RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 TRBV7-1A0A0A6YYK4 115 aa12.8□□□□□ -0.36
NOTCH3-205ENST00000600841 GABARAPH6UMI1 98 aa12.8□□□□□ -0.36
NOTCH3-205ENST00000600841 HLA-AP01891 365 aaKnown RBP12.8□□□□□ -0.36
NOTCH3-205ENST00000600841 OR13C7P0DN81 318 aa12.8□□□□□ -0.36
NOTCH3-205ENST00000600841 ARL3P36405 182 aa12.8□□□□□ -0.36
NOTCH3-205ENST00000600841 TAS2R19P59542 299 aa12.8□□□□□ -0.36
NOTCH3-205ENST00000600841 MRPS10P82664 201 aaKnown RBP12.8□□□□□ -0.36
NOTCH3-205ENST00000600841 LHFPL1Q86WI0 220 aa12.8□□□□□ -0.36
NOTCH3-205ENST00000600841 GDPD1Q8N9F7 314 aa12.8□□□□□ -0.36
NOTCH3-205ENST00000600841 TMEM229BQ8NBD8 167 aa12.8□□□□□ -0.36
NOTCH3-205ENST00000600841 ISOC1Q96CN7 298 aa12.8□□□□□ -0.36
NOTCH3-205ENST00000600841 ZNF486Q96H40 463 aaPredicted RBP12.8□□□□□ -0.36
NOTCH3-205ENST00000600841 TSC22D3Q99576 134 aa12.8□□□□□ -0.36
NOTCH3-205ENST00000600841 HINT2Q9BX68 163 aa12.8□□□□□ -0.36
NOTCH3-205ENST00000600841 NDUFA4L2Q9NRX3 87 aa12.8□□□□□ -0.36
NOTCH3-205ENST00000600841 FKBP11Q9NYL4 201 aa12.8□□□□□ -0.36
NOTCH3-205ENST00000600841 THYN1Q9P016 225 aa12.8□□□□□ -0.36
NOTCH3-205ENST00000600841 DMRT1Q9Y5R6 373 aa12.8□□□□□ -0.36
NOTCH3-205ENST00000600841 MFSD2BA6NFX1 497 aa12.79□□□□□ -0.36
NOTCH3-205ENST00000600841 OR2C1O95371 312 aa12.79□□□□□ -0.36
NOTCH3-205ENST00000600841 SERPINE2P07093 398 aa12.79□□□□□ -0.36
NOTCH3-205ENST00000600841 PTBP1P26599 531 aaKnown RBP eCLIP12.79□□□□□ -0.36
NOTCH3-205ENST00000600841 RND3P61587 244 aa12.79□□□□□ -0.36
NOTCH3-205ENST00000600841 WT1-ASQ06250 92 aa12.79□□□□□ -0.36
NOTCH3-205ENST00000600841 LCN12Q6JVE5 192 aa12.79□□□□□ -0.36
NOTCH3-205ENST00000600841 Q8N402 240 aa12.79□□□□□ -0.36
NOTCH3-205ENST00000600841 DYNC2LI1Q8TCX1 351 aa12.79□□□□□ -0.36
NOTCH3-205ENST00000600841 LSM10Q969L4 123 aaKnown RBP12.79□□□□□ -0.36
NOTCH3-205ENST00000600841 CEPT1Q9Y6K0 416 aa12.79□□□□□ -0.36
NOTCH3-205ENST00000600841 U3KQK5 164 aa12.79□□□□□ -0.36
NOTCH3-205ENST00000600841 H3BMQ9 156 aa12.78□□□□□ -0.36
NOTCH3-205ENST00000600841 RAB3DO95716 219 aa12.78□□□□□ -0.36
NOTCH3-205ENST00000600841 CD74P04233 296 aa12.78□□□□□ -0.36
NOTCH3-205ENST00000600841 FRMD6-AS1P0C7T7 363 aa12.78□□□□□ -0.36
NOTCH3-205ENST00000600841 PI3P19957 117 aa12.78□□□□□ -0.36
NOTCH3-205ENST00000600841 SSBP1Q04837 148 aaKnown RBP12.78□□□□□ -0.36
NOTCH3-205ENST00000600841 STEAP1BQ6NZ63 245 aa12.78□□□□□ -0.36
NOTCH3-205ENST00000600841 H2BFWTQ7Z2G1 175 aa12.78□□□□□ -0.36
NOTCH3-205ENST00000600841 GPHB5Q86YW7 130 aa12.78□□□□□ -0.36
NOTCH3-205ENST00000600841 SGPP2Q8IWX5 399 aa12.78□□□□□ -0.36
NOTCH3-205ENST00000600841 OR4D10Q8NGI6 311 aa12.78□□□□□ -0.36
NOTCH3-205ENST00000600841 OR2K2Q8NGT1 345 aa12.78□□□□□ -0.36
NOTCH3-205ENST00000600841 OR5B3Q8NH48 314 aa12.78□□□□□ -0.36
NOTCH3-205ENST00000600841 DYNLRB2Q8TF09 96 aa12.78□□□□□ -0.36
NOTCH3-205ENST00000600841 DIRAS2Q96HU8 199 aa12.78□□□□□ -0.36
NOTCH3-205ENST00000600841 SEC22AQ96IW7 307 aa12.78□□□□□ -0.36
NOTCH3-205ENST00000600841 TMEM14BQ9NUH8 114 aa12.78□□□□□ -0.36
NOTCH3-205ENST00000600841 RABL2AQ9UBK7 228 aaPredicted RBP12.78□□□□□ -0.36
NOTCH3-205ENST00000600841 RABL2BQ9UNT1 228 aa12.78□□□□□ -0.36
NOTCH3-205ENST00000600841 C15orf61A6NNL5 157 aa12.77□□□□□ -0.37
NOTCH3-205ENST00000600841 LGALS9O00182 355 aa12.77□□□□□ -0.37
NOTCH3-205ENST00000600841 CLEC3BP05452 202 aa12.77□□□□□ -0.37
NOTCH3-205ENST00000600841 MECP2P51608 486 aaKnown RBP12.77□□□□□ -0.37
NOTCH3-205ENST00000600841 PPP5CP53041 499 aa12.77□□□□□ -0.37
NOTCH3-205ENST00000600841 PIGPP57054 158 aa12.77□□□□□ -0.37
NOTCH3-205ENST00000600841 SCGB2B2Q4G0G5 96 aa12.77□□□□□ -0.37
NOTCH3-205ENST00000600841 FAM106AQ4KMX7 169 aa12.77□□□□□ -0.37
NOTCH3-205ENST00000600841 SLC25A24Q6NUK1 477 aa12.77□□□□□ -0.37
NOTCH3-205ENST00000600841 Q8N1Y9 231 aa12.77□□□□□ -0.37
NOTCH3-205ENST00000600841 OR4A16Q8NH70 328 aa12.77□□□□□ -0.37
NOTCH3-205ENST00000600841 TERB2Q8NHR7 220 aa12.77□□□□□ -0.37
NOTCH3-205ENST00000600841 ZNF502Q8TBZ5 544 aa12.77□□□□□ -0.37
NOTCH3-205ENST00000600841 ZFAND1Q8TCF1 268 aa12.77□□□□□ -0.37
NOTCH3-205ENST00000600841 SMIM4Q8WVI0 70 aa12.77□□□□□ -0.37
NOTCH3-205ENST00000600841 MRGPRFQ96AM1 343 aa12.77□□□□□ -0.37
NOTCH3-205ENST00000600841 TMEM56Q96MV1 263 aa12.77□□□□□ -0.37
NOTCH3-205ENST00000600841 WWC2-AS2Q96NR7 200 aa12.77□□□□□ -0.37
NOTCH3-205ENST00000600841 C6orf62Q9GZU0 229 aaPredicted RBP12.77□□□□□ -0.37
NOTCH3-205ENST00000600841 ZNF320A2RRD8 509 aa12.76□□□□□ -0.37
NOTCH3-205ENST00000600841 C2orf70A6NJV1 201 aa12.76□□□□□ -0.37
NOTCH3-205ENST00000600841 DBX1A6NMT0 343 aa12.76□□□□□ -0.37
NOTCH3-205ENST00000600841 IGKV1-39P01597 117 aa12.76□□□□□ -0.37
NOTCH3-205ENST00000600841 IGKV1D-39P04432 117 aa12.76□□□□□ -0.37
NOTCH3-205ENST00000600841 FOLR2P14207 255 aa12.76□□□□□ -0.37
NOTCH3-205ENST00000600841 IL18Q14116 193 aa12.76□□□□□ -0.37
NOTCH3-205ENST00000600841 MEF2DQ14814 521 aa12.76□□□□□ -0.37
NOTCH3-205ENST00000600841 ADAMTSL5Q6ZMM2 481 aa12.76□□□□□ -0.37
NOTCH3-205ENST00000600841 GTSCR1Q86UQ5 136 aa12.76□□□□□ -0.37
NOTCH3-205ENST00000600841 SBSPONQ8IVN8 264 aa12.76□□□□□ -0.37
NOTCH3-205ENST00000600841 VN1R17PQ8TDU5 208 aa12.76□□□□□ -0.37
NOTCH3-205ENST00000600841 COPZ2Q9P299 210 aa12.76□□□□□ -0.37
NOTCH3-205ENST00000600841 F11RQ9Y624 299 aaKnown RBP12.76□□□□□ -0.37
NOTCH3-205ENST00000600841 TENM3Q9P273 2699 aa12.76□□□□□ -0.37
NOTCH3-205ENST00000600841 HUWE1Q7Z6Z7 4374 aaKnown RBP12.76□□□□□ -0.37
NOTCH3-205ENST00000600841 STAB2Q8WWQ8 2551 aa12.76□□□□□ -0.37
NOTCH3-205ENST00000600841 IZUMO1RA6ND01 250 aa12.75□□□□□ -0.37
NOTCH3-205ENST00000600841 CTDSPLO15194 276 aa12.75□□□□□ -0.37
NOTCH3-205ENST00000600841 IGHV4-30-4P0DP06 118 aa12.75□□□□□ -0.37
NOTCH3-205ENST00000600841 GPR183P32249 361 aa12.75□□□□□ -0.37
NOTCH3-205ENST00000600841 CD300EQ496F6 205 aaPredicted RBP12.75□□□□□ -0.37
NOTCH3-205ENST00000600841 CCDC71LQ8N9Z2 235 aa12.75□□□□□ -0.37
NOTCH3-205ENST00000600841 OR1L6Q8NGR2 347 aa12.75□□□□□ -0.37
NOTCH3-205ENST00000600841 OR13C8Q8NGS7 320 aa12.75□□□□□ -0.37
NOTCH3-205ENST00000600841 ZC4H2Q9NQZ6 224 aa12.75□□□□□ -0.37
NOTCH3-205ENST00000600841 C3orf85A0A1B0GTC6 90 aa12.74□□□□□ -0.37
NOTCH3-205ENST00000600841 DEFB114Q30KQ6 69 aa12.74□□□□□ -0.37
NOTCH3-205ENST00000600841 PLET1Q6UQ28 207 aa12.74□□□□□ -0.37
NOTCH3-205ENST00000600841 TP53RKQ96S44 253 aa12.74□□□□□ -0.37
NOTCH3-205ENST00000600841 THAP7Q9BT49 309 aaPredicted RBP12.74□□□□□ -0.37
NOTCH3-205ENST00000600841 SLIRPQ9GZT3 109 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms