RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 CCDC140Q96MF4 163 aa14.84□□□□□ -0.03
SREBF1-220ENST00000581707 ASCL2Q99929 193 aa14.84□□□□□ -0.03
SREBF1-220ENST00000581707 HINT2Q9BX68 163 aa14.84□□□□□ -0.03
SREBF1-220ENST00000581707 NDUFA4L2Q9NRX3 87 aa14.84□□□□□ -0.03
SREBF1-220ENST00000581707 PRNDQ9UKY0 176 aa14.84□□□□□ -0.03
SREBF1-220ENST00000581707 TRBV7-1A0A0A6YYK4 115 aa14.83□□□□□ -0.04
SREBF1-220ENST00000581707 CYB5BO43169 146 aa14.83□□□□□ -0.04
SREBF1-220ENST00000581707 NOL3O60936 208 aaKnown RBP14.83□□□□□ -0.04
SREBF1-220ENST00000581707 OR2C1O95371 312 aa14.83□□□□□ -0.04
SREBF1-220ENST00000581707 PTBP1P26599 531 aaKnown RBP eCLIP14.83□□□□□ -0.04
SREBF1-220ENST00000581707 ARL3P36405 182 aa14.83□□□□□ -0.04
SREBF1-220ENST00000581707 TAS2R19P59542 299 aa14.83□□□□□ -0.04
SREBF1-220ENST00000581707 MRPS10P82664 201 aaKnown RBP14.83□□□□□ -0.04
SREBF1-220ENST00000581707 WT1-ASQ06250 92 aa14.83□□□□□ -0.04
SREBF1-220ENST00000581707 OR4D10Q8NGI6 311 aa14.83□□□□□ -0.04
SREBF1-220ENST00000581707 ZNF486Q96H40 463 aaPredicted RBP14.83□□□□□ -0.04
SREBF1-220ENST00000581707 DIRAS2Q96HU8 199 aa14.83□□□□□ -0.04
SREBF1-220ENST00000581707 CXorf58Q96LI9 332 aa14.83□□□□□ -0.04
SREBF1-220ENST00000581707 TSC22D3Q99576 134 aa14.83□□□□□ -0.04
SREBF1-220ENST00000581707 FKBP11Q9NYL4 201 aa14.83□□□□□ -0.04
SREBF1-220ENST00000581707 THYN1Q9P016 225 aa14.83□□□□□ -0.04
SREBF1-220ENST00000581707 MFSD2BA6NFX1 497 aa14.82□□□□□ -0.04
SREBF1-220ENST00000581707 RAB3DO95716 219 aa14.82□□□□□ -0.04
SREBF1-220ENST00000581707 CD74P04233 296 aa14.82□□□□□ -0.04
SREBF1-220ENST00000581707 SERPINE2P07093 398 aa14.82□□□□□ -0.04
SREBF1-220ENST00000581707 PI3P19957 117 aa14.82□□□□□ -0.04
SREBF1-220ENST00000581707 RND3P61587 244 aa14.82□□□□□ -0.04
SREBF1-220ENST00000581707 SSBP1Q04837 148 aaKnown RBP14.82□□□□□ -0.04
SREBF1-220ENST00000581707 STEAP1BQ6NZ63 245 aa14.82□□□□□ -0.04
SREBF1-220ENST00000581707 GDPD1Q8N9F7 314 aa14.82□□□□□ -0.04
SREBF1-220ENST00000581707 TERB2Q8NHR7 220 aa14.82□□□□□ -0.04
SREBF1-220ENST00000581707 LSM10Q969L4 123 aaKnown RBP14.82□□□□□ -0.04
SREBF1-220ENST00000581707 SEC22AQ96IW7 307 aa14.82□□□□□ -0.04
SREBF1-220ENST00000581707 H3BMQ9 156 aa14.81□□□□□ -0.04
SREBF1-220ENST00000581707 IGKV1-39P01597 117 aa14.81□□□□□ -0.04
SREBF1-220ENST00000581707 IGKV1D-39P04432 117 aa14.81□□□□□ -0.04
SREBF1-220ENST00000581707 CLEC3BP05452 202 aa14.81□□□□□ -0.04
SREBF1-220ENST00000581707 MECP2P51608 486 aaKnown RBP14.81□□□□□ -0.04
SREBF1-220ENST00000581707 PIGPP57054 158 aa14.81□□□□□ -0.04
SREBF1-220ENST00000581707 SCGB2B2Q4G0G5 96 aa14.81□□□□□ -0.04
SREBF1-220ENST00000581707 LCN12Q6JVE5 192 aa14.81□□□□□ -0.04
SREBF1-220ENST00000581707 H2BFWTQ7Z2G1 175 aa14.81□□□□□ -0.04
SREBF1-220ENST00000581707 GPHB5Q86YW7 130 aa14.81□□□□□ -0.04
SREBF1-220ENST00000581707 Q8N1Y9 231 aa14.81□□□□□ -0.04
SREBF1-220ENST00000581707 OR5B3Q8NH48 314 aa14.81□□□□□ -0.04
SREBF1-220ENST00000581707 ISOC1Q96CN7 298 aa14.81□□□□□ -0.04
SREBF1-220ENST00000581707 TMEM14BQ9NUH8 114 aa14.81□□□□□ -0.04
SREBF1-220ENST00000581707 RABL2AQ9UBK7 228 aaPredicted RBP14.81□□□□□ -0.04
SREBF1-220ENST00000581707 RABL2BQ9UNT1 228 aa14.81□□□□□ -0.04
SREBF1-220ENST00000581707 DBX1A6NMT0 343 aa14.8□□□□□ -0.04
SREBF1-220ENST00000581707 LGALS9O00182 355 aa14.8□□□□□ -0.04
SREBF1-220ENST00000581707 PPP5CP53041 499 aa14.8□□□□□ -0.04
SREBF1-220ENST00000581707 IL18Q14116 193 aa14.8□□□□□ -0.04
SREBF1-220ENST00000581707 FAM106AQ4KMX7 169 aa14.8□□□□□ -0.04
SREBF1-220ENST00000581707 SLC25A24Q6NUK1 477 aa14.8□□□□□ -0.04
SREBF1-220ENST00000581707 ADAMTSL5Q6ZMM2 481 aa14.8□□□□□ -0.04
SREBF1-220ENST00000581707 Q8N402 240 aa14.8□□□□□ -0.04
SREBF1-220ENST00000581707 OR4A16Q8NH70 328 aa14.8□□□□□ -0.04
SREBF1-220ENST00000581707 ZNF502Q8TBZ5 544 aa14.8□□□□□ -0.04
SREBF1-220ENST00000581707 ZFAND1Q8TCF1 268 aa14.8□□□□□ -0.04
SREBF1-220ENST00000581707 SMIM4Q8WVI0 70 aa14.8□□□□□ -0.04
SREBF1-220ENST00000581707 MRGPRFQ96AM1 343 aa14.8□□□□□ -0.04
SREBF1-220ENST00000581707 TMEM56Q96MV1 263 aa14.8□□□□□ -0.04
SREBF1-220ENST00000581707 C6orf62Q9GZU0 229 aaPredicted RBP14.8□□□□□ -0.04
SREBF1-220ENST00000581707 U3KQK5 164 aa14.8□□□□□ -0.04
SREBF1-220ENST00000581707 TENM3Q9P273 2699 aa14.79□□□□□ -0.04
SREBF1-220ENST00000581707 C2orf70A6NJV1 201 aa14.79□□□□□ -0.04
SREBF1-220ENST00000581707 C15orf61A6NNL5 157 aa14.79□□□□□ -0.04
SREBF1-220ENST00000581707 CTDSPLO15194 276 aa14.79□□□□□ -0.04
SREBF1-220ENST00000581707 FRMD6-AS1P0C7T7 363 aa14.79□□□□□ -0.04
SREBF1-220ENST00000581707 MEF2DQ14814 521 aa14.79□□□□□ -0.04
SREBF1-220ENST00000581707 OR2K2Q8NGT1 345 aa14.79□□□□□ -0.04
SREBF1-220ENST00000581707 VN1R17PQ8TDU5 208 aa14.79□□□□□ -0.04
SREBF1-220ENST00000581707 SLIRPQ9GZT3 109 aaKnown RBP14.79□□□□□ -0.04
SREBF1-220ENST00000581707 F11RQ9Y624 299 aaKnown RBP14.79□□□□□ -0.04
SREBF1-220ENST00000581707 ZNF320A2RRD8 509 aa14.78□□□□□ -0.04
SREBF1-220ENST00000581707 IZUMO1RA6ND01 250 aa14.78□□□□□ -0.04
SREBF1-220ENST00000581707 FOLR2P14207 255 aa14.78□□□□□ -0.04
SREBF1-220ENST00000581707 GPR183P32249 361 aa14.78□□□□□ -0.04
SREBF1-220ENST00000581707 SBSPONQ8IVN8 264 aa14.78□□□□□ -0.04
SREBF1-220ENST00000581707 OR13C8Q8NGS7 320 aa14.78□□□□□ -0.04
SREBF1-220ENST00000581707 DYNLRB2Q8TF09 96 aa14.78□□□□□ -0.04
SREBF1-220ENST00000581707 TP53RKQ96S44 253 aa14.78□□□□□ -0.04
SREBF1-220ENST00000581707 ZC4H2Q9NQZ6 224 aa14.78□□□□□ -0.04
SREBF1-220ENST00000581707 COPZ2Q9P299 210 aa14.78□□□□□ -0.04
SREBF1-220ENST00000581707 STAB2Q8WWQ8 2551 aa14.77□□□□□ -0.04
SREBF1-220ENST00000581707 C3orf85A0A1B0GTC6 90 aa14.77□□□□□ -0.05
SREBF1-220ENST00000581707 IGHV4-30-4P0DP06 118 aa14.77□□□□□ -0.05
SREBF1-220ENST00000581707 MFAP2P55001 183 aa14.77□□□□□ -0.05
SREBF1-220ENST00000581707 CD300EQ496F6 205 aaPredicted RBP14.77□□□□□ -0.05
SREBF1-220ENST00000581707 FAAP20Q6NZ36 180 aa14.77□□□□□ -0.05
SREBF1-220ENST00000581707 SGPP2Q8IWX5 399 aa14.77□□□□□ -0.05
SREBF1-220ENST00000581707 CCDC71LQ8N9Z2 235 aa14.77□□□□□ -0.05
SREBF1-220ENST00000581707 MARCH1Q8TCQ1 289 aa14.77□□□□□ -0.05
SREBF1-220ENST00000581707 WWC2-AS2Q96NR7 200 aa14.77□□□□□ -0.05
SREBF1-220ENST00000581707 DISC1C4P0D8 188 aa14.76□□□□□ -0.05
SREBF1-220ENST00000581707 CTSDP07339 412 aaPredicted RBP14.76□□□□□ -0.05
SREBF1-220ENST00000581707 AKAIN1P0CW23 69 aa14.76□□□□□ -0.05
SREBF1-220ENST00000581707 EDN2P20800 178 aa14.76□□□□□ -0.05
SREBF1-220ENST00000581707 DEFB114Q30KQ6 69 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms