RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 IL3RAP26951 378 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 SPCS3P61009 180 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 RHOBP62745 196 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 WDR31Q8NA23 367 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 HSPB9Q9BQS6 159 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 MRPL37Q9BZE1 423 aaKnown RBP10.28□□□□□ -0.76
USHBP1-207ENST00000597928 SMDT1Q9H4I9 107 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 PARD6AQ9NPB6 346 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 MANBALQ9NQG1 85 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 RNF7Q9UBF6 113 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 KIAA1549Q9HCM3 1950 aa10.28□□□□□ -0.76
USHBP1-207ENST00000597928 FAM90A27PA6NNH2 459 aa10.27□□□□□ -0.76
USHBP1-207ENST00000597928 MOSP00540 346 aa10.27□□□□□ -0.76
USHBP1-207ENST00000597928 APOA2P02652 100 aa10.27□□□□□ -0.76
USHBP1-207ENST00000597928 ADH4P08319 380 aa10.27□□□□□ -0.76
USHBP1-207ENST00000597928 ZNF137PP52743 207 aa10.27□□□□□ -0.76
USHBP1-207ENST00000597928 MZT1Q08AG7 82 aa10.27□□□□□ -0.76
USHBP1-207ENST00000597928 FOXC1Q12948 553 aa10.27□□□□□ -0.76
USHBP1-207ENST00000597928 NRN1LQ496H8 165 aa10.27□□□□□ -0.76
USHBP1-207ENST00000597928 LEMD1Q68G75 181 aa10.27□□□□□ -0.76
USHBP1-207ENST00000597928 TMEM14EPQ6UXP3 125 aa10.27□□□□□ -0.76
USHBP1-207ENST00000597928 OR1B1Q8NGR6 318 aa10.27□□□□□ -0.76
USHBP1-207ENST00000597928 SLC35E1Q96K37 410 aa10.27□□□□□ -0.76
USHBP1-207ENST00000597928 NPVFQ9HCQ7 196 aa10.27□□□□□ -0.76
USHBP1-207ENST00000597928 MRPS18CQ9Y3D5 142 aaKnown RBP10.27□□□□□ -0.76
USHBP1-207ENST00000597928 DOPEY2Q9Y3R5 2298 aa10.27□□□□□ -0.77
USHBP1-207ENST00000597928 IGHV3-35A0A0C4DH35 117 aa10.27□□□□□ -0.77
USHBP1-207ENST00000597928 HELTA6NFD8 242 aa10.27□□□□□ -0.77
USHBP1-207ENST00000597928 C15orf62A8K5M9 175 aa10.27□□□□□ -0.77
USHBP1-207ENST00000597928 SLC25A17O43808 307 aa10.27□□□□□ -0.77
USHBP1-207ENST00000597928 CNIH1O95406 144 aa10.27□□□□□ -0.77
USHBP1-207ENST00000597928 TREML4Q6UXN2 200 aa10.27□□□□□ -0.77
USHBP1-207ENST00000597928 GFRALQ6UXV0 394 aa10.27□□□□□ -0.77
USHBP1-207ENST00000597928 DBX2Q6ZNG2 339 aa10.27□□□□□ -0.77
USHBP1-207ENST00000597928 CMTM2Q8TAZ6 248 aa10.27□□□□□ -0.77
USHBP1-207ENST00000597928 SSUH2Q9Y2M2 353 aa10.27□□□□□ -0.77
USHBP1-207ENST00000597928 IGHV3OR16-8A0A075B7F1 116 aa10.27□□□□□ -0.77
USHBP1-207ENST00000597928 OR4A8P0C604 315 aa10.27□□□□□ -0.77
USHBP1-207ENST00000597928 GPX4P36969 197 aaPredicted RBP10.27□□□□□ -0.77
USHBP1-207ENST00000597928 AMTP48728 403 aa10.27□□□□□ -0.77
USHBP1-207ENST00000597928 ARHGAP32A7KAX9 2087 aa10.27□□□□□ -0.77
USHBP1-207ENST00000597928 PRRG2O14669 202 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 FAM19A2Q8N3H0 131 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 ZNF439Q8NDP4 499 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 STARD4Q96DR4 205 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 SAP30LQ9HAJ7 183 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 TMEM265A0A087WTH1 108 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 CSN3P07498 182 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 FRMD6-AS1P0C7T7 363 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 PAX5Q02548 391 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 MSMPQ1L6U9 139 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 FAM90A1Q86YD7 464 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 MBD3L1Q8WWY6 194 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 DMRT1Q9Y5R6 373 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 ZNF253O75346 499 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 IGHV2-70P01814 119 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 NUBP1P53384 320 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 LGALS4P56470 323 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 HLA-DRB5Q30154 266 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 CT45A1Q5HYN5 189 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 SIGLECL1Q8N7X8 197 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 CT45A3Q8NHU0 189 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 SFRP2Q96HF1 295 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 GSX1Q9H4S2 264 aaPredicted RBP10.26□□□□□ -0.77
USHBP1-207ENST00000597928 TECRQ9NZ01 308 aaKnown RBP10.26□□□□□ -0.77
USHBP1-207ENST00000597928 COL12A1Q99715 3063 aa10.26□□□□□ -0.77
USHBP1-207ENST00000597928 PYYP10082 97 aa10.25□□□□□ -0.77
USHBP1-207ENST00000597928 TIMP3P35625 211 aa10.25□□□□□ -0.77
USHBP1-207ENST00000597928 ERHP84090 104 aaKnown RBP10.25□□□□□ -0.77
USHBP1-207ENST00000597928 TNXAQ16473 311 aa10.25□□□□□ -0.77
USHBP1-207ENST00000597928 C11orf53Q8IXP5 236 aa10.25□□□□□ -0.77
USHBP1-207ENST00000597928 NPIPB3Q92617 1050 aa10.25□□□□□ -0.77
USHBP1-207ENST00000597928 MGST2Q99735 147 aa10.25□□□□□ -0.77
USHBP1-207ENST00000597928 NABP2Q9BQ15 211 aa10.25□□□□□ -0.77
USHBP1-207ENST00000597928 SLC25A10Q9UBX3 287 aaPredicted RBP10.25□□□□□ -0.77
USHBP1-207ENST00000597928 ELOA3CA0A087WX78 387 aaPredicted RBP10.25□□□□□ -0.77
USHBP1-207ENST00000597928 NKX6-3A6NJ46 265 aa10.25□□□□□ -0.77
USHBP1-207ENST00000597928 LY6HO94772 140 aa10.25□□□□□ -0.77
USHBP1-207ENST00000597928 GCHFRP30047 84 aa10.25□□□□□ -0.77
USHBP1-207ENST00000597928 KRTCAP3Q53RY4 240 aa10.25□□□□□ -0.77
USHBP1-207ENST00000597928 EXPH5Q8NEV8 1989 aa10.25□□□□□ -0.77
USHBP1-207ENST00000597928 CXorf1O96002 111 aa10.25□□□□□ -0.77
USHBP1-207ENST00000597928 RBP4P02753 201 aa10.25□□□□□ -0.77
USHBP1-207ENST00000597928 GPR6P46095 362 aaPredicted RBP10.25□□□□□ -0.77
USHBP1-207ENST00000597928 CSPG4Q6UVK1 2322 aa10.25□□□□□ -0.77
USHBP1-207ENST00000597928 FLYWCH2Q96CP2 140 aaKnown RBP10.25□□□□□ -0.77
USHBP1-207ENST00000597928 P2RX4Q99571 388 aa10.25□□□□□ -0.77
USHBP1-207ENST00000597928 TXN2Q99757 166 aa10.25□□□□□ -0.77
USHBP1-207ENST00000597928 ZNF331Q9NQX6 463 aaPredicted RBP10.25□□□□□ -0.77
USHBP1-207ENST00000597928 MBNL3Q9NUK0 354 aaKnown RBP10.25□□□□□ -0.77
USHBP1-207ENST00000597928 YTHDF2Q9Y5A9 579 aaKnown RBP10.25□□□□□ -0.77
USHBP1-207ENST00000597928 A0A087WWC5 75 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 MUC21A0A0G2JKD1 596 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 MUC21A0A140T8X8 626 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 RBFOX2O43251 390 aaKnown RBP eCLIP10.24□□□□□ -0.77
USHBP1-207ENST00000597928 NPPCP23582 126 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 ERVK11-1P61568 191 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 UBE2G1P62253 170 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 C21orf62-AS1Q17RA5 79 aa10.24□□□□□ -0.77
USHBP1-207ENST00000597928 KRTAP27-1Q3LI81 207 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms