RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 SHISA2Q6UWI4 295 aa17.32■□□□□ 0.36
CHMP2A-204ENST00000597848 OR5M8Q8NGP6 311 aa17.32■□□□□ 0.36
CHMP2A-204ENST00000597848 ZNF431Q8TF32 576 aaPredicted RBP17.32■□□□□ 0.36
CHMP2A-204ENST00000597848 MARVELD1Q9BSK0 173 aa17.32■□□□□ 0.36
CHMP2A-204ENST00000597848 TCRBV4S1A1TA0A5B7 111 aa17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 CGB1A6NKQ9 187 aa17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 DHFRP00374 187 aa17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 IFNA17P01571 189 aa17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 IL5P05113 134 aa17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 ELANEP08246 267 aa17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 SULT1A3P0DMM9 295 aa17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 SULT1A4P0DMN0 295 aa17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 FOXE3Q13461 319 aa17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 NMSQ5H8A3 153 aa17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 TCTEX1D4Q5JR98 221 aa17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 CXorf66Q5JRM2 361 aaPredicted RBP17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 KHDC1LQ5JSQ8 128 aa17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 ZNF429Q86V71 674 aa17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 UXS1Q8NBZ7 420 aa17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 MITD1Q8WV92 249 aa17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 CITED1Q99966 193 aa17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 GPN1Q9HCN4 374 aaPredicted RBP17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 NDUFA4L2Q9NRX3 87 aa17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 COA4Q9NYJ1 87 aa17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 ZNF257Q9Y2Q1 563 aa17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 TMED3Q9Y3Q3 217 aa17.31■□□□□ 0.36
CHMP2A-204ENST00000597848 ST8SIA3O43173 380 aa17.3■□□□□ 0.36
CHMP2A-204ENST00000597848 SOX15O60248 233 aa17.3■□□□□ 0.36
CHMP2A-204ENST00000597848 AREGP15514 252 aa17.3■□□□□ 0.36
CHMP2A-204ENST00000597848 RGS21Q2M5E4 152 aa17.3■□□□□ 0.36
CHMP2A-204ENST00000597848 THOC7Q6I9Y2 204 aaKnown RBP17.3■□□□□ 0.36
CHMP2A-204ENST00000597848 LCNL1Q6ZST4 164 aa17.3■□□□□ 0.36
CHMP2A-204ENST00000597848 OR10W1Q8NGF6 305 aa17.3■□□□□ 0.36
CHMP2A-204ENST00000597848 SPATA3Q8NHX4 192 aa17.3■□□□□ 0.36
CHMP2A-204ENST00000597848 FAM110DQ8TAY7 271 aaPredicted RBP17.3■□□□□ 0.36
CHMP2A-204ENST00000597848 MS4A10Q96PG2 267 aa17.3■□□□□ 0.36
CHMP2A-204ENST00000597848 CITED2Q99967 270 aaPredicted RBP17.3■□□□□ 0.36
CHMP2A-204ENST00000597848 PRAF2O60831 178 aa17.29■□□□□ 0.36
CHMP2A-204ENST00000597848 ADAP1O75689 374 aa17.29■□□□□ 0.36
CHMP2A-204ENST00000597848 IFNA21P01568 189 aa17.29■□□□□ 0.36
CHMP2A-204ENST00000597848 IGLV1-40P01703 118 aa17.29■□□□□ 0.36
CHMP2A-204ENST00000597848 CD83Q01151 205 aa17.29■□□□□ 0.36
CHMP2A-204ENST00000597848 SMCO1Q147U7 214 aa17.29■□□□□ 0.36
CHMP2A-204ENST00000597848 SPINK9Q5DT21 86 aa17.29■□□□□ 0.36
CHMP2A-204ENST00000597848 GGNBP1Q5YKI7 109 aa17.29■□□□□ 0.36
CHMP2A-204ENST00000597848 C12orf45Q8N5I9 185 aaPredicted RBP17.29■□□□□ 0.36
CHMP2A-204ENST00000597848 TTC9CQ8N5M4 171 aa17.29■□□□□ 0.36
CHMP2A-204ENST00000597848 SRSF8Q9BRL6 282 aaKnown RBP17.29■□□□□ 0.36
CHMP2A-204ENST00000597848 A0A1B0GU03 582 aa17.28■□□□□ 0.36
CHMP2A-204ENST00000597848 RPLP1P05386 114 aaKnown RBP17.28■□□□□ 0.36
CHMP2A-204ENST00000597848 REG1AP05451 166 aa17.28■□□□□ 0.36
CHMP2A-204ENST00000597848 OR13C7P0DN81 318 aa17.28■□□□□ 0.36
CHMP2A-204ENST00000597848 PSMB8P28062 276 aa17.28■□□□□ 0.36
CHMP2A-204ENST00000597848 OR1S1Q8NH92 325 aa17.28■□□□□ 0.36
CHMP2A-204ENST00000597848 KLK15Q9H2R5 256 aa17.28■□□□□ 0.36
CHMP2A-204ENST00000597848 A0A1W2PRX2 142 aa17.27■□□□□ 0.36
CHMP2A-204ENST00000597848 IGLC7A0M8Q6 106 aa17.27■□□□□ 0.36
CHMP2A-204ENST00000597848 NXPH3O95157 252 aa17.27■□□□□ 0.36
CHMP2A-204ENST00000597848 PSMB6P28072 239 aa17.27■□□□□ 0.36
CHMP2A-204ENST00000597848 RAB9AP51151 201 aa17.27■□□□□ 0.36
CHMP2A-204ENST00000597848 PRCDQ00LT1 54 aa17.27■□□□□ 0.36
CHMP2A-204ENST00000597848 HSD17B13Q7Z5P4 300 aaPredicted RBP17.27■□□□□ 0.36
CHMP2A-204ENST00000597848 MRPL41Q8IXM3 137 aaKnown RBP17.27■□□□□ 0.36
CHMP2A-204ENST00000597848 PLEKHA3Q9HB20 300 aa17.27■□□□□ 0.36
CHMP2A-204ENST00000597848 ENY2Q9NPA8 101 aa17.27■□□□□ 0.36
CHMP2A-204ENST00000597848 NPIPB5A8MRT5 1133 aa17.26■□□□□ 0.35
CHMP2A-204ENST00000597848 TRGV3P03979 118 aa17.26■□□□□ 0.35
CHMP2A-204ENST00000597848 DEFA4P12838 97 aa17.26■□□□□ 0.35
CHMP2A-204ENST00000597848 TPPP2P59282 170 aa17.26■□□□□ 0.35
CHMP2A-204ENST00000597848 SPCS3P61009 180 aa17.26■□□□□ 0.35
CHMP2A-204ENST00000597848 WT1-ASQ06250 92 aa17.26■□□□□ 0.35
CHMP2A-204ENST00000597848 NSUN5P1Q3KNT7 163 aa17.26■□□□□ 0.35
CHMP2A-204ENST00000597848 CACFD1Q9UGQ2 172 aa17.26■□□□□ 0.35
CHMP2A-204ENST00000597848 TSSC4Q9Y5U2 329 aaPredicted RBP17.26■□□□□ 0.35
CHMP2A-204ENST00000597848 H3BUA1 57 aa17.25■□□□□ 0.35
CHMP2A-204ENST00000597848 PRH1P02810 166 aa17.25■□□□□ 0.35
CHMP2A-204ENST00000597848 HOXA1P49639 335 aaPredicted RBP17.25■□□□□ 0.35
CHMP2A-204ENST00000597848 C19orf35Q6ZS72 473 aa17.25■□□□□ 0.35
CHMP2A-204ENST00000597848 RNF152Q8N8N0 203 aa17.25■□□□□ 0.35
CHMP2A-204ENST00000597848 OR52E5Q8NH55 327 aa17.25■□□□□ 0.35
CHMP2A-204ENST00000597848 SLA2Q9H6Q3 261 aa17.25■□□□□ 0.35
CHMP2A-204ENST00000597848 ZFP57Q9NU63 452 aa17.25■□□□□ 0.35
CHMP2A-204ENST00000597848 STAB1Q9NY15 2570 aa17.25■□□□□ 0.35
CHMP2A-204ENST00000597848 TENM1Q9UKZ4 2725 aa17.24■□□□□ 0.35
CHMP2A-204ENST00000597848 C13orf42A0A1B0GVH6 325 aa17.24■□□□□ 0.35
CHMP2A-204ENST00000597848 CEBPZOSA8MTT3 80 aa17.24■□□□□ 0.35
CHMP2A-204ENST00000597848 SNRPGP15A8MWD9 76 aa17.24■□□□□ 0.35
CHMP2A-204ENST00000597848 CRYGCP07315 174 aa17.24■□□□□ 0.35
CHMP2A-204ENST00000597848 SLC25A6P12236 298 aa17.24■□□□□ 0.35
CHMP2A-204ENST00000597848 CTRB1P17538 263 aa17.24■□□□□ 0.35
CHMP2A-204ENST00000597848 RPL23AP62750 156 aaKnown RBP17.24■□□□□ 0.35
CHMP2A-204ENST00000597848 ERHP84090 104 aaKnown RBP17.24■□□□□ 0.35
CHMP2A-204ENST00000597848 AARDQ4LEZ3 155 aa17.24■□□□□ 0.35
CHMP2A-204ENST00000597848 CTRB2Q6GPI1 263 aa17.24■□□□□ 0.35
CHMP2A-204ENST00000597848 NDUFA11Q86Y39 141 aa17.24■□□□□ 0.35
CHMP2A-204ENST00000597848 MPTX1A8MV57 137 aa17.23■□□□□ 0.35
CHMP2A-204ENST00000597848 NUDT19A8MXV4 375 aa17.23■□□□□ 0.35
CHMP2A-204ENST00000597848 FAM25EA8MYX2 175 aa17.23■□□□□ 0.35
CHMP2A-204ENST00000597848 CCSO14618 274 aa17.22■□□□□ 0.35
CHMP2A-204ENST00000597848 TNFRSF9Q07011 255 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms