RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 CHRNA7P36544 502 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 DYNLT3P51808 116 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 TNXAQ16473 311 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 FAM120AOSQ5T036 256 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 ZNF767PQ75MW2 155 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 MRPL41Q8IXM3 137 aaKnown RBP14.39□□□□□ -0.11
VRK3-225ENST00000601912 STOML3Q8TAV4 291 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 NANPQ8TBE9 248 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 ST8SIA2Q92186 375 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 BSCL2Q96G97 398 aaPredicted RBP14.39□□□□□ -0.11
VRK3-225ENST00000601912 OR4C12Q96R67 309 aa14.39□□□□□ -0.11
VRK3-225ENST00000601912 PDZD2O15018 2839 aa14.38□□□□□ -0.11
VRK3-225ENST00000601912 ERHP84090 104 aaKnown RBP14.38□□□□□ -0.11
VRK3-225ENST00000601912 ZNF266Q14584 549 aa14.38□□□□□ -0.11
VRK3-225ENST00000601912 MRGPRG-AS1Q2M3A8 158 aa14.38□□□□□ -0.11
VRK3-225ENST00000601912 CIARTQ8N365 385 aaPredicted RBP14.38□□□□□ -0.11
VRK3-225ENST00000601912 ZNF680Q8NEM1 530 aa14.38□□□□□ -0.11
VRK3-225ENST00000601912 DFFBO76075 338 aa14.37□□□□□ -0.11
VRK3-225ENST00000601912 RPL27AP46776 148 aaKnown RBP14.37□□□□□ -0.11
VRK3-225ENST00000601912 COMPP49747 757 aaPredicted RBP14.37□□□□□ -0.11
VRK3-225ENST00000601912 RAB11AP62491 216 aa14.37□□□□□ -0.11
VRK3-225ENST00000601912 GNB1P62873 340 aa14.37□□□□□ -0.11
VRK3-225ENST00000601912 CLINT1Q14677 625 aa14.37□□□□□ -0.11
VRK3-225ENST00000601912 C5orf64Q2M2E5 130 aa14.37□□□□□ -0.11
VRK3-225ENST00000601912 RPL7L1Q6DKI1 246 aaKnown RBP14.37□□□□□ -0.11
VRK3-225ENST00000601912 STPG2Q8N412 459 aa14.37□□□□□ -0.11
VRK3-225ENST00000601912 SLC24A4Q8NFF2 622 aa14.37□□□□□ -0.11
VRK3-225ENST00000601912 OR10P1Q8NGE3 313 aa14.37□□□□□ -0.11
VRK3-225ENST00000601912 INS-IGF2F8WCM5 200 aa14.36□□□□□ -0.11
VRK3-225ENST00000601912 ABCA1O95477 2261 aa14.36□□□□□ -0.11
VRK3-225ENST00000601912 CFDP00746 253 aaPredicted RBP14.36□□□□□ -0.11
VRK3-225ENST00000601912 OR8U8P0C7N1 319 aa14.36□□□□□ -0.11
VRK3-225ENST00000601912 ATP5IP56385 69 aaPredicted RBP14.36□□□□□ -0.11
VRK3-225ENST00000601912 OR8G2PQ6IF36 304 aa14.36□□□□□ -0.11
VRK3-225ENST00000601912 BAP18Q8IXM2 172 aa14.36□□□□□ -0.11
VRK3-225ENST00000601912 UBAC2Q8NBM4 344 aa14.36□□□□□ -0.11
VRK3-225ENST00000601912 PINX1Q96BK5 328 aaKnown RBP14.36□□□□□ -0.11
VRK3-225ENST00000601912 C15orf62A8K5M9 175 aa14.36□□□□□ -0.11
VRK3-225ENST00000601912 CNIH1O95406 144 aa14.36□□□□□ -0.11
VRK3-225ENST00000601912 NPY1RP25929 384 aa14.36□□□□□ -0.11
VRK3-225ENST00000601912 SNCAP37840 140 aa14.36□□□□□ -0.11
VRK3-225ENST00000601912 HTR2BP41595 481 aa14.36□□□□□ -0.11
VRK3-225ENST00000601912 EXOSC2Q13868 293 aaKnown RBP14.36□□□□□ -0.11
VRK3-225ENST00000601912 LRRC75BQ2VPJ9 315 aa14.36□□□□□ -0.11
VRK3-225ENST00000601912 C10orf55Q5SWW7 151 aa14.36□□□□□ -0.11
VRK3-225ENST00000601912 LILRB2Q8N423 598 aa14.36□□□□□ -0.11
VRK3-225ENST00000601912 TEX29Q8N6K0 151 aa14.36□□□□□ -0.11
VRK3-225ENST00000601912 PHYHIPLQ96FC7 376 aa14.36□□□□□ -0.11
VRK3-225ENST00000601912 ATP5SQ99766 215 aa14.36□□□□□ -0.11
VRK3-225ENST00000601912 SSX3Q99909 188 aa14.36□□□□□ -0.11
VRK3-225ENST00000601912 WFDC1Q9HC57 220 aa14.36□□□□□ -0.11
VRK3-225ENST00000601912 UBQLN2Q9UHD9 624 aa14.36□□□□□ -0.11
VRK3-225ENST00000601912 E7EUB6 86 aa14.35□□□□□ -0.11
VRK3-225ENST00000601912 FCN1O00602 326 aa14.35□□□□□ -0.11
VRK3-225ENST00000601912 CA2P00918 260 aa14.35□□□□□ -0.11
VRK3-225ENST00000601912 SLC38A11Q08AI6 406 aa14.35□□□□□ -0.11
VRK3-225ENST00000601912 FBLN7Q53RD9 439 aa14.35□□□□□ -0.11
VRK3-225ENST00000601912 OR10W1Q8NGF6 305 aa14.35□□□□□ -0.11
VRK3-225ENST00000601912 IFNA4P05014 189 aa14.34□□□□□ -0.11
VRK3-225ENST00000601912 ARL16Q0P5N6 197 aa14.34□□□□□ -0.11
VRK3-225ENST00000601912 AANATQ16613 207 aa14.34□□□□□ -0.11
VRK3-225ENST00000601912 ATP6V1FQ16864 119 aa14.34□□□□□ -0.11
VRK3-225ENST00000601912 EIF5AL1Q6IS14 154 aaKnown RBP14.34□□□□□ -0.11
VRK3-225ENST00000601912 ETV3LQ6ZN32 361 aa14.34□□□□□ -0.11
VRK3-225ENST00000601912 HAPLN4Q86UW8 402 aa14.34□□□□□ -0.11
VRK3-225ENST00000601912 CGB1A6NKQ9 187 aa14.33□□□□□ -0.11
VRK3-225ENST00000601912 PMS2P5A8MQ11 134 aa14.33□□□□□ -0.11
VRK3-225ENST00000601912 IFNA5P01569 189 aa14.33□□□□□ -0.11
VRK3-225ENST00000601912 SUB1P53999 127 aaKnown RBP eCLIP14.33□□□□□ -0.11
VRK3-225ENST00000601912 ALKAL2Q6UX46 152 aa14.33□□□□□ -0.11
VRK3-225ENST00000601912 HSD17B13Q7Z5P4 300 aaPredicted RBP14.33□□□□□ -0.11
VRK3-225ENST00000601912 SRSF12Q8WXF0 261 aaKnown RBP14.33□□□□□ -0.11
VRK3-225ENST00000601912 RASL11BQ9BPW5 248 aa14.33□□□□□ -0.11
VRK3-225ENST00000601912 ITPR3Q14573 2671 aa14.33□□□□□ -0.12
VRK3-225ENST00000601912 FSHBP01225 129 aa14.33□□□□□ -0.12
VRK3-225ENST00000601912 OR13C7P0DN81 318 aa14.33□□□□□ -0.12
VRK3-225ENST00000601912 FXYD3Q14802 87 aa14.33□□□□□ -0.12
VRK3-225ENST00000601912 SLC25A24Q6NUK1 477 aa14.33□□□□□ -0.12
VRK3-225ENST00000601912 ZNF562Q6V9R5 426 aa14.33□□□□□ -0.12
VRK3-225ENST00000601912 Q8N9W7 124 aa14.33□□□□□ -0.12
VRK3-225ENST00000601912 SCARB1Q8WTV0 552 aa14.33□□□□□ -0.12
VRK3-225ENST00000601912 SRSF8Q9BRL6 282 aaKnown RBP14.33□□□□□ -0.12
VRK3-225ENST00000601912 SOX21Q9Y651 276 aaPredicted RBP14.33□□□□□ -0.12
VRK3-225ENST00000601912 CSPG4Q6UVK1 2322 aa14.32□□□□□ -0.12
VRK3-225ENST00000601912 A0A1B0GW64 132 aa14.32□□□□□ -0.12
VRK3-225ENST00000601912 WT1-ASQ06250 92 aa14.32□□□□□ -0.12
VRK3-225ENST00000601912 C2orf83Q53S99 150 aa14.32□□□□□ -0.12
VRK3-225ENST00000601912 PIFOQ8TCI5 191 aa14.32□□□□□ -0.12
VRK3-225ENST00000601912 RBM14Q96PK6 669 aaKnown RBP14.32□□□□□ -0.12
VRK3-225ENST00000601912 PLXNB1O43157 2135 aa14.31□□□□□ -0.12
VRK3-225ENST00000601912 H3BUX3 64 aa14.31□□□□□ -0.12
VRK3-225ENST00000601912 BSXQ3C1V8 233 aa14.31□□□□□ -0.12
VRK3-225ENST00000601912 C9orf139Q6ZV77 190 aa14.31□□□□□ -0.12
VRK3-225ENST00000601912 SCGB1C1Q8TD33 95 aa14.31□□□□□ -0.12
VRK3-225ENST00000601912 TMEM170AQ8WVE7 144 aa14.31□□□□□ -0.12
VRK3-225ENST00000601912 SLC25A33Q9BSK2 321 aa14.31□□□□□ -0.12
VRK3-225ENST00000601912 TMEM147Q9BVK8 224 aa14.31□□□□□ -0.12
VRK3-225ENST00000601912 GGACTQ9BVM4 153 aa14.31□□□□□ -0.12
VRK3-225ENST00000601912 ARV1Q9H2C2 271 aa14.31□□□□□ -0.12
VRK3-225ENST00000601912 PITPNC1Q9UKF7 332 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms