RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-218	ENST00000578469	MINOS1-NBL1	R4GNA1	71 aa		13.67	□□□□□ -0.22
SREBF1-218	ENST00000578469	IGHV3-72	A0A0B4J1Y9	119 aa		13.66	□□□□□ -0.22
SREBF1-218	ENST00000578469	OOSP1	A8MZH6	123 aa		13.66	□□□□□ -0.22
SREBF1-218	ENST00000578469	UMAD1	C9J7I0	102 aa		13.66	□□□□□ -0.22
SREBF1-218	ENST00000578469	ATP5I	P56385	69 aa	Predicted RBP	13.66	□□□□□ -0.22
SREBF1-218	ENST00000578469	KLRD1	Q13241	179 aa		13.66	□□□□□ -0.22
SREBF1-218	ENST00000578469	HCP5	Q6MZN7	132 aa		13.66	□□□□□ -0.22
SREBF1-218	ENST00000578469	CCDC144NL	Q6NUI1	221 aa		13.66	□□□□□ -0.22
SREBF1-218	ENST00000578469	TEX45	Q8NA69	505 aa		13.66	□□□□□ -0.22
SREBF1-218	ENST00000578469	OR1L8	Q8NGR8	309 aa		13.66	□□□□□ -0.22
SREBF1-218	ENST00000578469	OR2G3	Q8NGZ4	309 aa		13.66	□□□□□ -0.22
SREBF1-218	ENST00000578469	MXRA5	Q9NR99	2828 aa		13.65	□□□□□ -0.22
SREBF1-218	ENST00000578469	TEX50	A0A1B0GTY4	177 aa		13.65	□□□□□ -0.22
SREBF1-218	ENST00000578469	C15orf62	A8K5M9	175 aa		13.65	□□□□□ -0.22
SREBF1-218	ENST00000578469	PMS2P5	A8MQ11	134 aa		13.65	□□□□□ -0.22
SREBF1-218	ENST00000578469	NUDT19	A8MXV4	375 aa		13.65	□□□□□ -0.22
SREBF1-218	ENST00000578469	IGLV2-23	P01705	113 aa		13.65	□□□□□ -0.22
SREBF1-218	ENST00000578469	PRH1	P02810	166 aa		13.65	□□□□□ -0.22
SREBF1-218	ENST00000578469	CD1B	P29016	333 aa		13.65	□□□□□ -0.22
SREBF1-218	ENST00000578469	F2RL1	P55085	397 aa		13.65	□□□□□ -0.22
SREBF1-218	ENST00000578469	LRRC75B	Q2VPJ9	315 aa		13.65	□□□□□ -0.22
SREBF1-218	ENST00000578469	SH3BGRL3	Q9H299	93 aa		13.65	□□□□□ -0.22
SREBF1-218	ENST00000578469	PARP11	Q9NR21	331 aa		13.65	□□□□□ -0.22
SREBF1-218	ENST00000578469	MMP26	Q9NRE1	261 aa		13.65	□□□□□ -0.22
SREBF1-218	ENST00000578469	UQCC1	Q9NVA1	299 aa		13.65	□□□□□ -0.22
SREBF1-218	ENST00000578469	IGHV4-61	A0A0C4DH41	118 aa		13.64	□□□□□ -0.23
SREBF1-218	ENST00000578469		A0A1W2PN81	502 aa		13.64	□□□□□ -0.23
SREBF1-218	ENST00000578469		A0A1W2PPI3	338 aa		13.64	□□□□□ -0.23
SREBF1-218	ENST00000578469	RNASEK-C17orf49	H0YIS7	233 aa		13.64	□□□□□ -0.23
SREBF1-218	ENST00000578469	TRIM77	I1YAP6	450 aa		13.64	□□□□□ -0.23
SREBF1-218	ENST00000578469	SLC25A17	O43808	307 aa		13.64	□□□□□ -0.23
SREBF1-218	ENST00000578469	CHRNA7	P36544	502 aa		13.64	□□□□□ -0.23
SREBF1-218	ENST00000578469	CAMLG	P49069	296 aa		13.64	□□□□□ -0.23
SREBF1-218	ENST00000578469	ETV3L	Q6ZN32	361 aa		13.64	□□□□□ -0.23
SREBF1-218	ENST00000578469	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.64	□□□□□ -0.23
SREBF1-218	ENST00000578469	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.64	□□□□□ -0.23
SREBF1-218	ENST00000578469	THNSL2	Q86YJ6	484 aa		13.64	□□□□□ -0.23
SREBF1-218	ENST00000578469	MRPL41	Q8IXM3	137 aa	Known RBP	13.64	□□□□□ -0.23
SREBF1-218	ENST00000578469	SLC24A4	Q8NFF2	622 aa		13.64	□□□□□ -0.23
SREBF1-218	ENST00000578469	GGACT	Q9BVM4	153 aa		13.64	□□□□□ -0.23
SREBF1-218	ENST00000578469	TBL2	Q9Y4P3	447 aa	Known RBP	13.64	□□□□□ -0.23
SREBF1-218	ENST00000578469	FBN1	P35555	2871 aa	Known RBP	13.64	□□□□□ -0.23
SREBF1-218	ENST00000578469	SON	P18583	2426 aa	Known RBP	13.63	□□□□□ -0.23
SREBF1-218	ENST00000578469	ANKRD34B	A5PLL1	514 aa		13.63	□□□□□ -0.23
SREBF1-218	ENST00000578469	CRLF1	O75462	422 aa		13.63	□□□□□ -0.23
SREBF1-218	ENST00000578469	IFNA4	P05014	189 aa		13.63	□□□□□ -0.23
SREBF1-218	ENST00000578469	SLC25A16	P16260	332 aa		13.63	□□□□□ -0.23
SREBF1-218	ENST00000578469	NPY1R	P25929	384 aa		13.63	□□□□□ -0.23
SREBF1-218	ENST00000578469	UBE2E1	P51965	193 aa		13.63	□□□□□ -0.23
SREBF1-218	ENST00000578469	ERH	P84090	104 aa	Known RBP	13.63	□□□□□ -0.23
SREBF1-218	ENST00000578469	AANAT	Q16613	207 aa		13.63	□□□□□ -0.23
SREBF1-218	ENST00000578469	AKR1C8P	Q5T2L2	129 aa		13.63	□□□□□ -0.23
SREBF1-218	ENST00000578469	MMD2	Q8IY49	270 aa		13.63	□□□□□ -0.23
SREBF1-218	ENST00000578469	MARC2	Q969Z3	335 aa		13.63	□□□□□ -0.23
SREBF1-218	ENST00000578469	RBMXL1	Q96E39	390 aa	Known RBP	13.63	□□□□□ -0.23
SREBF1-218	ENST00000578469	FAM210A	Q96ND0	272 aa		13.63	□□□□□ -0.23
SREBF1-218	ENST00000578469	PSMG3	Q9BT73	122 aa	Predicted RBP	13.63	□□□□□ -0.23
SREBF1-218	ENST00000578469	WDR61	Q9GZS3	305 aa	Known RBP	13.63	□□□□□ -0.23
SREBF1-218	ENST00000578469	LPAR2	Q9HBW0	351 aa		13.63	□□□□□ -0.23
SREBF1-218	ENST00000578469	HILPDA	Q9Y5L2	63 aa		13.63	□□□□□ -0.23
SREBF1-218	ENST00000578469	IGHV4-30-2	A0A087WSY4	118 aa		13.62	□□□□□ -0.23
SREBF1-218	ENST00000578469	UBE2L5P	A0A1B0GUS4	154 aa		13.62	□□□□□ -0.23
SREBF1-218	ENST00000578469		A0A1W2PRD5	423 aa		13.62	□□□□□ -0.23
SREBF1-218	ENST00000578469		A0A1W2PRF3	423 aa		13.62	□□□□□ -0.23
SREBF1-218	ENST00000578469		A0A1W2PRM7	423 aa		13.62	□□□□□ -0.23
SREBF1-218	ENST00000578469	MFSD2B	A6NFX1	497 aa		13.62	□□□□□ -0.23
SREBF1-218	ENST00000578469	FAM157A	C9JC47	383 aa		13.62	□□□□□ -0.23
SREBF1-218	ENST00000578469	TIMM23	O14925	209 aa		13.62	□□□□□ -0.23
SREBF1-218	ENST00000578469	ACTL6B	O94805	426 aa		13.62	□□□□□ -0.23
SREBF1-218	ENST00000578469	MYOD1	P15172	320 aa		13.62	□□□□□ -0.23
SREBF1-218	ENST00000578469	MAS1L	P35410	378 aa		13.62	□□□□□ -0.23
SREBF1-218	ENST00000578469	PSG5	Q15238	335 aa		13.62	□□□□□ -0.23
SREBF1-218	ENST00000578469	PXDC1	Q5TGL8	231 aa		13.62	□□□□□ -0.23
SREBF1-218	ENST00000578469		Q6ZRG5	221 aa		13.62	□□□□□ -0.23
SREBF1-218	ENST00000578469	EIF4E3	Q8N5X7	224 aa	Known RBP	13.62	□□□□□ -0.23
SREBF1-218	ENST00000578469	TAF15	Q92804	592 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
SREBF1-218	ENST00000578469	TBX15	Q96SF7	602 aa		13.62	□□□□□ -0.23
SREBF1-218	ENST00000578469	REG4	Q9BYZ8	158 aa		13.62	□□□□□ -0.23
SREBF1-218	ENST00000578469	ZNF430	Q9H8G1	570 aa	Predicted RBP	13.62	□□□□□ -0.23
SREBF1-218	ENST00000578469	PLA2G2E	Q9NZK7	142 aa		13.62	□□□□□ -0.23
SREBF1-218	ENST00000578469	INS-IGF2	F8WCM5	200 aa		13.61	□□□□□ -0.23
SREBF1-218	ENST00000578469	RRH	O14718	337 aa		13.61	□□□□□ -0.23
SREBF1-218	ENST00000578469	OPN1MW	P04001	364 aa		13.61	□□□□□ -0.23
SREBF1-218	ENST00000578469	OPN1MW2	P0DN77	364 aa		13.61	□□□□□ -0.23
SREBF1-218	ENST00000578469	OPN1MW3	P0DN78	364 aa		13.61	□□□□□ -0.23
SREBF1-218	ENST00000578469	SNCA	P37840	140 aa		13.61	□□□□□ -0.23
SREBF1-218	ENST00000578469	DLK1	P80370	383 aa		13.61	□□□□□ -0.23
SREBF1-218	ENST00000578469	RUNX1	Q01196	453 aa		13.61	□□□□□ -0.23
SREBF1-218	ENST00000578469	HABP2	Q14520	560 aa	Predicted RBP	13.61	□□□□□ -0.23
SREBF1-218	ENST00000578469	CLEC12B	Q2HXU8	276 aa		13.61	□□□□□ -0.23
SREBF1-218	ENST00000578469	VWC2	Q2TAL6	325 aa		13.61	□□□□□ -0.23
SREBF1-218	ENST00000578469	DPPA3	Q6W0C5	159 aa		13.61	□□□□□ -0.23
SREBF1-218	ENST00000578469	IL34	Q6ZMJ4	242 aa		13.61	□□□□□ -0.23
SREBF1-218	ENST00000578469	LHFPL4	Q7Z7J7	247 aa		13.61	□□□□□ -0.23
SREBF1-218	ENST00000578469	RITA1	Q96K30	269 aa		13.61	□□□□□ -0.23
SREBF1-218	ENST00000578469	NDUFA4L2	Q9NRX3	87 aa		13.61	□□□□□ -0.23
SREBF1-218	ENST00000578469	METTL1	Q9UBP6	276 aa	Known RBP	13.61	□□□□□ -0.23
SREBF1-218	ENST00000578469	TIMM9	Q9Y5J7	89 aa		13.61	□□□□□ -0.23
SREBF1-218	ENST00000578469	RAB19	A4D1S5	217 aa		13.6	□□□□□ -0.23
SREBF1-218	ENST00000578469		I3L521	148 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms