RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 ARSJQ5FYB0 599 aaPredicted RBP17.92■□□□□ 0.46
ACTN4-210ENST00000588618 MRPL41Q8IXM3 137 aaKnown RBP17.92■□□□□ 0.46
ACTN4-210ENST00000588618 OR2T35Q8NGX2 323 aa17.92■□□□□ 0.46
ACTN4-210ENST00000588618 NIPBLQ6KC79 2804 aaeCLIP17.92■□□□□ 0.462e-6■■■■□ 25.1
ACTN4-210ENST00000588618 TRAV14DV4A0A0A6YYC5 116 aa17.92■□□□□ 0.46
ACTN4-210ENST00000588618 A0A1B0GW64 132 aa17.92■□□□□ 0.46
ACTN4-210ENST00000588618 CGB1A6NKQ9 187 aa17.92■□□□□ 0.46
ACTN4-210ENST00000588618 KCNAB3O43448 404 aa17.92■□□□□ 0.46
ACTN4-210ENST00000588618 CRYBA1P05813 215 aa17.92■□□□□ 0.46
ACTN4-210ENST00000588618 PSMB6P28072 239 aa17.92■□□□□ 0.46
ACTN4-210ENST00000588618 PRCDQ00LT1 54 aa17.92■□□□□ 0.46
ACTN4-210ENST00000588618 HSPB9Q9BQS6 159 aa17.92■□□□□ 0.46
ACTN4-210ENST00000588618 PRSS22Q9GZN4 317 aa17.92■□□□□ 0.46
ACTN4-210ENST00000588618 PARP11Q9NR21 331 aa17.92■□□□□ 0.46
ACTN4-210ENST00000588618 A0A1W2PN81 502 aa17.91■□□□□ 0.46
ACTN4-210ENST00000588618 H0YIZ8 118 aa17.91■□□□□ 0.46
ACTN4-210ENST00000588618 SYNGR2O43760 224 aa17.91■□□□□ 0.46
ACTN4-210ENST00000588618 SSSCA1O60232 199 aa17.91■□□□□ 0.46
ACTN4-210ENST00000588618 RNASE1P07998 156 aaKnown RBP17.91■□□□□ 0.46
ACTN4-210ENST00000588618 PVALBP20472 110 aaPredicted RBP17.91■□□□□ 0.46
ACTN4-210ENST00000588618 CHRNA7P36544 502 aa17.91■□□□□ 0.46
ACTN4-210ENST00000588618 POLR2GP62487 172 aaKnown RBP eCLIP17.91■□□□□ 0.46
ACTN4-210ENST00000588618 RBKSQ9H477 322 aa17.91■□□□□ 0.46
ACTN4-210ENST00000588618 NDUFA4L2Q9NRX3 87 aa17.91■□□□□ 0.46
ACTN4-210ENST00000588618 RCL1Q9Y2P8 373 aaKnown RBP17.91■□□□□ 0.46
ACTN4-210ENST00000588618 FAM181BA6NEQ2 426 aa17.9■□□□□ 0.46
ACTN4-210ENST00000588618 K7EPK0 472 aa17.9■□□□□ 0.46
ACTN4-210ENST00000588618 UBA52P62987 128 aaKnown RBP17.9■□□□□ 0.46
ACTN4-210ENST00000588618 SLC35E3Q7Z769 313 aa17.9■□□□□ 0.46
ACTN4-210ENST00000588618 DTD1Q8TEA8 209 aa17.9■□□□□ 0.46
ACTN4-210ENST00000588618 FAM103A1Q9BTL3 118 aaKnown RBP17.9■□□□□ 0.46
ACTN4-210ENST00000588618 HIPK2Q9H2X6 1198 aa17.9■□□□□ 0.46
ACTN4-210ENST00000588618 MSGN1A6NI15 193 aa17.89■□□□□ 0.46
ACTN4-210ENST00000588618 L7N2F9 121 aa17.89■□□□□ 0.46
ACTN4-210ENST00000588618 MPC2O95563 127 aa17.89■□□□□ 0.46
ACTN4-210ENST00000588618 VAMP2P63027 116 aa17.89■□□□□ 0.46
ACTN4-210ENST00000588618 NDPQ00604 133 aa17.89■□□□□ 0.46
ACTN4-210ENST00000588618 PDLIM3Q53GG5 364 aaPredicted RBP17.89■□□□□ 0.46
ACTN4-210ENST00000588618 TCTE3Q8IZS6 198 aa17.89■□□□□ 0.46
ACTN4-210ENST00000588618 CIB3Q96Q77 187 aaPredicted RBP17.89■□□□□ 0.46
ACTN4-210ENST00000588618 RPL15P61313 204 aaKnown RBP17.89■□□□□ 0.45
ACTN4-210ENST00000588618 THAP6Q8TBB0 222 aa17.89■□□□□ 0.45
ACTN4-210ENST00000588618 HEYLQ9NQ87 328 aaPredicted RBP17.89■□□□□ 0.45
ACTN4-210ENST00000588618 OR5AC2Q9NZP5 309 aa17.89■□□□□ 0.45
ACTN4-210ENST00000588618 IGHG2P01859 326 aa17.88■□□□□ 0.45
ACTN4-210ENST00000588618 ERHP84090 104 aaKnown RBP17.88■□□□□ 0.45
ACTN4-210ENST00000588618 HSD17B13Q7Z5P4 300 aaPredicted RBP17.88■□□□□ 0.45
ACTN4-210ENST00000588618 RAB40CQ96S21 281 aa17.88■□□□□ 0.45
ACTN4-210ENST00000588618 RNF126Q9BV68 326 aa17.88■□□□□ 0.45
ACTN4-210ENST00000588618 C11orf1Q9H5F2 150 aa17.88■□□□□ 0.45
ACTN4-210ENST00000588618 ATP6V0E1O15342 81 aa17.87■□□□□ 0.45
ACTN4-210ENST00000588618 LY86O95711 162 aa17.87■□□□□ 0.45
ACTN4-210ENST00000588618 TMEM50AO95807 157 aa17.87■□□□□ 0.45
ACTN4-210ENST00000588618 APELAP0DMC3 54 aa17.87■□□□□ 0.45
ACTN4-210ENST00000588618 IAPPP10997 89 aa17.87■□□□□ 0.45
ACTN4-210ENST00000588618 Q6ZS46 218 aa17.87■□□□□ 0.45
ACTN4-210ENST00000588618 OR10W1Q8NGF6 305 aa17.87■□□□□ 0.45
ACTN4-210ENST00000588618 SRSF8Q9BRL6 282 aaKnown RBP17.87■□□□□ 0.45
ACTN4-210ENST00000588618 DEDDO75618 318 aa17.86■□□□□ 0.45
ACTN4-210ENST00000588618 TMEM267Q0VDI3 215 aaPredicted RBP17.86■□□□□ 0.45
ACTN4-210ENST00000588618 OR11H4Q8NGC9 324 aa17.86■□□□□ 0.45
ACTN4-210ENST00000588618 SGMS2Q8NHU3 365 aa17.86■□□□□ 0.45
ACTN4-210ENST00000588618 FBXO7Q9Y3I1 522 aa17.86■□□□□ 0.45
ACTN4-210ENST00000588618 LINC01548A6NM66 108 aa17.86■□□□□ 0.45
ACTN4-210ENST00000588618 OR13C7P0DN81 318 aa17.86■□□□□ 0.45
ACTN4-210ENST00000588618 SNCAP37840 140 aa17.86■□□□□ 0.45
ACTN4-210ENST00000588618 ECSCRQ19T08 205 aa17.86■□□□□ 0.45
ACTN4-210ENST00000588618 LFNGQ8NES3 379 aa17.86■□□□□ 0.45
ACTN4-210ENST00000588618 MBD2Q9UBB5 411 aa17.86■□□□□ 0.45
ACTN4-210ENST00000588618 AP4M1O00189 453 aa17.85■□□□□ 0.45
ACTN4-210ENST00000588618 PAX9P55771 341 aa17.85■□□□□ 0.45
ACTN4-210ENST00000588618 RPL23AP62750 156 aaKnown RBP17.85■□□□□ 0.45
ACTN4-210ENST00000588618 RPP30P78346 268 aaKnown RBP17.85■□□□□ 0.45
ACTN4-210ENST00000588618 TEX22C9J3V5 150 aa17.84■□□□□ 0.45
ACTN4-210ENST00000588618 E5RGE8 158 aa17.84■□□□□ 0.45
ACTN4-210ENST00000588618 VDAC2P45880 294 aaPredicted RBP17.84■□□□□ 0.45
ACTN4-210ENST00000588618 PRSS54Q6PEW0 395 aa17.84■□□□□ 0.45
ACTN4-210ENST00000588618 UNQ5815/PRO19632Q6UWF5 114 aa17.84■□□□□ 0.45
ACTN4-210ENST00000588618 TMEM68Q96MH6 324 aa17.84■□□□□ 0.45
ACTN4-210ENST00000588618 PSENENQ9NZ42 101 aa17.84■□□□□ 0.45
ACTN4-210ENST00000588618 WSB1Q9Y6I7 421 aa17.84■□□□□ 0.45
ACTN4-210ENST00000588618 IFNA10P01566 189 aa17.84■□□□□ 0.45
ACTN4-210ENST00000588618 EGR2P11161 476 aaPredicted RBP17.84■□□□□ 0.45
ACTN4-210ENST00000588618 OR2T6Q8NHC8 308 aa17.84■□□□□ 0.45
ACTN4-210ENST00000588618 DCUN1D4Q92564 292 aa17.84■□□□□ 0.45
ACTN4-210ENST00000588618 ZNF702PQ9H963 129 aa17.84■□□□□ 0.45
ACTN4-210ENST00000588618 PAIP2BQ9ULR5 123 aaKnown RBP17.84■□□□□ 0.45
ACTN4-210ENST00000588618 U3KQ87 197 aa17.84■□□□□ 0.45
ACTN4-210ENST00000588618 IGLC7A0M8Q6 106 aa17.83■□□□□ 0.44
ACTN4-210ENST00000588618 IGF1P05019 195 aa17.83■□□□□ 0.44
ACTN4-210ENST00000588618 AREGP15514 252 aa17.83■□□□□ 0.44
ACTN4-210ENST00000588618 HTR2BP41595 481 aa17.83■□□□□ 0.44
ACTN4-210ENST00000588618 CAV2P51636 162 aa17.83■□□□□ 0.44
ACTN4-210ENST00000588618 SUB1P53999 127 aaKnown RBP eCLIP17.83■□□□□ 0.443e-6■□□□□ 8.1
ACTN4-210ENST00000588618 WT1-ASQ06250 92 aa17.83■□□□□ 0.44
ACTN4-210ENST00000588618 SPANXN5Q5MJ07 72 aa17.83■□□□□ 0.44
ACTN4-210ENST00000588618 FXYD6-FXYD2A0A087WZ82 144 aa17.82■□□□□ 0.44
ACTN4-210ENST00000588618 TRAV41A0A0B4J266 112 aa17.82■□□□□ 0.44
ACTN4-210ENST00000588618 INS-IGF2F8WCM5 200 aa17.82■□□□□ 0.44
ACTN4-210ENST00000588618 H3BP45 60 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms