RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 IFNA17P01571 189 aa12.68□□□□□ -0.38
ATG4D-205ENST00000586477 CHRNA7P36544 502 aa12.68□□□□□ -0.38
ATG4D-205ENST00000586477 OR2B8PP59922 312 aa12.68□□□□□ -0.38
ATG4D-205ENST00000586477 SPCS3P61009 180 aa12.68□□□□□ -0.38
ATG4D-205ENST00000586477 HSPE1P61604 102 aaKnown RBP12.68□□□□□ -0.38
ATG4D-205ENST00000586477 PJVKQ0ZLH3 352 aa12.68□□□□□ -0.38
ATG4D-205ENST00000586477 GRPEL2Q8TAA5 225 aa12.68□□□□□ -0.38
ATG4D-205ENST00000586477 ASB13Q8WXK3 278 aa12.68□□□□□ -0.38
ATG4D-205ENST00000586477 RBMXL1Q96E39 390 aaKnown RBP12.68□□□□□ -0.38
ATG4D-205ENST00000586477 ENY2Q9NPA8 101 aa12.68□□□□□ -0.38
ATG4D-205ENST00000586477 PARP11Q9NR21 331 aa12.68□□□□□ -0.38
ATG4D-205ENST00000586477 C13orf42A0A1B0GVH6 325 aa12.67□□□□□ -0.38
ATG4D-205ENST00000586477 FAM25EA8MYX2 175 aa12.67□□□□□ -0.38
ATG4D-205ENST00000586477 TRAPPC2P0DI81 140 aa12.67□□□□□ -0.38
ATG4D-205ENST00000586477 TRAPPC2BP0DI82 140 aa12.67□□□□□ -0.38
ATG4D-205ENST00000586477 CRIP2P52943 208 aaPredicted RBP12.67□□□□□ -0.38
ATG4D-205ENST00000586477 SLC35B1P78383 322 aa12.67□□□□□ -0.38
ATG4D-205ENST00000586477 IAH1Q2TAA2 248 aaPredicted RBP12.67□□□□□ -0.38
ATG4D-205ENST00000586477 TMEM95Q3KNT9 176 aa12.67□□□□□ -0.38
ATG4D-205ENST00000586477 AKIRIN2Q53H80 203 aa12.67□□□□□ -0.38
ATG4D-205ENST00000586477 C11orf44Q8N8P7 122 aa12.67□□□□□ -0.38
ATG4D-205ENST00000586477 OR5M8Q8NGP6 311 aa12.67□□□□□ -0.38
ATG4D-205ENST00000586477 HSPB9Q9BQS6 159 aa12.67□□□□□ -0.38
ATG4D-205ENST00000586477 PLEKHA3Q9HB20 300 aa12.67□□□□□ -0.38
ATG4D-205ENST00000586477 NSG2Q9Y328 171 aa12.67□□□□□ -0.38
ATG4D-205ENST00000586477 TRAV3A0A0B4J244 114 aa12.66□□□□□ -0.38
ATG4D-205ENST00000586477 A0A0G2JRQ6 117 aa12.66□□□□□ -0.38
ATG4D-205ENST00000586477 GOSR2O14653 212 aa12.66□□□□□ -0.38
ATG4D-205ENST00000586477 ATP6V0E1O15342 81 aa12.66□□□□□ -0.38
ATG4D-205ENST00000586477 ST8SIA3O43173 380 aa12.66□□□□□ -0.38
ATG4D-205ENST00000586477 PRCDQ00LT1 54 aa12.66□□□□□ -0.38
ATG4D-205ENST00000586477 MRGPRG-AS1Q2M3A8 158 aa12.66□□□□□ -0.38
ATG4D-205ENST00000586477 C2orf50Q96LR7 162 aa12.66□□□□□ -0.38
ATG4D-205ENST00000586477 FYTTD1Q96QD9 318 aaKnown RBP12.66□□□□□ -0.38
ATG4D-205ENST00000586477 WNT10AQ9GZT5 417 aa12.66□□□□□ -0.38
ATG4D-205ENST00000586477 HSPB7Q9UBY9 170 aa12.66□□□□□ -0.38
ATG4D-205ENST00000586477 TRAV41A0A0B4J266 112 aa12.65□□□□□ -0.38
ATG4D-205ENST00000586477 TEX50A0A1B0GTY4 177 aa12.65□□□□□ -0.38
ATG4D-205ENST00000586477 MSGN1A6NI15 193 aa12.65□□□□□ -0.38
ATG4D-205ENST00000586477 WRBO00258 174 aa12.65□□□□□ -0.38
ATG4D-205ENST00000586477 PITX3O75364 302 aa12.65□□□□□ -0.38
ATG4D-205ENST00000586477 NKX2-1P43699 371 aaPredicted RBP12.65□□□□□ -0.38
ATG4D-205ENST00000586477 RRAS2P62070 204 aaPredicted RBP12.65□□□□□ -0.38
ATG4D-205ENST00000586477 ERHP84090 104 aaKnown RBP12.65□□□□□ -0.38
ATG4D-205ENST00000586477 TNFRSF9Q07011 255 aa12.65□□□□□ -0.38
ATG4D-205ENST00000586477 Q6ZNX1 250 aa12.65□□□□□ -0.38
ATG4D-205ENST00000586477 Q6ZRM9 215 aa12.65□□□□□ -0.38
ATG4D-205ENST00000586477 STPG2Q8N412 459 aa12.65□□□□□ -0.38
ATG4D-205ENST00000586477 COMMD1Q8N668 190 aa12.65□□□□□ -0.38
ATG4D-205ENST00000586477 OR1L6Q8NGR2 347 aa12.65□□□□□ -0.38
ATG4D-205ENST00000586477 CIB3Q96Q77 187 aaPredicted RBP12.65□□□□□ -0.38
ATG4D-205ENST00000586477 HINT2Q9BX68 163 aa12.65□□□□□ -0.38
ATG4D-205ENST00000586477 NDUFA4L2Q9NRX3 87 aa12.65□□□□□ -0.38
ATG4D-205ENST00000586477 MGAT4CQ9UBM8 478 aa12.65□□□□□ -0.38
ATG4D-205ENST00000586477 PLXNB1O43157 2135 aa12.64□□□□□ -0.39
ATG4D-205ENST00000586477 SH2D7A6NKC9 451 aaPredicted RBP12.64□□□□□ -0.39
ATG4D-205ENST00000586477 CEBPZOSA8MTT3 80 aa12.64□□□□□ -0.39
ATG4D-205ENST00000586477 INS-IGF2F8WCM5 200 aa12.64□□□□□ -0.39
ATG4D-205ENST00000586477 HOXA1P49639 335 aaPredicted RBP12.64□□□□□ -0.39
ATG4D-205ENST00000586477 IZUMO4Q1ZYL8 232 aa12.64□□□□□ -0.39
ATG4D-205ENST00000586477 UNQ5815/PRO19632Q6UWF5 114 aa12.64□□□□□ -0.39
ATG4D-205ENST00000586477 NOXA1Q86UR1 476 aa12.64□□□□□ -0.39
ATG4D-205ENST00000586477 ZBTB8BQ8NAP8 495 aaPredicted RBP12.64□□□□□ -0.39
ATG4D-205ENST00000586477 NMES1Q9C002 83 aa12.64□□□□□ -0.39
ATG4D-205ENST00000586477 HIPK2Q9H2X6 1198 aa12.64□□□□□ -0.39
ATG4D-205ENST00000586477 GSKIPQ9P0R6 139 aa12.64□□□□□ -0.39
ATG4D-205ENST00000586477 NPIPB5A8MRT5 1133 aa12.63□□□□□ -0.39
ATG4D-205ENST00000586477 ADARB2-AS1A8MUL3 147 aa12.63□□□□□ -0.39
ATG4D-205ENST00000586477 H3BUA1 57 aa12.63□□□□□ -0.39
ATG4D-205ENST00000586477 CCSO14618 274 aa12.63□□□□□ -0.39
ATG4D-205ENST00000586477 OPN1MWP04001 364 aa12.63□□□□□ -0.39
ATG4D-205ENST00000586477 PET100P0DJ07 73 aa12.63□□□□□ -0.39
ATG4D-205ENST00000586477 OPN1MW2P0DN77 364 aa12.63□□□□□ -0.39
ATG4D-205ENST00000586477 OPN1MW3P0DN78 364 aa12.63□□□□□ -0.39
ATG4D-205ENST00000586477 CD28P10747 220 aa12.63□□□□□ -0.39
ATG4D-205ENST00000586477 SUB1P53999 127 aaKnown RBP eCLIP12.63□□□□□ -0.39
ATG4D-205ENST00000586477 ATP5IP56385 69 aaPredicted RBP12.63□□□□□ -0.39
ATG4D-205ENST00000586477 SSBP2P81877 361 aaPredicted RBP12.63□□□□□ -0.39
ATG4D-205ENST00000586477 NDPQ00604 133 aa12.63□□□□□ -0.39
ATG4D-205ENST00000586477 ECSCRQ19T08 205 aa12.63□□□□□ -0.39
ATG4D-205ENST00000586477 C10orf55Q5SWW7 151 aa12.63□□□□□ -0.39
ATG4D-205ENST00000586477 CENPVQ7Z7K6 275 aaPredicted RBP12.63□□□□□ -0.39
ATG4D-205ENST00000586477 LFNGQ8NES3 379 aa12.63□□□□□ -0.39
ATG4D-205ENST00000586477 FAM110DQ8TAY7 271 aaPredicted RBP12.63□□□□□ -0.39
ATG4D-205ENST00000586477 OR10C1Q96KK4 312 aa12.63□□□□□ -0.39
ATG4D-205ENST00000586477 PSMB11A5LHX3 300 aa12.62□□□□□ -0.39
ATG4D-205ENST00000586477 PVALBP20472 110 aaPredicted RBP12.62□□□□□ -0.39
ATG4D-205ENST00000586477 SNCAP37840 140 aa12.62□□□□□ -0.39
ATG4D-205ENST00000586477 RPP30P78346 268 aaKnown RBP12.62□□□□□ -0.39
ATG4D-205ENST00000586477 C2orf68Q2NKX9 166 aa12.62□□□□□ -0.39
ATG4D-205ENST00000586477 OR4D5Q8NGN0 318 aa12.62□□□□□ -0.39
ATG4D-205ENST00000586477 FAM103A1Q9BTL3 118 aaKnown RBP12.62□□□□□ -0.39
ATG4D-205ENST00000586477 HEYLQ9NQ87 328 aaPredicted RBP12.62□□□□□ -0.39
ATG4D-205ENST00000586477 NOTCH3Q9UM47 2321 aa12.61□□□□□ -0.39
ATG4D-205ENST00000586477 MPTX1A8MV57 137 aa12.61□□□□□ -0.39
ATG4D-205ENST00000586477 TEX22C9J3V5 150 aa12.61□□□□□ -0.39
ATG4D-205ENST00000586477 SYNGR2O43760 224 aa12.61□□□□□ -0.39
ATG4D-205ENST00000586477 BRI3O95415 125 aa12.61□□□□□ -0.39
ATG4D-205ENST00000586477 RLN2P04090 185 aa12.61□□□□□ -0.39
ATG4D-205ENST00000586477 OR13C7P0DN81 318 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms