RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 ECSCRQ19T08 205 aa14.44□□□□□ -0.1
RFFL-211ENST00000584541 UNQ5815/PRO19632Q6UWF5 114 aa14.44□□□□□ -0.1
RFFL-211ENST00000584541 OR4D5Q8NGN0 318 aa14.44□□□□□ -0.1
RFFL-211ENST00000584541 HSPB7Q9UBY9 170 aa14.44□□□□□ -0.1
RFFL-211ENST00000584541 ZNF580Q9UK33 172 aa14.44□□□□□ -0.1
RFFL-211ENST00000584541 hCG_2014768A0A024R1R8 64 aa14.43□□□□□ -0.1
RFFL-211ENST00000584541 TRAV41A0A0B4J266 112 aa14.43□□□□□ -0.1
RFFL-211ENST00000584541 E7EUB6 86 aa14.43□□□□□ -0.1
RFFL-211ENST00000584541 HKR1P10072 659 aa14.43□□□□□ -0.1
RFFL-211ENST00000584541 CRIP2P52943 208 aaPredicted RBP14.43□□□□□ -0.1
RFFL-211ENST00000584541 TMEM95Q3KNT9 176 aa14.43□□□□□ -0.1
RFFL-211ENST00000584541 PDLIM3Q53GG5 364 aaPredicted RBP14.43□□□□□ -0.1
RFFL-211ENST00000584541 AKIRIN2Q53H80 203 aa14.43□□□□□ -0.1
RFFL-211ENST00000584541 STPG2Q8N412 459 aa14.43□□□□□ -0.1
RFFL-211ENST00000584541 LFNGQ8NES3 379 aa14.43□□□□□ -0.1
RFFL-211ENST00000584541 OR11H7Q8NGC8 314 aa14.43□□□□□ -0.1
RFFL-211ENST00000584541 NMES1Q9C002 83 aa14.43□□□□□ -0.1
RFFL-211ENST00000584541 ZFP57Q9NU63 452 aa14.43□□□□□ -0.1
RFFL-211ENST00000584541 FBXO7Q9Y3I1 522 aa14.43□□□□□ -0.1
RFFL-211ENST00000584541 HMX3A6NHT5 357 aa14.42□□□□□ -0.1
RFFL-211ENST00000584541 CGB1A6NKQ9 187 aa14.42□□□□□ -0.1
RFFL-211ENST00000584541 TEX22C9J3V5 150 aa14.42□□□□□ -0.1
RFFL-211ENST00000584541 EGR2P11161 476 aaPredicted RBP14.42□□□□□ -0.1
RFFL-211ENST00000584541 CXCL3P19876 107 aa14.42□□□□□ -0.1
RFFL-211ENST00000584541 H2BFSP57053 126 aa14.42□□□□□ -0.1
RFFL-211ENST00000584541 SLC35B1P78383 322 aa14.42□□□□□ -0.1
RFFL-211ENST00000584541 ERHP84090 104 aaKnown RBP14.42□□□□□ -0.1
RFFL-211ENST00000584541 SPINK9Q5DT21 86 aa14.42□□□□□ -0.1
RFFL-211ENST00000584541 CXorf66Q5JRM2 361 aaPredicted RBP14.42□□□□□ -0.1
RFFL-211ENST00000584541 PRIMA1Q86XR5 153 aa14.42□□□□□ -0.1
RFFL-211ENST00000584541 HIPK2Q9H2X6 1198 aa14.42□□□□□ -0.1
RFFL-211ENST00000584541 RBKSQ9H477 322 aa14.42□□□□□ -0.1
RFFL-211ENST00000584541 LINC00527Q9UJ94 153 aa14.42□□□□□ -0.1
RFFL-211ENST00000584541 WSB1Q9Y6I7 421 aa14.42□□□□□ -0.1
RFFL-211ENST00000584541 CUBNO60494 3623 aa14.42□□□□□ -0.1
RFFL-211ENST00000584541 APELAP0DMC3 54 aa14.41□□□□□ -0.1
RFFL-211ENST00000584541 ID3Q02535 119 aa14.41□□□□□ -0.1
RFFL-211ENST00000584541 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.41□□□□□ -0.1
RFFL-211ENST00000584541 OR10W1Q8NGF6 305 aa14.41□□□□□ -0.1
RFFL-211ENST00000584541 DTD1Q8TEA8 209 aa14.41□□□□□ -0.1
RFFL-211ENST00000584541 ASB13Q8WXK3 278 aa14.41□□□□□ -0.1
RFFL-211ENST00000584541 TAF15Q92804 592 aaKnown RBP eCLIP14.41□□□□□ -0.12e-6■■□□□ 11.9
RFFL-211ENST00000584541 NOL4LQ96MY1 436 aaPredicted RBP14.41□□□□□ -0.1
RFFL-211ENST00000584541 ZNF436Q9C0F3 470 aaPredicted RBP14.41□□□□□ -0.1
RFFL-211ENST00000584541 HEYLQ9NQ87 328 aaPredicted RBP14.41□□□□□ -0.1
RFFL-211ENST00000584541 SERTAD4Q9NUC0 356 aa14.41□□□□□ -0.1
RFFL-211ENST00000584541 NIPBLQ6KC79 2804 aaeCLIP14.4□□□□□ -0.1
RFFL-211ENST00000584541 A0A1B0GUS0 222 aa14.4□□□□□ -0.1
RFFL-211ENST00000584541 A0A1B0GW64 132 aa14.4□□□□□ -0.1
RFFL-211ENST00000584541 IGLC7A0M8Q6 106 aa14.4□□□□□ -0.1
RFFL-211ENST00000584541 G3V318 75 aa14.4□□□□□ -0.1
RFFL-211ENST00000584541 SYNGR2O43760 224 aa14.4□□□□□ -0.1
RFFL-211ENST00000584541 LY86O95711 162 aa14.4□□□□□ -0.1
RFFL-211ENST00000584541 OR13C7P0DN81 318 aa14.4□□□□□ -0.1
RFFL-211ENST00000584541 CENPVQ7Z7K6 275 aaPredicted RBP14.4□□□□□ -0.1
RFFL-211ENST00000584541 LINC01006Q8NI28 216 aa14.4□□□□□ -0.1
RFFL-211ENST00000584541 CIB3Q96Q77 187 aaPredicted RBP14.4□□□□□ -0.1
RFFL-211ENST00000584541 MAGT1Q9H0U3 335 aa14.4□□□□□ -0.1
RFFL-211ENST00000584541 FBN3Q75N90 2809 aa14.39□□□□□ -0.11
RFFL-211ENST00000584541 CLPSL1A2RUU4 121 aa14.39□□□□□ -0.11
RFFL-211ENST00000584541 PSMB11A5LHX3 300 aa14.39□□□□□ -0.11
RFFL-211ENST00000584541 INS-IGF2F8WCM5 200 aa14.39□□□□□ -0.11
RFFL-211ENST00000584541 MBPP02686 304 aaPredicted RBP14.39□□□□□ -0.11
RFFL-211ENST00000584541 AREGP15514 252 aa14.39□□□□□ -0.11
RFFL-211ENST00000584541 PSMB6P28072 239 aa14.39□□□□□ -0.11
RFFL-211ENST00000584541 SNCAP37840 140 aa14.39□□□□□ -0.11
RFFL-211ENST00000584541 S100A10P60903 97 aa14.39□□□□□ -0.11
RFFL-211ENST00000584541 POLR2GP62487 172 aaKnown RBP eCLIP14.39□□□□□ -0.11
RFFL-211ENST00000584541 SRSF4Q08170 494 aaKnown RBP14.39□□□□□ -0.11
RFFL-211ENST00000584541 FOXL1Q12952 345 aa14.39□□□□□ -0.11
RFFL-211ENST00000584541 TTC9CQ8N5M4 171 aa14.39□□□□□ -0.11
RFFL-211ENST00000584541 LSM5Q9Y4Y9 91 aaKnown RBP14.39□□□□□ -0.11
RFFL-211ENST00000584541 RNF114Q9Y508 228 aa14.39□□□□□ -0.11
RFFL-211ENST00000584541 NPIPB5A8MRT5 1133 aa14.38□□□□□ -0.11
RFFL-211ENST00000584541 CYB5BO43169 146 aa14.38□□□□□ -0.11
RFFL-211ENST00000584541 SSSCA1O60232 199 aa14.38□□□□□ -0.11
RFFL-211ENST00000584541 RLN2P04090 185 aa14.38□□□□□ -0.11
RFFL-211ENST00000584541 REG1AP05451 166 aa14.38□□□□□ -0.11
RFFL-211ENST00000584541 GIPP09681 153 aaPredicted RBP14.38□□□□□ -0.11
RFFL-211ENST00000584541 PET100P0DJ07 73 aa14.38□□□□□ -0.11
RFFL-211ENST00000584541 DEFA4P12838 97 aa14.38□□□□□ -0.11
RFFL-211ENST00000584541 PVALBP20472 110 aaPredicted RBP14.38□□□□□ -0.11
RFFL-211ENST00000584541 SUB1P53999 127 aaKnown RBP eCLIP14.38□□□□□ -0.11
RFFL-211ENST00000584541 WT1-ASQ06250 92 aa14.38□□□□□ -0.11
RFFL-211ENST00000584541 IL15RAQ13261 267 aa14.38□□□□□ -0.11
RFFL-211ENST00000584541 RAB32Q13637 225 aa14.38□□□□□ -0.11
RFFL-211ENST00000584541 ASPHD1Q5U4P2 390 aa14.38□□□□□ -0.11
RFFL-211ENST00000584541 OR2C3Q8N628 320 aa14.38□□□□□ -0.11
RFFL-211ENST00000584541 OR5T1Q8NG75 326 aa14.38□□□□□ -0.11
RFFL-211ENST00000584541 FAM110DQ8TAY7 271 aaPredicted RBP14.38□□□□□ -0.11
RFFL-211ENST00000584541 A0A1B0GVG6 124 aa14.37□□□□□ -0.11
RFFL-211ENST00000584541 K7EPK0 472 aa14.37□□□□□ -0.11
RFFL-211ENST00000584541 L7N2F9 121 aa14.37□□□□□ -0.11
RFFL-211ENST00000584541 IAPPP10997 89 aa14.37□□□□□ -0.11
RFFL-211ENST00000584541 MDKP21741 143 aaPredicted RBP14.37□□□□□ -0.11
RFFL-211ENST00000584541 HTR2BP41595 481 aa14.37□□□□□ -0.11
RFFL-211ENST00000584541 BCAP31P51572 246 aa14.37□□□□□ -0.11
RFFL-211ENST00000584541 RAP2BP61225 183 aa14.37□□□□□ -0.11
RFFL-211ENST00000584541 VAMP2P63027 116 aa14.37□□□□□ -0.11
RFFL-211ENST00000584541 RPP30P78346 268 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms