 ASIPP42127 132 aa11.09□□□□□ -0.63
USP6NL-205ENST00000609104 DERL1Q9BUN8 251 aa11.09□□□□□ -0.63
USP6NL-205ENST00000609104 CNTFRP26992 372 aa11.09□□□□□ -0.63
USP6NL-205ENST00000609104 ATP5G3P48201 142 aa11.09□□□□□ -0.63
USP6NL-205ENST00000609104 PSMG3Q9BT73 122 aaPredicted RBP11.09□□□□□ -0.63
USP6NL-205ENST00000609104 SPCS1Q9Y6A9 102 aa11.09□□□□□ -0.63
USP6NL-205ENST00000609104 FMC1Q96HJ9 113 aa11.09□□□□□ -0.63
USP6NL-205ENST00000609104 CD8AP01732 235 aa11.09□□□□□ -0.63
USP6NL-205ENST00000609104 OR5P3Q8WZ94 311 aa11.09□□□□□ -0.63
USP6NL-205ENST00000609104 TDGF1P13385 188 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 HOXA5P20719 270 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 C1QL2Q7Z5L3 287 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 HIGD1CA8MV81 97 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 SLC25A45Q8N413 288 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 NPFFR1Q9GZQ6 430 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 GATAD1Q8WUU5 269 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 Q5PR19 223 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 SFXN3Q9BWM7 321 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 TET1Q8NFU7 2136 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 RNASEH2CQ8TDP1 164 aaKnown RBP11.08□□□□□ -0.64
USP6NL-205ENST00000609104 CLDN16Q9Y5I7 305 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 PDLIM4P50479 330 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 ATP1A1-AS1Q5TC04 95 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 FBXL15Q9H469 300 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 H7C1H1 209 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 CA7P43166 264 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 SPOCK3Q9BQ16 436 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 IGKV1D-33P01593 117 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 IGKV1-33P01594 117 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 FTH1P19P0C7X4 201 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 COX6A1P12074 109 aa11.08□□□□□ -0.64
USP6NL-205ENST00000609104 MYO7BQ6PIF6 2116 aa11.07□□□□□ -0.64
USP6NL-205ENST00000609104 LINC00614P0C842 121 aa11.07□□□□□ -0.64
USP6NL-205ENST00000609104 TMEM14DPA8MWL7 114 aa11.07□□□□□ -0.64
USP6NL-205ENST00000609104 HOXB1P14653 301 aaPredicted RBP11.07□□□□□ -0.64
USP6NL-205ENST00000609104 LEPP41159 167 aa11.07□□□□□ -0.64
USP6NL-205ENST00000609104 IGKV1D-42A0A075B6H8 117 aa11.07□□□□□ -0.64
USP6NL-205ENST00000609104 C4orf51C9J302 202 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms