RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 CALRP27797 417 aaKnown RBP6.57□□□□□ -1.36
SMG6-218ENST00000575454 TAS2R31P59538 309 aa6.57□□□□□ -1.36
SMG6-218ENST00000575454 RELQ04864 619 aaPredicted RBP6.57□□□□□ -1.36
SMG6-218ENST00000575454 PVRIGQ6DKI7 326 aa6.57□□□□□ -1.36
SMG6-218ENST00000575454 SLC25A24Q6NUK1 477 aa6.57□□□□□ -1.36
SMG6-218ENST00000575454 CNIH2Q6PI25 160 aa6.57□□□□□ -1.36
SMG6-218ENST00000575454 POM121L12Q8N7R1 296 aa6.57□□□□□ -1.36
SMG6-218ENST00000575454 GDPD1Q8N9F7 314 aa6.57□□□□□ -1.36
SMG6-218ENST00000575454 ZBTB34Q8NCN2 500 aa6.57□□□□□ -1.36
SMG6-218ENST00000575454 RNF2Q99496 336 aa6.57□□□□□ -1.36
SMG6-218ENST00000575454 RHPN1-AS1Q9BWJ2 59 aa6.57□□□□□ -1.36
SMG6-218ENST00000575454 ACOT13Q9NPJ3 140 aa6.57□□□□□ -1.36
SMG6-218ENST00000575454 C21orf62Q9NYP8 219 aa6.57□□□□□ -1.36
SMG6-218ENST00000575454 TAS2R8Q9NYW2 309 aa6.57□□□□□ -1.36
SMG6-218ENST00000575454 LSM2Q9Y333 95 aaKnown RBP6.57□□□□□ -1.36
SMG6-218ENST00000575454 ETV7Q9Y603 341 aa6.57□□□□□ -1.36
SMG6-218ENST00000575454 IGHV4-4A0A075B6R2 117 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 IGKV1D-8A0A087WSZ0 117 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 TRAV14DV4A0A0A6YYC5 116 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 IGHV7-4-1A0A0J9YVY3 117 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 UPK2O00526 184 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 CHEK1O14757 476 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 NUPL2O15504 423 aaKnown RBP6.56□□□□□ -1.36
SMG6-218ENST00000575454 SERPINE2P07093 398 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 TRAPPC2P0DI81 140 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 TRAPPC2BP0DI82 140 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 MIFP14174 115 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 NQO2P16083 231 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 HLA-DMBP28068 263 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 TFPI2P48307 235 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 BRWD1-AS2P59051 145 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 ARPC4P59998 168 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 EIF4EBP1Q13541 118 aaPredicted RBP6.56□□□□□ -1.36
SMG6-218ENST00000575454 LGALS9BQ3B8N2 356 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 TIMM50Q3ZCQ8 353 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 SOHLH1Q5JUK2 328 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 HES5Q5TA89 166 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 LAIR2Q6ISS4 152 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 TMEM91Q6ZNR0 172 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 SPAG16Q8N0X2 631 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 TMEM116Q8NCL8 245 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 CHRDL1Q9BU40 450 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 CCDC90BQ9GZT6 254 aa6.56□□□□□ -1.36
SMG6-218ENST00000575454 PKD1P98161 4303 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 IGKV1D-13A0A0B4J2D9 117 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 CGB1A6NKQ9 187 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 PTGES3LE9PB15 166 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 ZNF207O43670 478 aaKnown RBP6.55□□□□□ -1.36
SMG6-218ENST00000575454 YIF1AO95070 293 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 HPRT1P00492 218 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 HSMCR30P0CW71 290 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 OR13C7P0DN81 318 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 IGKV1-13P0DP09 117 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 PLA2G7Q13093 441 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 CATR1Q13166 79 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 RCN1Q15293 331 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 POU2AF1Q16633 256 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 CDNFQ49AH0 187 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 Q56UQ5 140 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 HACD4Q5VWC8 232 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 Q8NAQ8 132 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 UBAC2Q8NBM4 344 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 SCARB1Q8WTV0 552 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 OR10C1Q96KK4 312 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 KRTAP4-5Q9BYR2 181 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 SCN3BQ9NY72 215 aa6.55□□□□□ -1.36
SMG6-218ENST00000575454 F11RQ9Y624 299 aaKnown RBP6.55□□□□□ -1.36
SMG6-218ENST00000575454 HSPG2P98160 4391 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 IGHV3OR16-8A0A075B7F1 116 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 TRAV2A0A0B4J234 112 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 IGHV4-28A0A0C4DH34 117 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 IFITM5A6NNB3 132 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 DNASE2O00115 360 aaPredicted RBP6.54□□□□□ -1.36
SMG6-218ENST00000575454 RTL8CO15255 209 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 SCGNO76038 276 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 AMBPP02760 352 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 EIF4EP06730 217 aaKnown RBP6.54□□□□□ -1.36
SMG6-218ENST00000575454 CTSGP08311 255 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 GNAO1P09471 354 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 RPS25P62851 125 aaKnown RBP6.54□□□□□ -1.36
SMG6-218ENST00000575454 ZNF124Q15973 351 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 MORN3Q6PF18 240 aaPredicted RBP6.54□□□□□ -1.36
SMG6-218ENST00000575454 Q6ZTC4 211 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 STHQ8IWL8 128 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 DUSP18Q8NEJ0 188 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 DMBX1Q8NFW5 382 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 OR1L8Q8NGR8 309 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 GIMAP1Q8WWP7 306 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 LSM10Q969L4 123 aaKnown RBP6.54□□□□□ -1.36
SMG6-218ENST00000575454 DGCR14Q96DF8 476 aaKnown RBP6.54□□□□□ -1.36
SMG6-218ENST00000575454 TXN2Q99757 166 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 GINS3Q9BRX5 216 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 NDUFAF3Q9BU61 184 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 ATG5Q9H1Y0 275 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 PLEKHA2Q9HB19 425 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 TMEM140Q9NV12 185 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 PLA2G2EQ9NZK7 142 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 ANXA10Q9UJ72 324 aa6.54□□□□□ -1.36
SMG6-218ENST00000575454 IGKV3-7A0A075B6H7 116 aa6.53□□□□□ -1.36
SMG6-218ENST00000575454 TRAV1-2A0A0B4J238 106 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms