RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 SSR3Q9UNL2 185 aa7.13□□□□□ -1.27
VRK3-224ENST00000601849 OR2T8A6NH00 312 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 MPTX1A8MV57 137 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 SULT1C2O00338 296 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 UPK2O00526 184 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 SNAPC5O75971 98 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 SERPINE2P07093 398 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 OR13C7P0DN81 318 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 RPA2P15927 270 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 CBX5P45973 191 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 RELQ04864 619 aaPredicted RBP7.12□□□□□ -1.27
VRK3-224ENST00000601849 EIF4EBP1Q13541 118 aaPredicted RBP7.12□□□□□ -1.27
VRK3-224ENST00000601849 LGALS9CQ6DKI2 356 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 GDPD1Q8N9F7 314 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 OR1L8Q8NGR8 309 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 GATAD1Q8WUU5 269 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 PHLDA1Q8WV24 401 aaPredicted RBP7.12□□□□□ -1.27
VRK3-224ENST00000601849 TMEM190Q8WZ59 177 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 TMEM56Q96MV1 263 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 CSTL1Q9H114 145 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 MAP6D1Q9H9H5 199 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 PLEKHA2Q9HB19 425 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 DIABLOQ9NR28 239 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 FKBP11Q9NYL4 201 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 C21orf62Q9NYP8 219 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 KMT2AQ03164 3969 aa7.12□□□□□ -1.27
VRK3-224ENST00000601849 TRAV18A0A075B6X5 111 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 A0A0A6YYH2 397 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 A0A1B0GW64 132 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 A6NJ64 397 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 C15orf62A8K5M9 175 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 NUPL2O15504 423 aaKnown RBP7.11□□□□□ -1.27
VRK3-224ENST00000601849 MRPS14O60783 128 aaKnown RBP7.11□□□□□ -1.27
VRK3-224ENST00000601849 YIF1AO95070 293 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 PPYP01298 95 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 CD5P06127 495 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 RPL35AP18077 110 aaKnown RBP7.11□□□□□ -1.27
VRK3-224ENST00000601849 S100GP29377 79 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 FGF9P31371 208 aaPredicted RBP7.11□□□□□ -1.27
VRK3-224ENST00000601849 ADMP35318 185 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 SCAND1P57086 179 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 TCTAP57738 103 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 BRWD1-AS2P59051 145 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 FXYD4P59646 89 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 HERV-K104P61576 105 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 POU2AF1Q16633 256 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 Q56UQ5 140 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 AADACL3Q5VUY0 350 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 HOGA1Q86XE5 327 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 CMTM1Q8IZ96 169 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 UBAC2Q8NBM4 344 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 OR5B3Q8NH48 314 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 C11orf45Q8TAV5 145 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 GIMAP1Q8WWP7 306 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 LSM10Q969L4 123 aaKnown RBP7.11□□□□□ -1.27
VRK3-224ENST00000601849 CNBD2Q96M20 576 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 RARRES2Q99969 163 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 HINT2Q9BX68 163 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 TMEM140Q9NV12 185 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 RHBDL2Q9NX52 303 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 COMMD9Q9P000 198 aa7.11□□□□□ -1.27
VRK3-224ENST00000601849 TEX50A0A1B0GTY4 177 aa7.1□□□□□ -1.27
VRK3-224ENST00000601849 IGLC7A0M8Q6 106 aa7.1□□□□□ -1.27
VRK3-224ENST00000601849 SMIM30A4D0T7 59 aa7.1□□□□□ -1.27
VRK3-224ENST00000601849 EIF4EP06730 217 aaKnown RBP7.1□□□□□ -1.27
VRK3-224ENST00000601849 RBMS2Q15434 407 aaKnown RBP7.1□□□□□ -1.27
VRK3-224ENST00000601849 SFXN4Q6P4A7 337 aa7.1□□□□□ -1.27
VRK3-224ENST00000601849 OR5AP2Q8NGF4 316 aa7.1□□□□□ -1.27
VRK3-224ENST00000601849 OR10W1Q8NGF6 305 aa7.1□□□□□ -1.27
VRK3-224ENST00000601849 OR51H1Q8NH63 302 aa7.1□□□□□ -1.27
VRK3-224ENST00000601849 SCARB1Q8WTV0 552 aa7.1□□□□□ -1.27
VRK3-224ENST00000601849 FCGR1BQ92637 280 aa7.1□□□□□ -1.27
VRK3-224ENST00000601849 GPHA2Q96T91 129 aa7.1□□□□□ -1.27
VRK3-224ENST00000601849 TXNL4BQ9NX01 149 aaKnown RBP7.1□□□□□ -1.27
VRK3-224ENST00000601849 RAB26Q9ULW5 256 aa7.1□□□□□ -1.27
VRK3-224ENST00000601849 ETV7Q9Y603 341 aa7.1□□□□□ -1.27
VRK3-224ENST00000601849 F11RQ9Y624 299 aaKnown RBP7.1□□□□□ -1.27
VRK3-224ENST00000601849 TRAV14DV4A0A0A6YYC5 116 aa7.09□□□□□ -1.27
VRK3-224ENST00000601849 CGB1A6NKQ9 187 aa7.09□□□□□ -1.27
VRK3-224ENST00000601849 MARCH11A6NNE9 402 aa7.09□□□□□ -1.27
VRK3-224ENST00000601849 SSX5O60225 188 aa7.09□□□□□ -1.27
VRK3-224ENST00000601849 TMEM127O75204 238 aa7.09□□□□□ -1.27
VRK3-224ENST00000601849 CTSDP07339 412 aaPredicted RBP7.09□□□□□ -1.27
VRK3-224ENST00000601849 F2RP25116 425 aa7.09□□□□□ -1.27
VRK3-224ENST00000601849 PSMB9P28065 219 aa7.09□□□□□ -1.27
VRK3-224ENST00000601849 MFAP4P55083 255 aa7.09□□□□□ -1.27
VRK3-224ENST00000601849 TMEM17Q86X19 198 aa7.09□□□□□ -1.27
VRK3-224ENST00000601849 TMEM116Q8NCL8 245 aa7.09□□□□□ -1.27
VRK3-224ENST00000601849 LGALS14Q8TCE9 139 aa7.09□□□□□ -1.27
VRK3-224ENST00000601849 C2CD4CQ8TF44 421 aa7.09□□□□□ -1.27
VRK3-224ENST00000601849 TSC22D3Q99576 134 aa7.09□□□□□ -1.27
VRK3-224ENST00000601849 GINS3Q9BRX5 216 aa7.09□□□□□ -1.27
VRK3-224ENST00000601849 IFT46Q9NQC8 304 aa7.09□□□□□ -1.27
VRK3-224ENST00000601849 NDUFA4L2Q9NRX3 87 aa7.09□□□□□ -1.27
VRK3-224ENST00000601849 FBXL17Q9UF56 701 aa7.09□□□□□ -1.27
VRK3-224ENST00000601849 SMPXQ9UHP9 88 aa7.09□□□□□ -1.27
VRK3-224ENST00000601849 PRNDQ9UKY0 176 aa7.09□□□□□ -1.27
VRK3-224ENST00000601849 OR51B2Q9Y5P1 312 aa7.09□□□□□ -1.27
VRK3-224ENST00000601849 TRAV3A0A0B4J244 114 aa7.08□□□□□ -1.28
VRK3-224ENST00000601849 DNASE2O00115 360 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms