RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 TMEM59Q9BXS4 323 aa6.5□□□□□ -1.37
CTCFL-220ENST00000608858 KRTAP1-5Q9BYS1 174 aa6.5□□□□□ -1.37
CTCFL-220ENST00000608858 PTTG2Q9NZH5 202 aa6.5□□□□□ -1.37
CTCFL-220ENST00000608858 THYN1Q9P016 225 aa6.5□□□□□ -1.37
CTCFL-220ENST00000608858 KLK9Q9UKQ9 250 aa6.5□□□□□ -1.37
CTCFL-220ENST00000608858 LINC00588Q9Y4M8 146 aa6.5□□□□□ -1.37
CTCFL-220ENST00000608858 TCRBV3S1A0A5B6 114 aa6.49□□□□□ -1.37
CTCFL-220ENST00000608858 KRTAP29-1A8MX34 341 aaPredicted RBP6.49□□□□□ -1.37
CTCFL-220ENST00000608858 FABP7O15540 132 aa6.49□□□□□ -1.37
CTCFL-220ENST00000608858 DCTN3O75935 186 aa6.49□□□□□ -1.37
CTCFL-220ENST00000608858 CD37P11049 281 aa6.49□□□□□ -1.37
CTCFL-220ENST00000608858 HLA-GP17693 338 aa6.49□□□□□ -1.37
CTCFL-220ENST00000608858 TMEM50BP56557 158 aa6.49□□□□□ -1.37
CTCFL-220ENST00000608858 FAM3BP58499 235 aaPredicted RBP6.49□□□□□ -1.37
CTCFL-220ENST00000608858 RPL8P62917 257 aaKnown RBP6.49□□□□□ -1.37
CTCFL-220ENST00000608858 ARFRP1Q13795 201 aa6.49□□□□□ -1.37
CTCFL-220ENST00000608858 FLOT2Q14254 428 aa6.49□□□□□ -1.37
CTCFL-220ENST00000608858 CCDC58Q4VC31 144 aa6.49□□□□□ -1.37
CTCFL-220ENST00000608858 SPSB3Q6PJ21 355 aa6.49□□□□□ -1.37
CTCFL-220ENST00000608858 PUSL1Q8N0Z8 303 aaKnown RBP6.49□□□□□ -1.37
CTCFL-220ENST00000608858 STXBP6Q8NFX7 210 aa6.49□□□□□ -1.37
CTCFL-220ENST00000608858 UHRF2Q96PU4 802 aa6.49□□□□□ -1.37
CTCFL-220ENST00000608858 RAB40CQ96S21 281 aa6.49□□□□□ -1.37
CTCFL-220ENST00000608858 GABARAPL3Q9BY60 117 aa6.49□□□□□ -1.37
CTCFL-220ENST00000608858 Q9H8V8 135 aa6.49□□□□□ -1.37
CTCFL-220ENST00000608858 HRASLSQ9HDD0 168 aa6.49□□□□□ -1.37
CTCFL-220ENST00000608858 BABAM2Q9NXR7 383 aa6.49□□□□□ -1.37
CTCFL-220ENST00000608858 C21orf62Q9NYP8 219 aa6.49□□□□□ -1.37
CTCFL-220ENST00000608858 DKK2Q9UBU2 259 aa6.49□□□□□ -1.37
CTCFL-220ENST00000608858 SPATA2Q9UM82 520 aa6.49□□□□□ -1.37
CTCFL-220ENST00000608858 LRP1Q07954 4544 aaKnown RBP6.49□□□□□ -1.37
CTCFL-220ENST00000608858 TRBV6-7A0A0A0MS04 114 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 IGLC7A0M8Q6 106 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 SAC3D1A6NKF1 404 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 SNTNA6NMZ2 147 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 EIF4EBP3O60516 100 aaPredicted RBP6.48□□□□□ -1.37
CTCFL-220ENST00000608858 IGKV3-20P01619 116 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 OR13C7P0DN81 318 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 SERPINB10P48595 397 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 BRWD1-AS2P59051 145 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 IRF3Q14653 427 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 ICAM4Q14773 271 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 GSG1LQ6UXU4 331 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 KCTD9Q7L273 389 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 CDH26Q8IXH8 852 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 OR4A4PQ8NGN8 299 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 SMIM19Q96E16 107 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 UQCC2Q9BRT2 126 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 GINS4Q9BRT9 223 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 TM2D1Q9BX74 207 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 PECRQ9BY49 303 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 C12orf4Q9NQ89 552 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 GHRLQ9UBU3 117 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 CLEC2DQ9UHP7 191 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 MGAT4AQ9UM21 535 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 PRELID3BQ9Y3B1 194 aa6.48□□□□□ -1.37
CTCFL-220ENST00000608858 IFNA5P01569 189 aa6.47□□□□□ -1.37
CTCFL-220ENST00000608858 EIF4EP06730 217 aaKnown RBP6.47□□□□□ -1.37
CTCFL-220ENST00000608858 CCL18P55774 89 aa6.47□□□□□ -1.37
CTCFL-220ENST00000608858 INSL4Q14641 139 aa6.47□□□□□ -1.37
CTCFL-220ENST00000608858 P2RY14Q15391 338 aa6.47□□□□□ -1.37
CTCFL-220ENST00000608858 SSX7Q7RTT5 188 aa6.47□□□□□ -1.37
CTCFL-220ENST00000608858 LRRTM1Q86UE6 522 aa6.47□□□□□ -1.37
CTCFL-220ENST00000608858 VSTM2AQ8TAG5 236 aa6.47□□□□□ -1.37
CTCFL-220ENST00000608858 TCTEX1D2Q8WW35 142 aa6.47□□□□□ -1.37
CTCFL-220ENST00000608858 DGCR14Q96DF8 476 aaKnown RBP6.47□□□□□ -1.37
CTCFL-220ENST00000608858 SLC29A1Q99808 456 aa6.47□□□□□ -1.37
CTCFL-220ENST00000608858 HINT2Q9BX68 163 aa6.47□□□□□ -1.37
CTCFL-220ENST00000608858 GABARAPL1Q9H0R8 117 aa6.47□□□□□ -1.37
CTCFL-220ENST00000608858 LPAR5Q9H1C0 372 aa6.47□□□□□ -1.37
CTCFL-220ENST00000608858 ARL2BPQ9Y2Y0 163 aa6.47□□□□□ -1.37
CTCFL-220ENST00000608858 SERPINE2P07093 398 aa6.46□□□□□ -1.38
CTCFL-220ENST00000608858 HOXB6P17509 224 aaKnown RBP6.46□□□□□ -1.38
CTCFL-220ENST00000608858 CELP19835 753 aa6.46□□□□□ -1.38
CTCFL-220ENST00000608858 DAD1P61803 113 aa6.46□□□□□ -1.38
CTCFL-220ENST00000608858 QRFPP83859 136 aa6.46□□□□□ -1.38
CTCFL-220ENST00000608858 SMN1Q16637 294 aaKnown RBP6.46□□□□□ -1.38
CTCFL-220ENST00000608858 YIF1BQ5BJH7 314 aa6.46□□□□□ -1.38
CTCFL-220ENST00000608858 PLAC9Q5JTB6 97 aa6.46□□□□□ -1.38
CTCFL-220ENST00000608858 TOMM20LQ6UXN7 152 aa6.46□□□□□ -1.38
CTCFL-220ENST00000608858 TMPRSS11AQ6ZMR5 421 aa6.46□□□□□ -1.38
CTCFL-220ENST00000608858 OR10C1Q96KK4 312 aa6.46□□□□□ -1.38
CTCFL-220ENST00000608858 DERL3Q96Q80 235 aa6.46□□□□□ -1.38
CTCFL-220ENST00000608858 OAZ3Q9UMX2 235 aa6.46□□□□□ -1.38
CTCFL-220ENST00000608858 MRPS7Q9Y2R9 242 aaKnown RBP6.46□□□□□ -1.38
CTCFL-220ENST00000608858 A0A075B6Q4 140 aa6.45□□□□□ -1.38
CTCFL-220ENST00000608858 IGKV1D-8A0A087WSZ0 117 aa6.45□□□□□ -1.38
CTCFL-220ENST00000608858 TMEM14DPA8MWL7 114 aa6.45□□□□□ -1.38
CTCFL-220ENST00000608858 F5H768 121 aa6.45□□□□□ -1.38
CTCFL-220ENST00000608858 K7EIM0 57 aa6.45□□□□□ -1.38
CTCFL-220ENST00000608858 K7EQG2 157 aa6.45□□□□□ -1.38
CTCFL-220ENST00000608858 TNFSF12O43508 249 aa6.45□□□□□ -1.38
CTCFL-220ENST00000608858 PRM2P04554 102 aa6.45□□□□□ -1.38
CTCFL-220ENST00000608858 UBBP0CG47 229 aa6.45□□□□□ -1.38
CTCFL-220ENST00000608858 GNB3P16520 340 aa6.45□□□□□ -1.38
CTCFL-220ENST00000608858 GABRB1P18505 474 aa6.45□□□□□ -1.38
CTCFL-220ENST00000608858 BTF3P20290 206 aaKnown RBP6.45□□□□□ -1.38
CTCFL-220ENST00000608858 NFYAP23511 347 aaPredicted RBP6.45□□□□□ -1.38
CTCFL-220ENST00000608858 TAS2R43P59537 309 aa6.45□□□□□ -1.38
CTCFL-220ENST00000608858 RELQ04864 619 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms