RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 BET1LQ9NYM9 111 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 GNG12Q9UBI6 72 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 LNP1A1A4G5 178 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 NKX6-3A6NJ46 265 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 IGHV3-48P01763 117 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 LDLRAD2Q5SZI1 272 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 Q6ZR03 302 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 KIR3DL3Q8N743 410 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 STPG3Q8N7X2 389 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 KCNS1Q96KK3 526 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 PLEKHA3Q9HB20 300 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 V9GYV3 84 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 NCKAP5O14513 1909 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 LOC105371242A0A075B767 164 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 M0R1X1 148 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 NDUFS8O00217 210 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 BMPR1BO00238 502 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 SNAI2O43623 268 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 STAG3L2P0CL84 134 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 STAG3L3P0CL85 134 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 CTRLP40313 264 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 RPL8P62917 257 aaKnown RBP12.06□□□□□ -0.48
SCARF1-209ENST00000576012 EFNB3Q15768 340 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 TNXAQ16473 311 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 NIT1Q86X76 327 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 TSKUQ8WUA8 353 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 ARL2-SNX15V9GYD0 113 aa12.06□□□□□ -0.48
SCARF1-209ENST00000576012 IGFBP2P18065 325 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 SLAQ13239 276 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 UBE2V1Q13404 147 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 LYSMD4Q5XG99 296 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 LINC00696Q6ZRV3 163 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 MDP1Q86V88 176 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 OR13A1Q8NGR1 328 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 ZNF596Q8TC21 504 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 PMCHL2Q9BQD1 86 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 PCED1AQ9H1Q7 454 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 TECRQ9NZ01 308 aaKnown RBP12.05□□□□□ -0.48
SCARF1-209ENST00000576012 PIGBOS1A0A0B4J2F0 54 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 M0R2Z0 102 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 CRYABP02511 175 aaKnown RBP12.05□□□□□ -0.48
SCARF1-209ENST00000576012 USF1P22415 310 aaPredicted RBP12.05□□□□□ -0.48
SCARF1-209ENST00000576012 Q0VFX4 171 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 MLANAQ16655 118 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 FBLN7Q53RD9 439 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 KCNE4Q8WWG9 221 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 POLEQ07864 2286 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 MAGEA5P43359 124 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 FOXA3P55318 350 aaPredicted RBP12.05□□□□□ -0.48
SCARF1-209ENST00000576012 S100A7AQ86SG5 101 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 TCTEX1D1Q8N7M0 179 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 CDC42EP3Q9UKI2 254 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 WASHC3Q9Y3C0 194 aa12.05□□□□□ -0.48
SCARF1-209ENST00000576012 OR5B21A6NL26 309 aa12.04□□□□□ -0.48
SCARF1-209ENST00000576012 FOLR3P41439 243 aa12.04□□□□□ -0.48
SCARF1-209ENST00000576012 RTL8AQ9BWD3 113 aa12.04□□□□□ -0.48
SCARF1-209ENST00000576012 ZNF355PQ9NSJ1 428 aa12.04□□□□□ -0.48
SCARF1-209ENST00000576012 COX11Q9Y6N1 276 aa12.04□□□□□ -0.48
SCARF1-209ENST00000576012 ITGB1BP1O14713 200 aa12.04□□□□□ -0.48
SCARF1-209ENST00000576012 APCSP02743 223 aa12.04□□□□□ -0.48
SCARF1-209ENST00000576012 MFAP2P55001 183 aa12.04□□□□□ -0.48
SCARF1-209ENST00000576012 KLF3P57682 345 aaPredicted RBP12.04□□□□□ -0.48
SCARF1-209ENST00000576012 FOXF2Q12947 444 aa12.04□□□□□ -0.48
SCARF1-209ENST00000576012 TIGITQ495A1 244 aa12.04□□□□□ -0.48
SCARF1-209ENST00000576012 MPV17L2Q567V2 206 aa12.04□□□□□ -0.48
SCARF1-209ENST00000576012 UTF1Q5T230 341 aa12.04□□□□□ -0.48
SCARF1-209ENST00000576012 TMEM136Q6ZRR5 245 aa12.04□□□□□ -0.48
SCARF1-209ENST00000576012 TMEM30CPA0ZSE6 113 aa12.03□□□□□ -0.48
SCARF1-209ENST00000576012 J3KRW8 73 aa12.03□□□□□ -0.48
SCARF1-209ENST00000576012 IGLL1P15814 213 aa12.03□□□□□ -0.48
SCARF1-209ENST00000576012 GPR12P47775 334 aa12.03□□□□□ -0.48
SCARF1-209ENST00000576012 CYB561P49447 251 aa12.03□□□□□ -0.48
SCARF1-209ENST00000576012 TRAT1Q6PIZ9 186 aa12.03□□□□□ -0.48
SCARF1-209ENST00000576012 ZNF841Q6ZN19 808 aa12.03□□□□□ -0.48
SCARF1-209ENST00000576012 MPC1Q9Y5U8 109 aa12.03□□□□□ -0.48
SCARF1-209ENST00000576012 RAB29O14966 203 aa12.03□□□□□ -0.48
SCARF1-209ENST00000576012 PRRX1P54821 245 aa12.03□□□□□ -0.48
SCARF1-209ENST00000576012 ZNF331Q9NQX6 463 aaPredicted RBP12.03□□□□□ -0.48
SCARF1-209ENST00000576012 TRBV6-6A0A0A6YYG2 114 aa12.03□□□□□ -0.48
SCARF1-209ENST00000576012 PSG1P11464 419 aa12.03□□□□□ -0.48
SCARF1-209ENST00000576012 CXCL12P48061 93 aa12.03□□□□□ -0.48
SCARF1-209ENST00000576012 Q0VG73 95 aa12.03□□□□□ -0.48
SCARF1-209ENST00000576012 KLHDC1Q8N7A1 406 aa12.03□□□□□ -0.48
SCARF1-209ENST00000576012 TNFRSF14Q92956 283 aa12.03□□□□□ -0.48
SCARF1-209ENST00000576012 hDV102S1A0JD36 115 aa12.02□□□□□ -0.48
SCARF1-209ENST00000576012 ZNF718Q3SXZ3 478 aa12.02□□□□□ -0.48
SCARF1-209ENST00000576012 IBA57Q5T440 356 aaKnown RBP12.02□□□□□ -0.48
SCARF1-209ENST00000576012 TMEM108Q6UXF1 575 aa12.02□□□□□ -0.48
SCARF1-209ENST00000576012 MOB1BQ7L9L4 216 aa12.02□□□□□ -0.48
SCARF1-209ENST00000576012 OR2Y1Q8NGV0 311 aa12.02□□□□□ -0.48
SCARF1-209ENST00000576012 LOXL2Q9Y4K0 774 aa12.02□□□□□ -0.48
SCARF1-209ENST00000576012 EBLN2Q6P2I7 272 aa12.02□□□□□ -0.49
SCARF1-209ENST00000576012 GCNT2Q8N0V5 402 aa12.02□□□□□ -0.49
SCARF1-209ENST00000576012 DEFB123Q8N688 67 aa12.02□□□□□ -0.49
SCARF1-209ENST00000576012 MAFAQ8NHW3 353 aaPredicted RBP12.02□□□□□ -0.49
SCARF1-209ENST00000576012 OR8B2Q96RD0 313 aa12.02□□□□□ -0.49
SCARF1-209ENST00000576012 SFXN3Q9BWM7 321 aa12.02□□□□□ -0.49
SCARF1-209ENST00000576012 BDP1A6H8Y1 2624 aa12.02□□□□□ -0.49
SCARF1-209ENST00000576012 CA7P43166 264 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 FABP6P51161 128 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms