RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 RBKSQ9H477 322 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 ANKRD11Q6UB99 2663 aaPredicted RBP5.52□□□□□ -1.53
SMG1-217ENST00000569764 A0A0U1RQV1 116 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 CEACAM18A8MTB9 384 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 MPPED1O15442 326 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 EIF4EP06730 217 aaKnown RBP5.52□□□□□ -1.53
SMG1-217ENST00000569764 C8orf88P0DMB2 117 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 PAX1P15863 534 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 ADAM8P78325 824 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 RPL24P83731 157 aaKnown RBP5.52□□□□□ -1.53
SMG1-217ENST00000569764 PRSS8Q16651 343 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 FAM162BQ5T6X4 162 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 FNDC7Q5VTL7 733 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 OTPQ5XKR4 325 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 LINC00114Q6XXX2 140 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 VKORC1L1Q8N0U8 176 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 SPATA3Q8NHX4 192 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 BET1LQ9NYM9 111 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 CACNA1CQ13936 2221 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 KALRNO60229 2985 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 C2CD3Q4AC94 2353 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 IGKV1D-42A0A075B6H8 117 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 DANCRP0C864 163 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 FAM157BP0CG42 384 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 TMEM267Q0VDI3 215 aaPredicted RBP5.52□□□□□ -1.53
SMG1-217ENST00000569764 KHDC3LQ587J8 217 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 H1FOOQ8IZA3 346 aaPredicted RBP5.52□□□□□ -1.53
SMG1-217ENST00000569764 ISG20L2Q9H9L3 353 aaKnown RBP5.52□□□□□ -1.53
SMG1-217ENST00000569764 EDA2RQ9HAV5 297 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 ZZEF1O43149 2961 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 A0A087WX48 190 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 H7C417 338 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 J3QRE1 110 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 MAS1P04201 325 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 GYPBP06028 91 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 MSMBP08118 114 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 JOSD1Q15040 202 aaPredicted RBP5.52□□□□□ -1.53
SMG1-217ENST00000569764 IAH1Q2TAA2 248 aaPredicted RBP5.52□□□□□ -1.53
SMG1-217ENST00000569764 SLC25A40Q8TBP6 338 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 TBX15Q96SF7 602 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 MGLLQ99685 303 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 TAF9BQ9HBM6 251 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 SIGLEC8Q9NYZ4 499 aa5.52□□□□□ -1.53
SMG1-217ENST00000569764 NFYBP25208 207 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 MEF2CQ06413 473 aaPredicted RBP5.51□□□□□ -1.53
SMG1-217ENST00000569764 TMEM78Q5T7P6 136 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 LEG1Q6P5S2 330 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 ATG5Q9H1Y0 275 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 SERTAD4Q9NUC0 356 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 PRNDQ9UKY0 176 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 SIGLEC7Q9Y286 467 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 FLVCR1Q9Y5Y0 555 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 NCKAP5O14513 1909 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 ZNF469Q96JG9 3925 aaPredicted RBP5.51□□□□□ -1.53
SMG1-217ENST00000569764 NAV2Q8IVL1 2488 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 IGKV3D-15A0A087WSY6 115 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 TRAV39A0A0B4J263 110 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 OR5B21A6NL26 309 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 COLCA2A8K830 154 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 FABP5P3A8MUU1 101 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 ATXN7L3Q14CW9 347 aaPredicted RBP5.51□□□□□ -1.53
SMG1-217ENST00000569764 UBE2V2Q15819 145 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 OR2T2Q6IF00 324 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 GLIPR1L1Q6UWM5 242 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 OR2T27Q8NH04 317 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 RPS4Y2Q8TD47 263 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 PRSS22Q9GZN4 317 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 OR52D1Q9H346 318 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 COX11Q9Y6N1 276 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 CACNA1DQ01668 2161 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 HSD52Q0P140 79 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 HES1Q14469 280 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 ANXA2RQ3ZCQ2 193 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 OR13A1Q8NGR1 328 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 C8orf46Q8TAG6 207 aa5.51□□□□□ -1.53
SMG1-217ENST00000569764 LOC107984640A0A0U1RRK4 108 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 DHRS3O75911 302 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 NDUFA7O95182 113 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 HNRNPA3P51991 378 aaKnown RBP5.5□□□□□ -1.53
SMG1-217ENST00000569764 CAV3P56539 151 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 ZNF92Q03936 586 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 PRDX4Q13162 271 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 SLC25A30Q5SVS4 291 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 TSPO2Q5TGU0 170 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 FER1L6-AS1Q8NA97 138 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 C5orf17Q8NAS9 161 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 TTTY10Q9BZA0 68 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 ANXA10Q9UJ72 324 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 LRRK2Q5S007 2527 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 YLPM1P49750 1951 aaKnown RBP5.5□□□□□ -1.53
SMG1-217ENST00000569764 CEP295Q9C0D2 2601 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 TRGV10A0A0A0MS01 117 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 IGHV3-15A0A0B4J1V0 119 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 PRR32B1ATL7 298 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 SLC2A2P11168 524 aaPredicted RBP5.5□□□□□ -1.53
SMG1-217ENST00000569764 MYOD1P15172 320 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 TMEM30BQ3MIR4 351 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 NR2C2APQ86WQ0 139 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 SLC22A24Q8N4F4 322 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 ARPC1AQ92747 370 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms