RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 HIVEP1P15822 2718 aa13.09□□□□□ -0.31
ERCC4-208ENST00000576348 SH2D7A6NKC9 451 aaPredicted RBP13.09□□□□□ -0.31
ERCC4-208ENST00000576348 E5RGE8 158 aa13.09□□□□□ -0.31
ERCC4-208ENST00000576348 CRLF1O75462 422 aa13.09□□□□□ -0.31
ERCC4-208ENST00000576348 ERHP84090 104 aaKnown RBP13.09□□□□□ -0.31
ERCC4-208ENST00000576348 CD300CQ08708 224 aa13.09□□□□□ -0.31
ERCC4-208ENST00000576348 C11orf87Q6NUJ2 197 aa13.09□□□□□ -0.31
ERCC4-208ENST00000576348 PRSS54Q6PEW0 395 aa13.09□□□□□ -0.31
ERCC4-208ENST00000576348 SONP18583 2426 aaKnown RBP13.08□□□□□ -0.32
ERCC4-208ENST00000576348 TRAV14DV4A0A0A6YYC5 116 aa13.08□□□□□ -0.32
ERCC4-208ENST00000576348 MSGN1A6NI15 193 aa13.08□□□□□ -0.32
ERCC4-208ENST00000576348 KCNAB3O43448 404 aa13.08□□□□□ -0.32
ERCC4-208ENST00000576348 SNCAP37840 140 aa13.08□□□□□ -0.32
ERCC4-208ENST00000576348 CAV2P51636 162 aa13.08□□□□□ -0.32
ERCC4-208ENST00000576348 MRGPRG-AS1Q2M3A8 158 aa13.08□□□□□ -0.32
ERCC4-208ENST00000576348 PDLIM3Q53GG5 364 aaPredicted RBP13.08□□□□□ -0.32
ERCC4-208ENST00000576348 HSD17B13Q7Z5P4 300 aaPredicted RBP13.08□□□□□ -0.32
ERCC4-208ENST00000576348 HSPB9Q9BQS6 159 aa13.08□□□□□ -0.32
ERCC4-208ENST00000576348 PRSS22Q9GZN4 317 aa13.08□□□□□ -0.32
ERCC4-208ENST00000576348 NDUFA4L2Q9NRX3 87 aa13.08□□□□□ -0.32
ERCC4-208ENST00000576348 PSENENQ9NZ42 101 aa13.08□□□□□ -0.32
ERCC4-208ENST00000576348 OR5AC2Q9NZP5 309 aa13.08□□□□□ -0.32
ERCC4-208ENST00000576348 IGHV7-81A0A0B4J1V7 117 aa13.07□□□□□ -0.32
ERCC4-208ENST00000576348 TRIM77I1YAP6 450 aa13.07□□□□□ -0.32
ERCC4-208ENST00000576348 IFNA10P01566 189 aa13.07□□□□□ -0.32
ERCC4-208ENST00000576348 C1QBP02746 253 aa13.07□□□□□ -0.32
ERCC4-208ENST00000576348 CRYBA1P05813 215 aa13.07□□□□□ -0.32
ERCC4-208ENST00000576348 HNRNPCP07910 306 aaKnown RBP eCLIP13.07□□□□□ -0.32
ERCC4-208ENST00000576348 OR13C7P0DN81 318 aa13.07□□□□□ -0.32
ERCC4-208ENST00000576348 SLC25A4P12235 298 aa13.07□□□□□ -0.32
ERCC4-208ENST00000576348 TUSC1Q2TAM9 212 aa13.07□□□□□ -0.32
ERCC4-208ENST00000576348 Q5BKY6 102 aa13.07□□□□□ -0.32
ERCC4-208ENST00000576348 SLC35E3Q7Z769 313 aa13.07□□□□□ -0.32
ERCC4-208ENST00000576348 INO80EQ8NBZ0 244 aaPredicted RBP13.07□□□□□ -0.32
ERCC4-208ENST00000576348 SMIM8Q96KF7 97 aa13.07□□□□□ -0.32
ERCC4-208ENST00000576348 STRAPQ9Y3F4 350 aaKnown RBP13.07□□□□□ -0.32
ERCC4-208ENST00000576348 H0YIZ8 118 aa13.06□□□□□ -0.32
ERCC4-208ENST00000576348 H3BP45 60 aa13.06□□□□□ -0.32
ERCC4-208ENST00000576348 APELAP0DMC3 54 aa13.06□□□□□ -0.32
ERCC4-208ENST00000576348 SUB1P53999 127 aaKnown RBP eCLIP13.06□□□□□ -0.32
ERCC4-208ENST00000576348 TAS2R30P59541 319 aa13.06□□□□□ -0.32
ERCC4-208ENST00000576348 HILS1P60008 231 aa13.06□□□□□ -0.32
ERCC4-208ENST00000576348 SPANXN5Q5MJ07 72 aa13.06□□□□□ -0.32
ERCC4-208ENST00000576348 ZNF546Q86UE3 836 aa13.06□□□□□ -0.32
ERCC4-208ENST00000576348 OR10W1Q8NGF6 305 aa13.06□□□□□ -0.32
ERCC4-208ENST00000576348 SRSF8Q9BRL6 282 aaKnown RBP13.06□□□□□ -0.32
ERCC4-208ENST00000576348 FAM103A1Q9BTL3 118 aaKnown RBP13.06□□□□□ -0.32
ERCC4-208ENST00000576348 SLC25A31Q9H0C2 315 aa13.06□□□□□ -0.32
ERCC4-208ENST00000576348 WSB1Q9Y6I7 421 aa13.06□□□□□ -0.32
ERCC4-208ENST00000576348 CLDN34H7C241 214 aa13.05□□□□□ -0.32
ERCC4-208ENST00000576348 ARPC5O15511 151 aa13.05□□□□□ -0.32
ERCC4-208ENST00000576348 TCF21O43680 179 aa13.05□□□□□ -0.32
ERCC4-208ENST00000576348 TSC22D2O75157 780 aa13.05□□□□□ -0.32
ERCC4-208ENST00000576348 AMY1AP04745 511 aa13.05□□□□□ -0.32
ERCC4-208ENST00000576348 VDAC2P45880 294 aaPredicted RBP13.05□□□□□ -0.32
ERCC4-208ENST00000576348 P2RY1P47900 373 aa13.05□□□□□ -0.32
ERCC4-208ENST00000576348 BLCAPP62952 87 aa13.05□□□□□ -0.32
ERCC4-208ENST00000576348 TMEM267Q0VDI3 215 aaPredicted RBP13.05□□□□□ -0.32
ERCC4-208ENST00000576348 ECSCRQ19T08 205 aa13.05□□□□□ -0.32
ERCC4-208ENST00000576348 NOXA1Q86UR1 476 aa13.05□□□□□ -0.32
ERCC4-208ENST00000576348 STX12Q86Y82 276 aa13.05□□□□□ -0.32
ERCC4-208ENST00000576348 SLC24A4Q8NFF2 622 aa13.05□□□□□ -0.32
ERCC4-208ENST00000576348 PPP1R14BQ96C90 147 aa13.05□□□□□ -0.32
ERCC4-208ENST00000576348 HYLS1Q96M11 299 aa13.05□□□□□ -0.32
ERCC4-208ENST00000576348 RNF126Q9BV68 326 aa13.05□□□□□ -0.32
ERCC4-208ENST00000576348 U3KQ87 197 aa13.05□□□□□ -0.32
ERCC4-208ENST00000576348 CELSR1Q9NYQ6 3014 aa13.05□□□□□ -0.32
ERCC4-208ENST00000576348 ATP6V0E1O15342 81 aa13.04□□□□□ -0.32
ERCC4-208ENST00000576348 CYB5BO43169 146 aa13.04□□□□□ -0.32
ERCC4-208ENST00000576348 REG1AP05451 166 aa13.04□□□□□ -0.32
ERCC4-208ENST00000576348 OR8U8P0C7N1 319 aa13.04□□□□□ -0.32
ERCC4-208ENST00000576348 DEFA4P12838 97 aa13.04□□□□□ -0.32
ERCC4-208ENST00000576348 LYL1P12980 280 aa13.04□□□□□ -0.32
ERCC4-208ENST00000576348 NPY1RP25929 384 aa13.04□□□□□ -0.32
ERCC4-208ENST00000576348 HTR2BP41595 481 aa13.04□□□□□ -0.32
ERCC4-208ENST00000576348 RAB11AP62491 216 aa13.04□□□□□ -0.32
ERCC4-208ENST00000576348 SSBP2P81877 361 aaPredicted RBP13.04□□□□□ -0.32
ERCC4-208ENST00000576348 NDPQ00604 133 aa13.04□□□□□ -0.32
ERCC4-208ENST00000576348 UNQ5815/PRO19632Q6UWF5 114 aa13.04□□□□□ -0.32
ERCC4-208ENST00000576348 OR2C3Q8N628 320 aa13.04□□□□□ -0.32
ERCC4-208ENST00000576348 LFNGQ8NES3 379 aa13.04□□□□□ -0.32
ERCC4-208ENST00000576348 ESM1Q9NQ30 184 aa13.04□□□□□ -0.32
ERCC4-208ENST00000576348 IGLC7A0M8Q6 106 aa13.03□□□□□ -0.32
ERCC4-208ENST00000576348 FAM181BA6NEQ2 426 aa13.03□□□□□ -0.32
ERCC4-208ENST00000576348 FAM24AA6NFZ4 105 aa13.03□□□□□ -0.32
ERCC4-208ENST00000576348 CGB1A6NKQ9 187 aa13.03□□□□□ -0.32
ERCC4-208ENST00000576348 TEX22C9J3V5 150 aa13.03□□□□□ -0.32
ERCC4-208ENST00000576348 E7EUB6 86 aa13.03□□□□□ -0.32
ERCC4-208ENST00000576348 AP4M1O00189 453 aa13.03□□□□□ -0.32
ERCC4-208ENST00000576348 IGHG2P01859 326 aa13.03□□□□□ -0.32
ERCC4-208ENST00000576348 IFNA4P05014 189 aa13.03□□□□□ -0.32
ERCC4-208ENST00000576348 RNASE1P07998 156 aaKnown RBP13.03□□□□□ -0.32
ERCC4-208ENST00000576348 AREGP15514 252 aa13.03□□□□□ -0.32
ERCC4-208ENST00000576348 RPL12P30050 165 aaKnown RBP13.03□□□□□ -0.32
ERCC4-208ENST00000576348 EIF2B2P49770 351 aaKnown RBP13.03□□□□□ -0.32
ERCC4-208ENST00000576348 ATP5IP56385 69 aaPredicted RBP13.03□□□□□ -0.32
ERCC4-208ENST00000576348 UBA52P62987 128 aaKnown RBP13.03□□□□□ -0.32
ERCC4-208ENST00000576348 WT1-ASQ06250 92 aa13.03□□□□□ -0.32
ERCC4-208ENST00000576348 TMEM65Q6PI78 240 aa13.03□□□□□ -0.32
ERCC4-208ENST00000576348 SGMS2Q8NHU3 365 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms