RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 SULT1A1P50225 295 aa10.12□□□□□ -0.79
VMP1-202ENST00000585847 CAV2P51636 162 aa10.12□□□□□ -0.79
VMP1-202ENST00000585847 F2RL1P55085 397 aa10.12□□□□□ -0.79
VMP1-202ENST00000585847 PRCDQ00LT1 54 aa10.12□□□□□ -0.79
VMP1-202ENST00000585847 KRTAP24-1Q3LI83 254 aa10.12□□□□□ -0.79
VMP1-202ENST00000585847 FBLN7Q53RD9 439 aa10.12□□□□□ -0.79
VMP1-202ENST00000585847 CXorf66Q5JRM2 361 aaPredicted RBP10.12□□□□□ -0.79
VMP1-202ENST00000585847 Q6ZRM9 215 aa10.12□□□□□ -0.79
VMP1-202ENST00000585847 NPBQ8NG41 125 aa10.12□□□□□ -0.79
VMP1-202ENST00000585847 OR1L8Q8NGR8 309 aa10.12□□□□□ -0.79
VMP1-202ENST00000585847 CFHR4Q92496 578 aa10.12□□□□□ -0.79
VMP1-202ENST00000585847 PINX1Q96BK5 328 aaKnown RBP10.12□□□□□ -0.79
VMP1-202ENST00000585847 GGACTQ9BVM4 153 aa10.12□□□□□ -0.79
VMP1-202ENST00000585847 C19orf24Q9BVV8 132 aa10.12□□□□□ -0.79
VMP1-202ENST00000585847 ESM1Q9NQ30 184 aa10.12□□□□□ -0.79
VMP1-202ENST00000585847 U3KQ87 197 aa10.12□□□□□ -0.79
VMP1-202ENST00000585847 ACTL6BO94805 426 aa10.11□□□□□ -0.79
VMP1-202ENST00000585847 FBP1P09467 338 aa10.11□□□□□ -0.79
VMP1-202ENST00000585847 HKR1P10072 659 aa10.11□□□□□ -0.79
VMP1-202ENST00000585847 ATP6V1FQ16864 119 aa10.11□□□□□ -0.79
VMP1-202ENST00000585847 SIGLECL1Q8N7X8 197 aa10.11□□□□□ -0.79
VMP1-202ENST00000585847 LRRC20Q8TCA0 184 aa10.11□□□□□ -0.79
VMP1-202ENST00000585847 PIFOQ8TCI5 191 aa10.11□□□□□ -0.79
VMP1-202ENST00000585847 PLEKHA3Q9HB20 300 aa10.11□□□□□ -0.79
VMP1-202ENST00000585847 PITPNC1Q9UKF7 332 aa10.11□□□□□ -0.79
VMP1-202ENST00000585847 STRAPQ9Y3F4 350 aaKnown RBP10.11□□□□□ -0.79
VMP1-202ENST00000585847 CEBPZOSA8MTT3 80 aa10.1□□□□□ -0.79
VMP1-202ENST00000585847 M0QZK8 103 aa10.1□□□□□ -0.79
VMP1-202ENST00000585847 NBR2O15453 112 aa10.1□□□□□ -0.79
VMP1-202ENST00000585847 NDUFA3O95167 84 aa10.1□□□□□ -0.79
VMP1-202ENST00000585847 SNRNP70P08621 437 aaKnown RBP10.1□□□□□ -0.79
VMP1-202ENST00000585847 OR9G9P0C7N8 305 aa10.1□□□□□ -0.79
VMP1-202ENST00000585847 RAB11AP62491 216 aa10.1□□□□□ -0.79
VMP1-202ENST00000585847 EWSR1Q01844 656 aaKnown RBP eCLIP10.1□□□□□ -0.79
VMP1-202ENST00000585847 SCGB2A2Q13296 93 aa10.1□□□□□ -0.79
VMP1-202ENST00000585847 TMEM14EPQ6UXP3 125 aa10.1□□□□□ -0.79
VMP1-202ENST00000585847 Q6YL49 198 aa10.1□□□□□ -0.79
VMP1-202ENST00000585847 C16orf82Q7Z2V1 217 aa10.1□□□□□ -0.79
VMP1-202ENST00000585847 TMEM252Q8N6L7 170 aa10.1□□□□□ -0.79
VMP1-202ENST00000585847 UBAC2Q8NBM4 344 aa10.1□□□□□ -0.79
VMP1-202ENST00000585847 OR1L6Q8NGR2 347 aa10.1□□□□□ -0.79
VMP1-202ENST00000585847 RBMXL1Q96E39 390 aaKnown RBP10.1□□□□□ -0.79
VMP1-202ENST00000585847 QTRT1Q9BXR0 403 aaKnown RBP10.1□□□□□ -0.79
VMP1-202ENST00000585847 PARD6GQ9BYG4 376 aaPredicted RBP10.1□□□□□ -0.79
VMP1-202ENST00000585847 PSENENQ9NZ42 101 aa10.1□□□□□ -0.79
VMP1-202ENST00000585847 TCF19Q9Y242 345 aa10.1□□□□□ -0.79
VMP1-202ENST00000585847 HILPDAQ9Y5L2 63 aa10.1□□□□□ -0.79
VMP1-202ENST00000585847 OR51B2Q9Y5P1 312 aa10.1□□□□□ -0.79
VMP1-202ENST00000585847 FNDC10F2Z333 226 aa10.09□□□□□ -0.79
VMP1-202ENST00000585847 IGLV2-23P01705 113 aa10.09□□□□□ -0.79
VMP1-202ENST00000585847 HTR2BP41595 481 aa10.09□□□□□ -0.79
VMP1-202ENST00000585847 HOXA1P49639 335 aaPredicted RBP10.09□□□□□ -0.79
VMP1-202ENST00000585847 SUB1P53999 127 aaKnown RBP eCLIP10.09□□□□□ -0.79
VMP1-202ENST00000585847 PSG5Q15238 335 aa10.09□□□□□ -0.79
VMP1-202ENST00000585847 SSX2Q16385 188 aa10.09□□□□□ -0.79
VMP1-202ENST00000585847 PRSS8Q16651 343 aa10.09□□□□□ -0.79
VMP1-202ENST00000585847 SSX9Q7RTT3 188 aa10.09□□□□□ -0.79
VMP1-202ENST00000585847 PPP1R27Q86WC6 154 aa10.09□□□□□ -0.79
VMP1-202ENST00000585847 Q8N6K4 173 aa10.09□□□□□ -0.79
VMP1-202ENST00000585847 RBKSQ9H477 322 aa10.09□□□□□ -0.79
VMP1-202ENST00000585847 PAIP2BQ9ULR5 123 aaKnown RBP10.09□□□□□ -0.79
VMP1-202ENST00000585847 SIGLEC9Q9Y336 463 aa10.09□□□□□ -0.79
VMP1-202ENST00000585847 FAM96BQ9Y3D0 163 aa10.09□□□□□ -0.79
VMP1-202ENST00000585847 CORTO00230 105 aa10.08□□□□□ -0.8
VMP1-202ENST00000585847 RRHO14718 337 aa10.08□□□□□ -0.8
VMP1-202ENST00000585847 CYB5BO43169 146 aa10.08□□□□□ -0.8
VMP1-202ENST00000585847 FGF16O43320 207 aa10.08□□□□□ -0.8
VMP1-202ENST00000585847 CRYGBP07316 175 aa10.08□□□□□ -0.8
VMP1-202ENST00000585847 IER3P46695 156 aa10.08□□□□□ -0.8
VMP1-202ENST00000585847 LINC00205P59089 165 aa10.08□□□□□ -0.8
VMP1-202ENST00000585847 ERHP84090 104 aaKnown RBP10.08□□□□□ -0.8
VMP1-202ENST00000585847 SRSF2Q01130 221 aaKnown RBP10.08□□□□□ -0.8
VMP1-202ENST00000585847 MMDQ15546 238 aa10.08□□□□□ -0.8
VMP1-202ENST00000585847 TEX261Q6UWH6 196 aa10.08□□□□□ -0.8
VMP1-202ENST00000585847 BAP18Q8IXM2 172 aa10.08□□□□□ -0.8
VMP1-202ENST00000585847 OR1S2Q8NGQ3 325 aa10.08□□□□□ -0.8
VMP1-202ENST00000585847 ZNF471Q9BX82 626 aaPredicted RBP10.08□□□□□ -0.8
VMP1-202ENST00000585847 MAGT1Q9H0U3 335 aa10.08□□□□□ -0.8
VMP1-202ENST00000585847 HEYLQ9NQ87 328 aaPredicted RBP10.08□□□□□ -0.8
VMP1-202ENST00000585847 KCNIP2Q9NS61 270 aa10.08□□□□□ -0.8
VMP1-202ENST00000585847 FBXL17Q9UF56 701 aa10.08□□□□□ -0.8
VMP1-202ENST00000585847 SRRM4A7MD48 611 aaKnown RBP10.07□□□□□ -0.8
VMP1-202ENST00000585847 SLC25A17O43808 307 aa10.07□□□□□ -0.8
VMP1-202ENST00000585847 IGKV1D-33P01593 117 aa10.07□□□□□ -0.8
VMP1-202ENST00000585847 IGKV1-33P01594 117 aa10.07□□□□□ -0.8
VMP1-202ENST00000585847 IGHV4-59P01825 116 aa10.07□□□□□ -0.8
VMP1-202ENST00000585847 VDAC2P45880 294 aaPredicted RBP10.07□□□□□ -0.8
VMP1-202ENST00000585847 PAX9P55771 341 aa10.07□□□□□ -0.8
VMP1-202ENST00000585847 OR2B8PP59922 312 aa10.07□□□□□ -0.8
VMP1-202ENST00000585847 HILS1P60008 231 aa10.07□□□□□ -0.8
VMP1-202ENST00000585847 NDUFA5Q16718 116 aa10.07□□□□□ -0.8
VMP1-202ENST00000585847 VKORC1L1Q8N0U8 176 aa10.07□□□□□ -0.8
VMP1-202ENST00000585847 ZNF114Q8NC26 417 aa10.07□□□□□ -0.8
VMP1-202ENST00000585847 SLC24A4Q8NFF2 622 aa10.07□□□□□ -0.8
VMP1-202ENST00000585847 OR10P1Q8NGE3 313 aa10.07□□□□□ -0.8
VMP1-202ENST00000585847 OR5R1Q8NH85 324 aa10.07□□□□□ -0.8
VMP1-202ENST00000585847 GNPNAT1Q96EK6 184 aaPredicted RBP10.07□□□□□ -0.8
VMP1-202ENST00000585847 EAF1Q96JC9 268 aaPredicted RBP10.07□□□□□ -0.8
VMP1-202ENST00000585847 TMEM68Q96MH6 324 aa10.07□□□□□ -0.8
VMP1-202ENST00000585847 ATP5SQ99766 215 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms