RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 TNFRSF9Q07011 255 aa16.81■□□□□ 0.28
R3HDM4-204ENST00000589428 WFDC12Q8WWY7 111 aa16.81■□□□□ 0.28
R3HDM4-204ENST00000589428 RCL1Q9Y2P8 373 aaKnown RBP16.81■□□□□ 0.28
R3HDM4-204ENST00000589428 K7EPK0 472 aa16.8■□□□□ 0.28
R3HDM4-204ENST00000589428 FGF2P09038 288 aa16.8■□□□□ 0.28
R3HDM4-204ENST00000589428 PLGLAQ15195 96 aa16.8■□□□□ 0.28
R3HDM4-204ENST00000589428 TMEM95Q3KNT9 176 aa16.8■□□□□ 0.28
R3HDM4-204ENST00000589428 SERTAD4Q9NUC0 356 aa16.8■□□□□ 0.28
R3HDM4-204ENST00000589428 LSM5Q9Y4Y9 91 aaKnown RBP16.8■□□□□ 0.28
R3HDM4-204ENST00000589428 OR51B2Q9Y5P1 312 aa16.8■□□□□ 0.28
R3HDM4-204ENST00000589428 FAM90A26D6RGX4 464 aa16.79■□□□□ 0.28
R3HDM4-204ENST00000589428 H0YIZ8 118 aa16.79■□□□□ 0.28
R3HDM4-204ENST00000589428 FCN1O00602 326 aa16.79■□□□□ 0.28
R3HDM4-204ENST00000589428 POLR2GP62487 172 aaKnown RBP eCLIP16.79■□□□□ 0.28
R3HDM4-204ENST00000589428 MMD2Q8IY49 270 aa16.79■□□□□ 0.28
R3HDM4-204ENST00000589428 CLCC1Q96S66 551 aa16.79■□□□□ 0.28
R3HDM4-204ENST00000589428 ZNF747Q9BV97 191 aa16.79■□□□□ 0.28
R3HDM4-204ENST00000589428 TENM1Q9UKZ4 2725 aa16.79■□□□□ 0.28
R3HDM4-204ENST00000589428 SSBP2P81877 361 aaPredicted RBP16.79■□□□□ 0.28
R3HDM4-204ENST00000589428 SPINK9Q5DT21 86 aa16.79■□□□□ 0.28
R3HDM4-204ENST00000589428 C10orf55Q5SWW7 151 aa16.79■□□□□ 0.28
R3HDM4-204ENST00000589428 SLC35E3Q7Z769 313 aa16.79■□□□□ 0.28
R3HDM4-204ENST00000589428 KLHDC1Q8N7A1 406 aa16.79■□□□□ 0.28
R3HDM4-204ENST00000589428 ZNF257Q9Y2Q1 563 aa16.79■□□□□ 0.28
R3HDM4-204ENST00000589428 SSSCA1O60232 199 aa16.78■□□□□ 0.28
R3HDM4-204ENST00000589428 IFNA17P01571 189 aa16.78■□□□□ 0.28
R3HDM4-204ENST00000589428 OPN1MWP04001 364 aa16.78■□□□□ 0.28
R3HDM4-204ENST00000589428 OPN1MW2P0DN77 364 aa16.78■□□□□ 0.28
R3HDM4-204ENST00000589428 OPN1MW3P0DN78 364 aa16.78■□□□□ 0.28
R3HDM4-204ENST00000589428 FGL1Q08830 312 aa16.78■□□□□ 0.28
R3HDM4-204ENST00000589428 PDLIM3Q53GG5 364 aaPredicted RBP16.78■□□□□ 0.28
R3HDM4-204ENST00000589428 C11orf87Q6NUJ2 197 aa16.78■□□□□ 0.28
R3HDM4-204ENST00000589428 OR52E5Q8NH55 327 aa16.78■□□□□ 0.28
R3HDM4-204ENST00000589428 FKBP11Q9NYL4 201 aa16.78■□□□□ 0.28
R3HDM4-204ENST00000589428 OR5AC2Q9NZP5 309 aa16.78■□□□□ 0.28
R3HDM4-204ENST00000589428 MBD2Q9UBB5 411 aa16.78■□□□□ 0.28
R3HDM4-204ENST00000589428 ANK2Q01484 3957 aa16.78■□□□□ 0.28
R3HDM4-204ENST00000589428 TEX50A0A1B0GTY4 177 aa16.77■□□□□ 0.28
R3HDM4-204ENST00000589428 BOLA2-SMG1P6H3BVE0 249 aa16.77■□□□□ 0.28
R3HDM4-204ENST00000589428 KCNAB3O43448 404 aa16.77■□□□□ 0.28
R3HDM4-204ENST00000589428 DEDDO75618 318 aa16.77■□□□□ 0.28
R3HDM4-204ENST00000589428 CA2P00918 260 aa16.77■□□□□ 0.28
R3HDM4-204ENST00000589428 C1QBP02746 253 aa16.77■□□□□ 0.28
R3HDM4-204ENST00000589428 SPCS3P61009 180 aa16.77■□□□□ 0.28
R3HDM4-204ENST00000589428 HSPE1P61604 102 aaKnown RBP16.77■□□□□ 0.28
R3HDM4-204ENST00000589428 OR11H4Q8NGC9 324 aa16.77■□□□□ 0.28
R3HDM4-204ENST00000589428 OR5B3Q8NH48 314 aa16.77■□□□□ 0.28
R3HDM4-204ENST00000589428 RNF126Q9BV68 326 aa16.77■□□□□ 0.28
R3HDM4-204ENST00000589428 COMMD5Q9GZQ3 224 aa16.77■□□□□ 0.28
R3HDM4-204ENST00000589428 RBKSQ9H477 322 aa16.77■□□□□ 0.28
R3HDM4-204ENST00000589428 ZFP57Q9NU63 452 aa16.77■□□□□ 0.28
R3HDM4-204ENST00000589428 SYNGR2O43760 224 aa16.76■□□□□ 0.27
R3HDM4-204ENST00000589428 IGHG2P01859 326 aa16.76■□□□□ 0.27
R3HDM4-204ENST00000589428 PET100P0DJ07 73 aa16.76■□□□□ 0.27
R3HDM4-204ENST00000589428 GNB1P62873 340 aa16.76■□□□□ 0.27
R3HDM4-204ENST00000589428 TNXAQ16473 311 aa16.76■□□□□ 0.27
R3HDM4-204ENST00000589428 ZFP69Q49AA0 526 aa16.76■□□□□ 0.27
R3HDM4-204ENST00000589428 PRSS54Q6PEW0 395 aa16.76■□□□□ 0.27
R3HDM4-204ENST00000589428 DNHD1Q96M86 4753 aa16.76■□□□□ 0.27
R3HDM4-204ENST00000589428 A0A1B0GW64 132 aa16.76■□□□□ 0.27
R3HDM4-204ENST00000589428 E7EUB6 86 aa16.76■□□□□ 0.27
R3HDM4-204ENST00000589428 WRBO00258 174 aa16.76■□□□□ 0.27
R3HDM4-204ENST00000589428 HLA-DRB1P01911 266 aa16.76■□□□□ 0.27
R3HDM4-204ENST00000589428 MAS1LP35410 378 aa16.76■□□□□ 0.27
R3HDM4-204ENST00000589428 SHISA2Q6UWI4 295 aa16.76■□□□□ 0.27
R3HDM4-204ENST00000589428 C11orf1Q9H5F2 150 aa16.76■□□□□ 0.27
R3HDM4-204ENST00000589428 CACFD1Q9UGQ2 172 aa16.76■□□□□ 0.27
R3HDM4-204ENST00000589428 CGB1A6NKQ9 187 aa16.75■□□□□ 0.27
R3HDM4-204ENST00000589428 ACTL6BO94805 426 aa16.75■□□□□ 0.27
R3HDM4-204ENST00000589428 TMEM50AO95807 157 aa16.75■□□□□ 0.27
R3HDM4-204ENST00000589428 LYL1P12980 280 aa16.75■□□□□ 0.27
R3HDM4-204ENST00000589428 PRCDQ00LT1 54 aa16.75■□□□□ 0.27
R3HDM4-204ENST00000589428 OR1L8Q8NGR8 309 aa16.75■□□□□ 0.27
R3HDM4-204ENST00000589428 THAP6Q8TBB0 222 aa16.75■□□□□ 0.27
R3HDM4-204ENST00000589428 HINT2Q9BX68 163 aa16.75■□□□□ 0.27
R3HDM4-204ENST00000589428 NDUFA4L2Q9NRX3 87 aa16.75■□□□□ 0.27
R3HDM4-204ENST00000589428 FXYD6-FXYD2A0A087WZ82 144 aa16.74■□□□□ 0.27
R3HDM4-204ENST00000589428 CEBPZOSA8MTT3 80 aa16.74■□□□□ 0.27
R3HDM4-204ENST00000589428 IAPPP10997 89 aa16.74■□□□□ 0.27
R3HDM4-204ENST00000589428 DTD1Q8TEA8 209 aa16.74■□□□□ 0.27
R3HDM4-204ENST00000589428 HSPB9Q9BQS6 159 aa16.74■□□□□ 0.27
R3HDM4-204ENST00000589428 WNT10AQ9GZT5 417 aa16.74■□□□□ 0.27
R3HDM4-204ENST00000589428 AP4M1O00189 453 aa16.73■□□□□ 0.27
R3HDM4-204ENST00000589428 MED6O75586 246 aa16.73■□□□□ 0.27
R3HDM4-204ENST00000589428 RLN2P04090 185 aa16.73■□□□□ 0.27
R3HDM4-204ENST00000589428 SLC25A4P12235 298 aa16.73■□□□□ 0.27
R3HDM4-204ENST00000589428 RPL27AP46776 148 aaKnown RBP16.73■□□□□ 0.27
R3HDM4-204ENST00000589428 HOXA1P49639 335 aaPredicted RBP16.73■□□□□ 0.27
R3HDM4-204ENST00000589428 PAX9P55771 341 aa16.73■□□□□ 0.27
R3HDM4-204ENST00000589428 CX3CL1P78423 397 aa16.73■□□□□ 0.27
R3HDM4-204ENST00000589428 NDPQ00604 133 aa16.73■□□□□ 0.27
R3HDM4-204ENST00000589428 CENPVQ7Z7K6 275 aaPredicted RBP16.73■□□□□ 0.27
R3HDM4-204ENST00000589428 NOXA1Q86UR1 476 aa16.73■□□□□ 0.27
R3HDM4-204ENST00000589428 GRPEL2Q8TAA5 225 aa16.73■□□□□ 0.27
R3HDM4-204ENST00000589428 SRSF12Q8WXF0 261 aaKnown RBP16.73■□□□□ 0.27
R3HDM4-204ENST00000589428 DCUN1D4Q92564 292 aa16.73■□□□□ 0.27
R3HDM4-204ENST00000589428 RAB40CQ96S21 281 aa16.73■□□□□ 0.27
R3HDM4-204ENST00000589428 IGHV7-81A0A0B4J1V7 117 aa16.72■□□□□ 0.27
R3HDM4-204ENST00000589428 HNRNPCP07910 306 aaKnown RBP eCLIP16.72■□□□□ 0.273e-8■■■□□ 14.9
R3HDM4-204ENST00000589428 ZNF562Q6V9R5 426 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms