RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 PLXNB1O43157 2135 aa10.68□□□□□ -0.7
VRK3-205ENST00000593919 A0A1W2PRD5 423 aa10.68□□□□□ -0.7
VRK3-205ENST00000593919 A0A1W2PRF3 423 aa10.68□□□□□ -0.7
VRK3-205ENST00000593919 A0A1W2PRM7 423 aa10.68□□□□□ -0.7
VRK3-205ENST00000593919 RBMXL2O75526 392 aaKnown RBP10.68□□□□□ -0.7
VRK3-205ENST00000593919 APOA2P02652 100 aa10.68□□□□□ -0.7
VRK3-205ENST00000593919 NQO2P16083 231 aa10.68□□□□□ -0.7
VRK3-205ENST00000593919 OR8G2PQ6IF36 304 aa10.68□□□□□ -0.7
VRK3-205ENST00000593919 SPSB3Q6PJ21 355 aa10.68□□□□□ -0.7
VRK3-205ENST00000593919 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.68□□□□□ -0.7
VRK3-205ENST00000593919 ABCA1O95477 2261 aa10.67□□□□□ -0.7
VRK3-205ENST00000593919 LY6LH3BQJ8 138 aa10.67□□□□□ -0.7
VRK3-205ENST00000593919 H7C2Y5 167 aa10.67□□□□□ -0.7
VRK3-205ENST00000593919 HTR1DP28221 377 aa10.67□□□□□ -0.7
VRK3-205ENST00000593919 SPINK9Q5DT21 86 aa10.67□□□□□ -0.7
VRK3-205ENST00000593919 RPEQ96AT9 228 aa10.67□□□□□ -0.7
VRK3-205ENST00000593919 RHOVQ96L33 236 aa10.67□□□□□ -0.7
VRK3-205ENST00000593919 RARRES2Q99969 163 aa10.67□□□□□ -0.7
VRK3-205ENST00000593919 TEX15Q9BXT5 2789 aa10.67□□□□□ -0.7
VRK3-205ENST00000593919 IGHV1-3A0A0C4DH29 117 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 MSMBP08118 114 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 OR13C7P0DN81 318 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 ERVK-16P61578 105 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 PAX8Q06710 450 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 SLC38A11Q08AI6 406 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 ETV3LQ6ZN32 361 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 LHFPL4Q7Z7J7 247 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 SFT2D1Q8WV19 159 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 LHX4Q969G2 390 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 CLUHP3Q96NS8 147 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 DPM3Q9P2X0 92 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 IGHV3-72A0A0B4J1Y9 119 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 UBE2L5PA0A1B0GUS4 154 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 OR9G9P0C7N8 305 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 HAGHQ16775 308 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 PDPNQ86YL7 162 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 KRTAP1-3Q8IUG1 177 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 LINC00518Q8N0U6 118 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 OR4C12Q96R67 309 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 TMEM140Q9NV12 185 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 WASHC3Q9Y3C0 194 aa10.66□□□□□ -0.7
VRK3-205ENST00000593919 A0A1W2PPI3 338 aa10.65□□□□□ -0.7
VRK3-205ENST00000593919 RBFOX3A6NFN3 312 aa10.65□□□□□ -0.7
VRK3-205ENST00000593919 SRRM4A7MD48 611 aaKnown RBP10.65□□□□□ -0.7
VRK3-205ENST00000593919 CEBPZOSA8MTT3 80 aa10.65□□□□□ -0.7
VRK3-205ENST00000593919 B4DSR2 109 aa10.65□□□□□ -0.7
VRK3-205ENST00000593919 RNF223E7ERA6 249 aa10.65□□□□□ -0.7
VRK3-205ENST00000593919 HRASP01112 189 aa10.65□□□□□ -0.7
VRK3-205ENST00000593919 AKR1C3P42330 323 aa10.65□□□□□ -0.7
VRK3-205ENST00000593919 RAB13P51153 203 aa10.65□□□□□ -0.7
VRK3-205ENST00000593919 OR2B8PP59922 312 aa10.65□□□□□ -0.7
VRK3-205ENST00000593919 B2MP61769 119 aa10.65□□□□□ -0.7
VRK3-205ENST00000593919 RPS16P62249 146 aaKnown RBP10.65□□□□□ -0.7
VRK3-205ENST00000593919 LRRC75BQ2VPJ9 315 aa10.65□□□□□ -0.7
VRK3-205ENST00000593919 TPTE2P1Q5T6R2 138 aa10.65□□□□□ -0.7
VRK3-205ENST00000593919 TMEM14EPQ6UXP3 125 aa10.65□□□□□ -0.7
VRK3-205ENST00000593919 MAPK1IP1LQ8NDC0 245 aa10.65□□□□□ -0.7
VRK3-205ENST00000593919 DTD1Q8TEA8 209 aa10.65□□□□□ -0.7
VRK3-205ENST00000593919 HARBI1Q96MB7 349 aa10.65□□□□□ -0.7
VRK3-205ENST00000593919 SLC35B3Q9H1N7 401 aa10.65□□□□□ -0.7
VRK3-205ENST00000593919 VSIRQ9H7M9 311 aa10.65□□□□□ -0.7
VRK3-205ENST00000593919 HILPDAQ9Y5L2 63 aa10.65□□□□□ -0.7
VRK3-205ENST00000593919 FLNAP21333 2647 aaKnown RBP10.65□□□□□ -0.7
VRK3-205ENST00000593919 A0A1B0GW64 132 aa10.65□□□□□ -0.71
VRK3-205ENST00000593919 PAX6P26367 422 aa10.65□□□□□ -0.71
VRK3-205ENST00000593919 MC5RP33032 325 aa10.65□□□□□ -0.71
VRK3-205ENST00000593919 CEACAM3P40198 252 aa10.65□□□□□ -0.71
VRK3-205ENST00000593919 UBE2E1P51965 193 aa10.65□□□□□ -0.71
VRK3-205ENST00000593919 HNF4GQ14541 408 aa10.65□□□□□ -0.71
VRK3-205ENST00000593919 POU2AF1Q16633 256 aa10.65□□□□□ -0.71
VRK3-205ENST00000593919 TMEM177Q53S58 311 aa10.65□□□□□ -0.71
VRK3-205ENST00000593919 OR4A47Q6IF82 309 aa10.65□□□□□ -0.71
VRK3-205ENST00000593919 PRSS57Q6UWY2 283 aa10.65□□□□□ -0.71
VRK3-205ENST00000593919 DPPA3Q6W0C5 159 aa10.65□□□□□ -0.71
VRK3-205ENST00000593919 MOB3BQ86TA1 216 aa10.65□□□□□ -0.71
VRK3-205ENST00000593919 OR4C13Q8NGP0 309 aa10.65□□□□□ -0.71
VRK3-205ENST00000593919 OSR1Q8TAX0 266 aaPredicted RBP10.65□□□□□ -0.71
VRK3-205ENST00000593919 FLYWCH2Q96CP2 140 aaKnown RBP10.65□□□□□ -0.71
VRK3-205ENST00000593919 QTRT1Q9BXR0 403 aaKnown RBP10.65□□□□□ -0.71
VRK3-205ENST00000593919 TLN2Q9Y4G6 2542 aa10.64□□□□□ -0.71
VRK3-205ENST00000593919 TRAV3A0A0B4J244 114 aa10.64□□□□□ -0.71
VRK3-205ENST00000593919 BTBD17A6NE02 478 aa10.64□□□□□ -0.71
VRK3-205ENST00000593919 FAM90A9PA6NNJ1 464 aa10.64□□□□□ -0.71
VRK3-205ENST00000593919 M0R036 132 aa10.64□□□□□ -0.71
VRK3-205ENST00000593919 SNRNP70P08621 437 aaKnown RBP10.64□□□□□ -0.71
VRK3-205ENST00000593919 LGALS4P56470 323 aa10.64□□□□□ -0.71
VRK3-205ENST00000593919 LOXL1Q08397 574 aaPredicted RBP10.64□□□□□ -0.71
VRK3-205ENST00000593919 AWAT1Q58HT5 328 aa10.64□□□□□ -0.71
VRK3-205ENST00000593919 C1orf159Q96HA4 380 aa10.64□□□□□ -0.71
VRK3-205ENST00000593919 Q96MF0 132 aa10.64□□□□□ -0.71
VRK3-205ENST00000593919 C20orf24Q9BUV8 137 aa10.64□□□□□ -0.71
VRK3-205ENST00000593919 WDR61Q9GZS3 305 aaKnown RBP10.64□□□□□ -0.71
VRK3-205ENST00000593919 RPS10P5Q9NQ39 176 aa10.64□□□□□ -0.71
VRK3-205ENST00000593919 KIAA1456Q9P272 454 aa10.64□□□□□ -0.71
VRK3-205ENST00000593919 TIMM23O14925 209 aa10.63□□□□□ -0.71
VRK3-205ENST00000593919 HBE1P02100 147 aa10.63□□□□□ -0.71
VRK3-205ENST00000593919 PF4P02776 101 aa10.63□□□□□ -0.71
VRK3-205ENST00000593919 SAA1P0DJI8 122 aaPredicted RBP10.63□□□□□ -0.71
VRK3-205ENST00000593919 CEBPGP53567 150 aa10.63□□□□□ -0.71
VRK3-205ENST00000593919 ELLP55199 621 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms