RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 TNFRSF9Q07011 255 aa14.36□□□□□ -0.11
H3F3B-206ENST00000587560 TMEM95Q3KNT9 176 aa14.36□□□□□ -0.11
H3F3B-206ENST00000587560 THOC7Q6I9Y2 204 aaKnown RBP14.36□□□□□ -0.11
H3F3B-206ENST00000587560 GSG1LQ6UXU4 331 aa14.36□□□□□ -0.11
H3F3B-206ENST00000587560 WDR89Q96FK6 387 aaPredicted RBP14.36□□□□□ -0.11
H3F3B-206ENST00000587560 FYTTD1Q96QD9 318 aaKnown RBP14.36□□□□□ -0.11
H3F3B-206ENST00000587560 WNT10AQ9GZT5 417 aa14.36□□□□□ -0.11
H3F3B-206ENST00000587560 HMX3A6NHT5 357 aa14.35□□□□□ -0.11
H3F3B-206ENST00000587560 MSGN1A6NI15 193 aa14.35□□□□□ -0.11
H3F3B-206ENST00000587560 AP4M1O00189 453 aa14.35□□□□□ -0.11
H3F3B-206ENST00000587560 CNIH1O95406 144 aa14.35□□□□□ -0.11
H3F3B-206ENST00000587560 TRAPPC2P0DI81 140 aa14.35□□□□□ -0.11
H3F3B-206ENST00000587560 TRAPPC2BP0DI82 140 aa14.35□□□□□ -0.11
H3F3B-206ENST00000587560 VDAC2P45880 294 aaPredicted RBP14.35□□□□□ -0.11
H3F3B-206ENST00000587560 GNB1P62873 340 aa14.35□□□□□ -0.11
H3F3B-206ENST00000587560 KLK9Q2XQG4 91 aa14.35□□□□□ -0.11
H3F3B-206ENST00000587560 KRTAP24-1Q3LI83 254 aa14.35□□□□□ -0.11
H3F3B-206ENST00000587560 C9orf152Q5JTZ5 239 aa14.35□□□□□ -0.11
H3F3B-206ENST00000587560 FAM103A1Q9BTL3 118 aaKnown RBP14.35□□□□□ -0.11
H3F3B-206ENST00000587560 NMES1Q9C002 83 aa14.35□□□□□ -0.11
H3F3B-206ENST00000587560 KLK9Q9UKQ9 250 aa14.35□□□□□ -0.11
H3F3B-206ENST00000587560 C13orf42A0A1B0GVH6 325 aa14.34□□□□□ -0.11
H3F3B-206ENST00000587560 C5orf51A6NDU8 294 aa14.34□□□□□ -0.11
H3F3B-206ENST00000587560 ACTL6BO94805 426 aa14.34□□□□□ -0.11
H3F3B-206ENST00000587560 OPN1MWP04001 364 aa14.34□□□□□ -0.11
H3F3B-206ENST00000587560 CRYBA1P05813 215 aa14.34□□□□□ -0.11
H3F3B-206ENST00000587560 OPN1MW2P0DN77 364 aa14.34□□□□□ -0.11
H3F3B-206ENST00000587560 OPN1MW3P0DN78 364 aa14.34□□□□□ -0.11
H3F3B-206ENST00000587560 PPIFP30405 207 aaKnown RBP14.34□□□□□ -0.11
H3F3B-206ENST00000587560 WT1-ASQ06250 92 aa14.34□□□□□ -0.11
H3F3B-206ENST00000587560 AKIRIN2Q53H80 203 aa14.34□□□□□ -0.11
H3F3B-206ENST00000587560 STPG2Q8N412 459 aa14.34□□□□□ -0.11
H3F3B-206ENST00000587560 OR10W1Q8NGF6 305 aa14.34□□□□□ -0.11
H3F3B-206ENST00000587560 OR1S1Q8NH92 325 aa14.34□□□□□ -0.11
H3F3B-206ENST00000587560 LINC01006Q8NI28 216 aa14.34□□□□□ -0.11
H3F3B-206ENST00000587560 GRPEL2Q8TAA5 225 aa14.34□□□□□ -0.11
H3F3B-206ENST00000587560 TMEM68Q96MH6 324 aa14.34□□□□□ -0.11
H3F3B-206ENST00000587560 C11orf1Q9H5F2 150 aa14.34□□□□□ -0.11
H3F3B-206ENST00000587560 PARP11Q9NR21 331 aa14.34□□□□□ -0.11
H3F3B-206ENST00000587560 MBPP02686 304 aaPredicted RBP14.33□□□□□ -0.12
H3F3B-206ENST00000587560 CRYGCP07315 174 aa14.33□□□□□ -0.12
H3F3B-206ENST00000587560 BSXQ3C1V8 233 aa14.33□□□□□ -0.12
H3F3B-206ENST00000587560 PVRIGQ6DKI7 326 aa14.33□□□□□ -0.12
H3F3B-206ENST00000587560 HIST2H2BDQ6DRA6 164 aa14.33□□□□□ -0.12
H3F3B-206ENST00000587560 TTC9CQ8N5M4 171 aa14.33□□□□□ -0.12
H3F3B-206ENST00000587560 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.33□□□□□ -0.12
H3F3B-206ENST00000587560 LFNGQ8NES3 379 aa14.33□□□□□ -0.12
H3F3B-206ENST00000587560 NOL4LQ96MY1 436 aaPredicted RBP14.33□□□□□ -0.12
H3F3B-206ENST00000587560 FAM25EA8MYX2 175 aa14.32□□□□□ -0.12
H3F3B-206ENST00000587560 G3V318 75 aa14.32□□□□□ -0.12
H3F3B-206ENST00000587560 RBMXL2O75526 392 aaKnown RBP14.32□□□□□ -0.12
H3F3B-206ENST00000587560 BRI3O95415 125 aa14.32□□□□□ -0.12
H3F3B-206ENST00000587560 AREGP15514 252 aa14.32□□□□□ -0.12
H3F3B-206ENST00000587560 NKX2-1P43699 371 aaPredicted RBP14.32□□□□□ -0.12
H3F3B-206ENST00000587560 C11orf87Q6NUJ2 197 aa14.32□□□□□ -0.12
H3F3B-206ENST00000587560 HSD17B13Q7Z5P4 300 aaPredicted RBP14.32□□□□□ -0.12
H3F3B-206ENST00000587560 OR2C3Q8N628 320 aa14.32□□□□□ -0.12
H3F3B-206ENST00000587560 OR2T6Q8NHC8 308 aa14.32□□□□□ -0.12
H3F3B-206ENST00000587560 ASB13Q8WXK3 278 aa14.32□□□□□ -0.12
H3F3B-206ENST00000587560 ZNF436Q9C0F3 470 aaPredicted RBP14.32□□□□□ -0.12
H3F3B-206ENST00000587560 RBKSQ9H477 322 aa14.32□□□□□ -0.12
H3F3B-206ENST00000587560 RCL1Q9Y2P8 373 aaKnown RBP14.32□□□□□ -0.12
H3F3B-206ENST00000587560 TRAV41A0A0B4J266 112 aa14.31□□□□□ -0.12
H3F3B-206ENST00000587560 A0A1W2PN81 502 aa14.31□□□□□ -0.12
H3F3B-206ENST00000587560 NPIPB5A8MRT5 1133 aa14.31□□□□□ -0.12
H3F3B-206ENST00000587560 SOX15O60248 233 aa14.31□□□□□ -0.12
H3F3B-206ENST00000587560 IFNA17P01571 189 aa14.31□□□□□ -0.12
H3F3B-206ENST00000587560 CTRB1P17538 263 aa14.31□□□□□ -0.12
H3F3B-206ENST00000587560 CHRNA7P36544 502 aa14.31□□□□□ -0.12
H3F3B-206ENST00000587560 CYCSP99999 105 aaKnown RBP14.31□□□□□ -0.12
H3F3B-206ENST00000587560 SPINK9Q5DT21 86 aa14.31□□□□□ -0.12
H3F3B-206ENST00000587560 CTRB2Q6GPI1 263 aa14.31□□□□□ -0.12
H3F3B-206ENST00000587560 ZNF114Q8NC26 417 aa14.31□□□□□ -0.12
H3F3B-206ENST00000587560 OR4F5Q8NH21 305 aa14.31□□□□□ -0.12
H3F3B-206ENST00000587560 FAM110DQ8TAY7 271 aaPredicted RBP14.31□□□□□ -0.12
H3F3B-206ENST00000587560 GSKIPQ9P0R6 139 aa14.31□□□□□ -0.12
H3F3B-206ENST00000587560 LINC00527Q9UJ94 153 aa14.31□□□□□ -0.12
H3F3B-206ENST00000587560 WSB1Q9Y6I7 421 aa14.31□□□□□ -0.12
H3F3B-206ENST00000587560 TMEM89A2RUT3 159 aa14.3□□□□□ -0.12
H3F3B-206ENST00000587560 K7EPK0 472 aa14.3□□□□□ -0.12
H3F3B-206ENST00000587560 SYNGR2O43760 224 aa14.3□□□□□ -0.12
H3F3B-206ENST00000587560 NXPH3O95157 252 aa14.3□□□□□ -0.12
H3F3B-206ENST00000587560 TMEM50AO95807 157 aa14.3□□□□□ -0.12
H3F3B-206ENST00000587560 IGLV1-40P01703 118 aa14.3□□□□□ -0.12
H3F3B-206ENST00000587560 GIPP09681 153 aaPredicted RBP14.3□□□□□ -0.12
H3F3B-206ENST00000587560 PSMB6P28072 239 aa14.3□□□□□ -0.12
H3F3B-206ENST00000587560 BCAP31P51572 246 aa14.3□□□□□ -0.12
H3F3B-206ENST00000587560 PAX9P55771 341 aa14.3□□□□□ -0.12
H3F3B-206ENST00000587560 PROK1P58294 105 aa14.3□□□□□ -0.12
H3F3B-206ENST00000587560 POLR2GP62487 172 aaKnown RBP eCLIP14.3□□□□□ -0.12
H3F3B-206ENST00000587560 TMEM267Q0VDI3 215 aaPredicted RBP14.3□□□□□ -0.12
H3F3B-206ENST00000587560 RAB32Q13637 225 aa14.3□□□□□ -0.12
H3F3B-206ENST00000587560 UNQ5815/PRO19632Q6UWF5 114 aa14.3□□□□□ -0.12
H3F3B-206ENST00000587560 PDCD10Q9BUL8 212 aa14.3□□□□□ -0.12
H3F3B-206ENST00000587560 PLEKHA3Q9HB20 300 aa14.3□□□□□ -0.12
H3F3B-206ENST00000587560 DMRT1Q9Y5R6 373 aa14.3□□□□□ -0.12
H3F3B-206ENST00000587560 CLPSL1A2RUU4 121 aa14.29□□□□□ -0.12
H3F3B-206ENST00000587560 G3V3Q6 166 aa14.29□□□□□ -0.12
H3F3B-206ENST00000587560 FBXO24O75426 580 aa14.29□□□□□ -0.12
H3F3B-206ENST00000587560 MED6O75586 246 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms